Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00169
(381 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 4.9
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 6.5
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 6.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 8.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 8.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 8.5
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 155 DLRADGSDPHFH 120
++ DGS PHFH
Sbjct: 621 EISQDGSSPHFH 632
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 2.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 170 QDTECARRERTQ 205
QD +C R+ERTQ
Sbjct: 1646 QDHDCIRQERTQ 1657
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 143 PLGDHYYGHQDTECARRERT 202
PL +H Y D++ + ERT
Sbjct: 1329 PLSEHIYSSIDSDYSTLERT 1348
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 4.9
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -3
Query: 223 EVSSRILRPFSPSTLCVLVA 164
++ +++ F+PSTL V+++
Sbjct: 198 QIGHHLIQTFAPSTLVVMLS 217
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -2
Query: 170 GGHNNDLRADGSDPHFHAGVAV 105
G N L ++ +DP AG+ +
Sbjct: 117 GDEENGLTSESTDPGLVAGIVI 138
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -2
Query: 170 GGHNNDLRADGSDPHFHAGVAV 105
G N L ++ +DP AG+ +
Sbjct: 88 GDEENGLTSESTDPGLVAGIVI 109
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 170 QDTECARRERTQNP*AHFRSTEAIQHSRE 256
+D+E R RTQ R IQ RE
Sbjct: 21 EDSETGLRSRTQEERLRRRREWMIQQERE 49
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,830
Number of Sequences: 438
Number of extensions: 1811
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9300375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -