Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00171
(740 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF037470-1|AAD02099.1| 625|Drosophila melanogaster Rlip protein. 80 3e-15
AE014297-2906|AAF55832.1| 625|Drosophila melanogaster CG11622-P... 80 3e-15
AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p pro... 32 0.94
AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome... 32 0.94
AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA... 32 0.94
AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light p... 32 0.94
AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light r... 32 0.94
BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p pro... 31 1.6
AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA... 31 1.6
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 30 2.9
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 30 2.9
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 30 2.9
AY069161-1|AAL39306.1| 206|Drosophila melanogaster GH18955p pro... 30 3.8
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 30 3.8
AE014298-1376|AAF46527.3| 206|Drosophila melanogaster CG1468-PA... 30 3.8
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 30 3.8
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 29 6.6
>AF037470-1|AAD02099.1| 625|Drosophila melanogaster Rlip protein.
Length = 625
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +2
Query: 5 NQANIQTIMAAMGAALNMSLNLLTYLVTKSEKLFPNVRLTKYVPPLHSLPADFPDSAAEM 184
N+ N Q++ + L MS L+ L+ LF +V+L KYVPPL S PD+ ++
Sbjct: 332 NKLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQLIKYVPPLTSASPKLPDTPEDI 391
Query: 185 SAELRKQESLLSQIHAEMHAGFI 253
ELRKQ+SLLSQIH+EM+AGFI
Sbjct: 392 QTELRKQDSLLSQIHSEMNAGFI 414
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 288 RIVTQLKRKLRSVQKSTEPNAAPT-QQSSVDEKQPDEETTRGSSQPTEA 431
RI+TQLKRKLR+ +K E A SS E+TT T A
Sbjct: 427 RIITQLKRKLRTFEKKQEKTAEEVDNSSSAPPAVASEDTTDSKPAGTPA 475
>AE014297-2906|AAF55832.1| 625|Drosophila melanogaster CG11622-PA
protein.
Length = 625
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +2
Query: 5 NQANIQTIMAAMGAALNMSLNLLTYLVTKSEKLFPNVRLTKYVPPLHSLPADFPDSAAEM 184
N+ N Q++ + L MS L+ L+ LF +V+L KYVPPL S PD+ ++
Sbjct: 332 NKLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQLIKYVPPLTSTSPKLPDTPEDI 391
Query: 185 SAELRKQESLLSQIHAEMHAGFI 253
ELRKQ+SLLSQIH+EM+AGFI
Sbjct: 392 QTELRKQDSLLSQIHSEMNAGFI 414
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 288 RIVTQLKRKLRSVQKSTEPNAAPT-QQSSVDEKQPDEETTRGSSQPTEA 431
RI+TQLKRKLR+ +K E A SS E+TT T A
Sbjct: 427 RIITQLKRKLRTFEKKQEKTAEEVDNSSSAPPAVASEDTTDSKPAGTPA 475
>AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p
protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 NLLTYLVTKSEKLFPN-VRLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIH 229
+L+T V +++L P+ + +YVP L ++P +F MSAE ++Q L +H
Sbjct: 435 SLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVH 490
>AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome
protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 NLLTYLVTKSEKLFPN-VRLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIH 229
+L+T V +++L P+ + +YVP L ++P +F MSAE ++Q L +H
Sbjct: 435 SLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVH 490
>AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA
protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 NLLTYLVTKSEKLFPN-VRLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIH 229
+L+T V +++L P+ + +YVP L ++P +F MSAE ++Q L +H
Sbjct: 435 SLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVH 490
>AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light
photoreceptor protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 NLLTYLVTKSEKLFPN-VRLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIH 229
+L+T V +++L P+ + +YVP L ++P +F MSAE ++Q L +H
Sbjct: 435 SLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVH 490
>AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light
receptor protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 NLLTYLVTKSEKLFPN-VRLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIH 229
+L+T V +++L P+ + +YVP L ++P +F MSAE ++Q L +H
Sbjct: 435 SLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVH 490
>BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p protein.
Length = 1203
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 240 TPAS*GRQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEETTRGSSQ 419
TPA+ + RPTA G R V LKR+ S A QS+ Q ++ Q
Sbjct: 910 TPAA-SKHRPTASAGERKVISLKRRDDQDASSVRSRQAQGSQSNAQAGQGQQQQQAARKQ 968
Query: 420 PTEAE 434
T A+
Sbjct: 969 LTAAK 973
>AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA
protein.
Length = 1128
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 240 TPAS*GRQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEETTRGSSQ 419
TPA+ + RPTA G R V LKR+ S A QS+ Q ++ Q
Sbjct: 835 TPAA-SKHRPTASAGERKVISLKRRDDQDASSVRSRQAQGSQSNAQAGQGQQQQQAARKQ 893
Query: 420 PTEAE 434
T A+
Sbjct: 894 LTAAK 898
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 30.3 bits (65), Expect = 2.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 258 RQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEE 398
+QRP +LGGA + +L R S +T P+ T SV D+E
Sbjct: 509 QQRPVSLGGASTMPRLLRS-ESSASTTSPSRQLTNSGSVSVSVSDDE 554
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 30.3 bits (65), Expect = 2.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 258 RQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEE 398
+QRP +LGGA + +L R S +T P+ T SV D+E
Sbjct: 509 QQRPVSLGGASTMPRLLRS-ESSASTTSPSRQLTNSGSVSVSVSDDE 554
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 30.3 bits (65), Expect = 2.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 258 RQRPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEE 398
+QRP +LGGA + +L R S +T P+ T SV D+E
Sbjct: 509 QQRPVSLGGASTMPRLLRS-ESSASTTSPSRQLTNSGSVSVSVSDDE 554
>AY069161-1|AAL39306.1| 206|Drosophila melanogaster GH18955p
protein.
Length = 206
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 264 RPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEETTRGSSQPTEA 431
RPT T + + +TEP PT + + + E TT +++PTEA
Sbjct: 97 RPTTTTNPTTTTSRTTTTTTTEPTTEPTTEPTTEPTTE--PTTEPTTEPTTEPTEA 150
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 AQSCGNKNLFSVRSTRRCTPAS*GRQRPTALGGARIVTQLKR-KLRSVQKSTEPNAAPTQ 362
+QS NK++++V TPAS ++ P A Q++R +S TEP ++
Sbjct: 991 SQSAYNKSVYTVSQWPVTTPASMTKKVPGAFHSVTTPAQVQRPSSQSASVKTEPGSSAAV 1050
Query: 363 QSSVDEKQPD 392
++ PD
Sbjct: 1051 SDPCKKEVPD 1060
>AE014298-1376|AAF46527.3| 206|Drosophila melanogaster CG1468-PA
protein.
Length = 206
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 264 RPTALGGARIVTQLKRKLRSVQKSTEPNAAPTQQSSVDEKQPDEETTRGSSQPTEA 431
RPT T + + +TEP PT + + + E TT +++PTEA
Sbjct: 97 RPTTTTNPTTTTSRTTTTTTTEPTTEPTTEPTTEPTTE--PTTEPTTEPTTEPTEA 150
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 TYLVTKSEKLFPNVRLTKY--VPPLHSLPADFPDSAAEMSAELRKQESLLSQIHAEMHAG 247
+Y K+ + P V +K VP ++LP +A + +K S L Q H+G
Sbjct: 899 SYSPLKTMEKKPPVPTSKILNVPATYALPG-----SASGAVSFQKTSSYLPQASPHYHSG 953
Query: 248 FIRPPET 268
++RPP T
Sbjct: 954 YVRPPPT 960
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 116 RLTKYVPPLHSLPADFPDSAAEMSAELRKQESLLSQIHAEMHAGFIRPPETNSSGRRTNC 295
R KY+P +L F ++SAE KQ LS++ AE R P T R N
Sbjct: 938 RQAKYIPSTAALEERFNTLEKQLSAE--KQRKELSEMEAEYPIKSERIPSTADLESRFNS 995
Query: 296 NTTQ 307
T Q
Sbjct: 996 LTKQ 999
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,524,737
Number of Sequences: 53049
Number of extensions: 367426
Number of successful extensions: 1474
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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