Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00170
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 167 2e-41
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 167 2e-41
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 167 2e-41
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 167 2e-41
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 167 2e-41
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 167 2e-41
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 167 2e-41
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 167 2e-41
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 166 7e-41
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 165 1e-40
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 162 9e-40
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 142 8e-34
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 142 8e-34
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 101 3e-21
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.31
BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 5... 30 6.7
BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 5... 30 6.7
BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein. 30 6.7
BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein. 30 6.7
AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 5... 30 6.7
L27428-1|AAB02291.1| 361|Homo sapiens reverse transcriptase pro... 30 8.8
BC003520-1|AAH03520.2| 225|Homo sapiens WDR32 protein protein. 30 8.8
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 141 bits (342), Expect = 2e-33
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 27 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 86
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 87 RGQRAKSMKFVDGLMIHSGDPVN 109
Score = 37.1 bits (82), Expect = 0.058
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 195 KGRRIRELTSVVQKRFNIPE 254
+GRRIRELT+VVQKRF PE
Sbjct: 6 QGRRIRELTAVVQKRFGFPE 25
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKI 573
P+ YV+TA RHVLLRQGV V +
Sbjct: 107 PVNYYVDTAVRHVLLRQGVWDTSVHL 132
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVN 164
Score = 142 bits (343), Expect = 1e-33
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 204 RIRELTSVVQKRFNIPE 254
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
Query: 676 TSE 684
SE
Sbjct: 222 ISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVN 164
Score = 142 bits (343), Expect = 1e-33
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 204 RIRELTSVVQKRFNIPE 254
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
Query: 676 TSE 684
SE
Sbjct: 222 ISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 167 bits (407), Expect = 2e-41
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 166 bits (403), Expect = 7e-41
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 165 bits (402), Expect = 1e-40
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCN 505
RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 676 TSE 684
SE
Sbjct: 223 ISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 162 bits (394), Expect = 9e-40
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = +2
Query: 266 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 445
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 446 RAKSMKFVDGLMIHSGDPCN 505
RAKSMKFVDGLMIHSGDP N
Sbjct: 61 RAKSMKFVDGLMIHSGDPVN 80
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 78 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 137
Query: 676 TSE 684
SE
Sbjct: 138 ISE 140
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 142 bits (345), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 70.9 bits (166), Expect = 4e-12
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 361
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 101 bits (241), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 37 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 96
Query: 676 TSE 684
SE
Sbjct: 97 ISE 99
Score = 81.4 bits (192), Expect = 3e-15
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 389 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN 505
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVN 39
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 34.7 bits (76), Expect = 0.31
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 531 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNGAQGRARAPR 671
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 556 GIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
GI V+ + P+ Q K+GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 556 GIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
GI V+ + P+ Q K+GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein.
Length = 176
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 556 GIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
GI V+ + P+ Q K+GP PQP I P P P P
Sbjct: 113 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 149
>BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein.
Length = 228
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 556 GIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
GI V+ + P+ Q K+GP PQP I P P P P
Sbjct: 165 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 201
>AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 556 GIKVKIMLPWDQQGKSGPKKPQPDHILVTEPKDEPVPLEP 675
GI V+ + P+ Q K+GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>L27428-1|AAB02291.1| 361|Homo sapiens reverse transcriptase
protein.
Length = 361
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 635 RMWSGCGFFGPLLPCWSHGNMILTL 561
R W GCG G LL CW + ++ L
Sbjct: 215 RCWRGCGEIGTLLHCWWNCKLVQPL 239
>BC003520-1|AAH03520.2| 225|Homo sapiens WDR32 protein protein.
Length = 225
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 327 LRDSAWAIAQRPRVATFSAYNSTDSLEC*IASVLRK*AHGFCVLSLRAHSVSW 169
L ++ I + R + S + +SLE VL + HG C+ SL+ H W
Sbjct: 37 LEVGSYPILRARRTTSSSGVSPRNSLEVVTPEVLGESDHGNCITSLQLHPKGW 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,744,169
Number of Sequences: 237096
Number of extensions: 2492133
Number of successful extensions: 11401
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11398
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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