Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00170
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochr... 26 0.33
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 25 0.76
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.76
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.76
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.1
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 7.1
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.1
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.1
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 7.1
>AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 125
Score = 25.8 bits (54), Expect = 0.33
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 572 ILTLIPSTPCLRSTCLVAVLTYHCKGLQSGS*VHL 468
+L L PS P + + ++TY L++GS VHL
Sbjct: 54 VLRLYPSVPFIARSLGEDIVTYSGHKLKAGSMVHL 88
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 24.6 bits (51), Expect = 0.76
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 259 CRIVC*KGGYSWPLRYRPGRISKIQA 336
CR+VC K G WP +P ++KI +
Sbjct: 61 CRLVCGKYGALWP---QPTSVTKISS 83
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.76
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 390 WNLVPVVVKLLYLASC 437
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.76
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 390 WNLVPVVVKLLYLASC 437
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 388 DETENTIASTTYSETSDKLVS*RFGLG 308
DET+N + TY+E +KL LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 388 DETENTIASTTYSETSDKLVS*RFGLG 308
DET+N + TY+E +KL LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 15 VNNISKKRKFVGDGVFKAELNEF 83
VNN S +R+F+ V E N F
Sbjct: 1915 VNNPSARRRFIAHVVDFIETNNF 1937
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 15 VNNISKKRKFVGDGVFKAELNEFL 86
+N++ K+R+ V + +FK E++E L
Sbjct: 75 LNDLEKRRE-VYESIFKVEVHEAL 97
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 15 VNNISKKRKFVGDGVFKAELNEFL 86
+N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 15 VNNISKKRKFVGDGVFKAELNEFL 86
+N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 422 QQLHNH--GHQIP**NGEHHSKHDVQRDL 342
Q ++NH GH + + +HH H Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 422 QQLHNH--GHQIP**NGEHHSKHDVQRDL 342
Q ++NH GH + + +HH H Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,519
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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