Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00171
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   3.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   3.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.5  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   7.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 1    GESSEHTNDNGSYGSGFEYVTQSADLPRNEIGKTV 105
            GE +EH  DNGS    +  VTQ + +P   +   V
Sbjct: 1844 GEGNEHEADNGSCYIPYNLVTQHS-IPDKSVADCV 1877


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +3

Query: 318 RSVQKSTEPN-AAPTQQSS--VDE-KQPDEETTRGSSQPTEA 431
           R+   +T+P+ AA T +SS  V++ +QP E+TT G++  T A
Sbjct: 19  RTSHTATKPSLAAVTAKSSAKVNQFQQPPEQTTGGNTSRTSA 60


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +3

Query: 318 RSVQKSTEPN-AAPTQQSS--VDE-KQPDEETTRGSSQPTEA 431
           R+   +T+P+ AA T +SS  V++ +QP E+TT G++  T A
Sbjct: 19  RTSHTATKPSLAAVTAKSSAKVNQFQQPPEQTTGGNTSRTSA 60


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 258 RQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSV 374
           R +P A      V  LK+K +  +K   P AAP    +V
Sbjct: 286 RGKPNAELLEEAVEALKKKYQEQRKKDRPEAAPAPAPTV 324


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 245 GFIRPPETNSSGRRTNCNTTQA*TSFGTKVNGA 343
           GF+       + +R+  +T  A ++FG+ VNGA
Sbjct: 85  GFVNNALNTDAIKRSMASTLGADSNFGSLVNGA 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,336
Number of Sequences: 2352
Number of extensions: 7519
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)