Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00169
(381 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 142 3e-34
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 142 3e-34
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 142 3e-34
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 142 3e-34
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 142 3e-34
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 142 3e-34
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 142 3e-34
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 142 3e-34
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 142 4e-34
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 142 4e-34
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 141 6e-34
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 85 1e-16
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 79 4e-15
BC003520-1|AAH03520.2| 225|Homo sapiens WDR32 protein protein. 30 2.9
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 29 3.8
BC127685-1|AAI27686.1| 185|Homo sapiens calcium and integrin bi... 29 3.8
BC127684-1|AAI27685.1| 185|Homo sapiens calcium and integrin bi... 29 3.8
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 29 3.8
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 29 3.8
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 29 3.8
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 29 3.8
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 29 3.8
AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens ... 29 3.8
AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens ... 29 3.8
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 29 3.8
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 29 3.8
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 82.6 bits (195), Expect = 4e-16
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVL 123
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 257 SVELYAEKVATRG 295
SVELYAEKVATRG
Sbjct: 83 SVELYAEKVATRG 95
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 361
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 83.0 bits (196), Expect = 3e-16
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 142 bits (345), Expect = 3e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 142 bits (343), Expect = 4e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 204 RIRELTSVVQKRFNIPE 254
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 122
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 142 bits (343), Expect = 4e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 204 RIRELTSVVQKRFNIPE 254
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 122
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 141 bits (342), Expect = 6e-34
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 84.6 bits (200), Expect = 1e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 27 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 67
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 195 KGRRIRELTSVVQKRFNIPE 254
+GRRIRELT+VVQKRF PE
Sbjct: 6 QGRRIRELTAVVQKRFGFPE 25
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 79.4 bits (187), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 266 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 379
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 38
>BC003520-1|AAH03520.2| 225|Homo sapiens WDR32 protein protein.
Length = 225
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 327 LRDSAWAIAQRPRVATFSAYNSTDSLEC*IASVLRK*AHGFCVLSLRAHSVSW 169
L ++ I + R + S + +SLE VL + HG C+ SL+ H W
Sbjct: 37 LEVGSYPILRARRTTSSSGVSPRNSLEVVTPEVLGESDHGNCITSLQLHPKGW 89
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC127685-1|AAI27686.1| 185|Homo sapiens calcium and integrin
binding family member 4 protein.
Length = 185
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 160 LWPPGHRVCSERKDAESVSSLP*YRSDSTFQRICRIVC*KGGYSW 294
L PPG + VSSLP R + RICR+ KG +S+
Sbjct: 38 LCPPGKYYKEATLTMDQVSSLPALRVNPFRDRICRVFSHKGMFSF 82
>BC127684-1|AAI27685.1| 185|Homo sapiens calcium and integrin
binding family member 4 protein.
Length = 185
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 160 LWPPGHRVCSERKDAESVSSLP*YRSDSTFQRICRIVC*KGGYSW 294
L PPG + VSSLP R + RICR+ KG +S+
Sbjct: 38 LCPPGKYYKEATLTMDQVSSLPALRVNPFRDRICRVFSHKGMFSF 82
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ45222 fis, clone BRCAN2019953. ).
Length = 177
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 91 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 189
GSWPR + P + S PS ++L LW R+ S
Sbjct: 83 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 116
>AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ45020 fis, clone BRAWH3016123. ).
Length = 206
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 91 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 189
GSWPR + P + S PS ++L LW R+ S
Sbjct: 112 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 145
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 254 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 126
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,033,257
Number of Sequences: 237096
Number of extensions: 1092919
Number of successful extensions: 2655
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -