Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00172
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    25   0.90 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.90 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.4  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  RLAMLRYKQSGRLGRSRSAHTEHVLLRP 120
           +L +LR+ QSG L R    H    ++ P
Sbjct: 109 KLCLLRFSQSGNLNRHMRVHGAASMMPP 136


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  RLAMLRYKQSGRLGRSRSAHTEHVLLRP 120
           +L +LR+ QSG L R    H    ++ P
Sbjct: 365 KLCLLRFSQSGNLNRHMRVHGAASMMPP 392


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 595 CNCTFNYYSK 566
           CN TF++YSK
Sbjct: 220 CNLTFSWYSK 229


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 321 NSLNYNKIQNKTYMIKPLLI 380
           +S+   K++NK   +KPLLI
Sbjct: 92  DSVKNCKLKNKERKVKPLLI 111


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 648 LSNIDPFFLLYSQHLLIYNCNV*QH 722
           L+ +  F L+Y  H   Y C +  H
Sbjct: 135 LAAMTTFHLIYEAHGFSYKCGIQYH 159


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 648 LSNIDPFFLLYSQHLLIYNCNV*QH 722
           L+ +  F L+Y  H   Y C +  H
Sbjct: 131 LAAMTTFHLIYEAHGFSYKCGIQYH 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,844
Number of Sequences: 336
Number of extensions: 3271
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)