Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00168
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 105 4e-23
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.009
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 38 0.009
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 36 0.037
AC024817-5|ABQ13054.1| 274|Caenorhabditis elegans Hypothetical ... 35 0.065
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.80
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 31 0.80
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 31 0.80
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 31 0.80
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 31 0.80
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 31 0.80
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 31 0.80
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 31 0.80
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 31 0.80
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 31 1.1
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 31 1.1
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 1.1
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 31 1.1
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 30 1.4
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 30 1.9
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.9
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 30 1.9
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 30 1.9
AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine r... 30 1.9
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 30 1.9
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 29 2.4
U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 29 2.4
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 2.4
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 29 2.4
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.3
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 29 4.3
U41508-8|AAG00026.4| 553|Caenorhabditis elegans Abnormal catech... 29 4.3
U41508-7|AAP46273.2| 490|Caenorhabditis elegans Abnormal catech... 29 4.3
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 4.3
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 4.3
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 4.3
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 4.3
AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 28 5.7
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 28 7.5
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 28 7.5
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 27 9.9
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 27 9.9
U40956-3|AAA81758.1| 109|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 27 9.9
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 27 9.9
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 105 bits (251), Expect = 4e-23
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Frame = +3
Query: 243 QKCECWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT- 419
++ WDLA+NQ V HD PVKTCHWI NY CLMT S+DKTL+FWD + +P+ T
Sbjct: 111 KEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKN-LPNQTQ 169
Query: 420 ---LNLTERAYCADVEYPMAVVGTADRGICMY 506
+ L ER Y ADV YPMAVV A++ I +Y
Sbjct: 170 MAQIQLPERVYAADVLYPMAVVALANKHIKVY 201
Score = 102 bits (244), Expect = 3e-22
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = +2
Query: 512 EGKPAEFKRIESPLKHQHRCVSIFKDKKSKQPTGFALGSVEGRVAIQYVNPTNPKDNFTF 691
E P E K IES LK Q RC+SIFKDK ++ P GFALGS+EGRVA+QYV+ NPKDNFTF
Sbjct: 204 ENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQYVDVANPKDNFTF 263
Query: 692 KCHR 703
KCHR
Sbjct: 264 KCHR 267
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +1
Query: 4 NKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDG 183
N D V P+DT+ ++FSP L GSWD +R W + KA Q +
Sbjct: 32 NDDFLVDGAPEDTIQVIKFSPTPQD-KPMLACGSWDGTIRVWMFNDANTFEGKAQQNIPA 90
Query: 184 PVLDVAWHDDGTKVFMASTDKSVNV 258
P+LD+AW +D +K+F+A DK +
Sbjct: 91 PILDIAWIEDSSKIFIACADKEARL 115
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +2
Query: 542 ESPLKHQHRCVSIFKDKKSKQPTG--FALGSVEGRVAIQYVNPTNP---KDNFTFKCHR 703
+SPLK+Q R V F PTG F + S+EGRVA++YV+ + K + FKCHR
Sbjct: 190 DSPLKYQTRAVQFF-------PTGEAFVVSSIEGRVAVEYVDQSGEEMMKRKYAFKCHR 241
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 DLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSM--TLNLTE 434
D+ Q+ +H V+ + P + +++ WD ++K WD R+ ++N++
Sbjct: 96 DIETGNGTQLGSHALAVRCMEF--NPMSSLIVSGGWDSSVKLWDARSYGNGAIESVNVSS 153
Query: 435 RAYCADVEYPMAVVGTADRGICMY 506
Y DV +VGT DR I MY
Sbjct: 154 SVYAMDVLKHTILVGTKDRKIFMY 177
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 43 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSG 147
V +EF+P S + +++G WD V+ W+ + G
Sbjct: 112 VRCMEFNPMS----SLIVSGGWDSSVKLWDARSYG 142
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 282 MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
M++ H APV C W+ ++T SWD+T WD
Sbjct: 274 MRLTGHRAPVSCCEWLAGGQQ--MVTASWDRTANVWD 308
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 282 MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
M++ H APV C W+ ++T SWD+T WD
Sbjct: 272 MRLTGHRAPVSCCEWLAGGQQ--MVTASWDRTANVWD 306
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 88 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
F ++GSWD +R W++ T + D VL VA+ D ++ S DKS+ +
Sbjct: 83 FALSGSWDKTLRLWDLNQGVSTRQFISHTKD--VLSVAFSADNRQIVSGSRDKSIKL 137
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 354 MTTSWDKTLKFWDTRTAVP-----SMTLNLTERAYCADVEYPMAVVGTADRGICMY 506
++ SWDKTL+ WD V S T ++ A+ AD V G+ D+ I ++
Sbjct: 85 LSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR--QIVSGSRDKSIKLW 138
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 28 PPDDTVSALEFSPPSVTLHTFLIAGS--WDCQVRCWEVETSGKTVPKAAQPMDGP-VLDV 198
P +D ++A+ FSP L + + WD + + E + + P + +
Sbjct: 237 PGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISL 296
Query: 199 AWHDDGTKVFMASTDKSVNV 258
AW DG +F TD + V
Sbjct: 297 AWSQDGQTLFAGYTDNIIRV 316
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 231 GFNRQKCECWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSW---DKTLKFWDTR 398
G N + W+L N+ +Q H+A VK W +P++ L+ + D+ L+FW+T
Sbjct: 540 GGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAW--SPHHHGLLVSGGGTADRCLRFWNTL 597
Query: 399 TAVP 410
TA P
Sbjct: 598 TAQP 601
>AC024817-5|ABQ13054.1| 274|Caenorhabditis elegans Hypothetical
protein Y54G2A.12 protein.
Length = 274
Score = 34.7 bits (76), Expect = 0.065
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 70 SVTLHTF-LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDK 246
S TLH + S D +++ WEV + V + PV +VA++++GT+ AS D+
Sbjct: 182 SSTLHLKETVDYSMDTKIKLWEVYDRQRVV-RTYSGHKLPVREVAFNNEGTEFLSASFDR 240
Query: 247 SVNVG 261
VN G
Sbjct: 241 YVNTG 245
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 231 GFNRQKCECWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
GF +Q + + TM + H+ + T + +P+ TCL T+ +D+ + FW+
Sbjct: 15 GFPQQTAQRFSNLMAPTMVLLGHEGEIYTGAF--SPDGTCLATSGYDQKIFFWN 66
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 37 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEV 135
DT++ + SP F+I+ S DC VR W++
Sbjct: 208 DTITGISLSPSG----KFIISNSMDCTVRQWDI 236
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 188 PLDPPIKSVNWHFDGRQILTGNVDGSISL 216
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 188 PLDPPIKSVNWHFDGRQILTGNVDGSISL 216
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 223 PLDPPIKSVNWHFDGRQILTGNVDGSISL 251
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 223 PLDPPIKSVNWHFDGRQILTGNVDGSISL 251
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 223 PLDPPIKSVNWHFDGRQILTGNVDGSISL 251
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 188 PLDPPIKSVNWHFDGRQILTGNVDGSISL 216
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 172 PMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
P+D P+ V WH DG ++ + D S+++
Sbjct: 223 PLDPPIKSVNWHFDGRQILTGNVDGSISL 251
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 WDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTT-SWDKTLKFWDTRTAVPSMTLNLTE 434
W + AN + H V+ W +P T L+ + S D ++K WDTR+A + +
Sbjct: 264 WAVGANP---LTGHKKSVEDLAW--SPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQ 318
Query: 435 RAYCADV 455
+A+ +DV
Sbjct: 319 KAHESDV 325
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 91 LIAGSWDCQVRCWEVETSGKTVPKAA-QPMDGPVLDVAWHDDGTKVFMAS 237
+++G D +++ W ++T P A + + P+ V WH T FMAS
Sbjct: 337 IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMAS 386
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 181 GPVLDVAWHDDGTKVFMASTDKSVNV 258
G V + W DGTK+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 273 NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTER 437
+ +++ AH V W +P+ T + + S DKT+K W+ T T+ + R
Sbjct: 230 DDSLKNVAHSGSVFGLTW--SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 181 GPVLDVAWHDDGTKVFMASTDKSVNV 258
G V + W DGTK+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 273 NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTER 437
+ +++ AH V W +P+ T + + S DKT+K W+ T T+ + R
Sbjct: 230 DDSLKNVAHSGSVFGLTW--SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 88 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVNV 258
FLI GS D V+ W+V T+GK + + M PV +A + V +A D+++ V
Sbjct: 1009 FLITGSGDFVVQMWDV-TNGKCISRMGGLM-APVSTLAITSNDAFVVVACEDETLKV 1063
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 181 GPVLDVAWHDDGTKVFMASTDKSVNV 258
G V + W DGTK+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 273 NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTER 437
+ +++ AH V W +P+ T + + S DKT+K W+ T T+ + R
Sbjct: 230 DDSLKNVAHSGSVFGLTW--SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 37 DTVSALEFSPPSVTLH-TFLIAGSWDCQVRCWE-VETSGKTVPKAAQPMD 180
D +S E + S+ +H +++GSWD ++ W V++ +TV + + +D
Sbjct: 482 DILSGHESAISSIDIHGNHIVSGSWDRTIKMWTIVDSQAETVEVSHEALD 531
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 551 LKHQHRCVSIFKDKKSKQPTGFALGSV 631
LK Q+R + D+KSK TG+ LG +
Sbjct: 205 LKRQYRSIQFNSDEKSKMRTGYLLGQI 231
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 93 DRWQLGLPSEMLGSGNFGEN---SA*GCTAYGWTGPRCRLA**WDEGFYGFNRQKC 251
D L P + G NF +N CT+ GW G C + D Y N KC
Sbjct: 1683 DMCSLNNPCQQNGYCNFNQNIGDEICDCTSSGWLGDHCEIQPKLDNCLYCQNSVKC 1738
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 40 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE 138
+V A++ SP H FL +G D QV+CW++E
Sbjct: 228 SVRAVKVSPR----HPFLFSGGEDKQVKCWDLE 256
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +3
Query: 258 WDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLN-LTE 434
WD A+ ++ +PN L++ D +LK WD + A P N
Sbjct: 366 WDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKN 425
Query: 435 RAYC--ADVEYPM 467
+ YC A++ P+
Sbjct: 426 KKYCLFANMSVPL 438
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 40 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE 138
+V A++ SP H FL +G D QV+CW++E
Sbjct: 228 SVRAVKVSPR----HPFLFSGGEDKQVKCWDLE 256
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 FYGFNRQKCECWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
F G++ C WD + V A HD V +C + + T SWD LK W+
Sbjct: 286 FAGYDDFNCNVWDSMRQERAGVLAGHDNRV-SCLGVTEDGMA-VCTGSWDSFLKIWN 340
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 FYGFNRQKCECWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
F G++ C WD + V A HD V +C + + T SWD LK W+
Sbjct: 286 FAGYDDFNCNVWDSMRQERAGVLAGHDNRV-SCLGVTEDGMA-VCTGSWDSFLKIWN 340
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 FYGFNRQKCECWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
F G++ C WD + V A HD V +C + + T SWD LK W+
Sbjct: 286 FAGYDDFNCNVWDSMRQERAGVLAGHDNRV-SCLGVTEDGMA-VCTGSWDSFLKIWN 340
>AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine
receptor, class i protein4 protein.
Length = 355
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 243 QKCECWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLK 383
Q + DLAA ++AH A +C + NY L T ++D K
Sbjct: 278 QMTQLHDLAATAPFFISAHSAVTTSCLIMTTANYKNLFTKNYDNVRK 324
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/47 (25%), Positives = 18/47 (38%)
Frame = +3
Query: 258 WDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 398
WD + H P+K+C + + N C T K L + R
Sbjct: 79 WDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNLSTFQVR 125
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 231 GFNRQKCECWDLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAV 407
G + + WDL + T + AH + V A Y L++ S+D TLK W T
Sbjct: 398 GSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQY--LVSASFDCTLKMWSTTGWQ 455
Query: 408 PSMTLNLTE-RAYCADV 455
P L + R C D+
Sbjct: 456 PLRQLQGHDTRILCVDI 472
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 WDLAANQT-MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 398
WD+ + M + H + + W+ PN ++T S D ++K WD R
Sbjct: 365 WDMRTGRCIMFLDGHTKEIHSVEWM--PNGYEMITGSSDNSMKVWDLR 410
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +1
Query: 16 EVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLD 195
E+ + ++S ++FSP ++ +GS DC ++ W ++ K + +
Sbjct: 101 EIPNAHKKSISGIKFSPDG----RYMGSGSADCSIKIWRMDF---VYEKTLMGHRLGINE 153
Query: 196 VAWHDDGTKVFMASTDKSVNV 258
+W D + S DK V V
Sbjct: 154 FSWSSDSKLIVSCSDDKLVKV 174
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 PNKDVEVSSPPDDTVSALEFSPPSV--TLHTFLIAGSWDCQVRCWEVETSGKTV 156
P K E +T +PPS + H L++ S+D +R W++ T GK +
Sbjct: 22 PEKSFETEKHFQNTNQVPTEAPPSFDPSPHALLVSASYDLTIRLWQLST-GKCI 74
>U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical
protein T05B11.1 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 336 PNYTCLMTTSWDKTLKFWDTRTAVPS 413
P Y C + D+TL W TRT P+
Sbjct: 209 PRYPCFLNEVTDQTLIHWATRTTAPN 234
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 261 DLAANQTMQ-VAAHDAPVKTCH-WIKAPNYTCLMTTSWDKTLKFWDTR 398
D Q +Q + H AP+ + W +A N ++ S DKT++FWD R
Sbjct: 493 DCNTGQLIQSMKGHTAPILGLYTWSQAGNQ--FVSCSQDKTIRFWDLR 538
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 261 DLAANQTMQ-VAAHDAPVKTCH-WIKAPNYTCLMTTSWDKTLKFWDTR 398
D Q +Q + H AP+ + W +A N ++ S DKT++FWD R
Sbjct: 759 DCNTGQLIQSMKGHTAPILGLYTWSQAGNQ--FVSCSQDKTIRFWDLR 804
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 261 DLAANQTMQ-VAAHDAPVKTCH-WIKAPNYTCLMTTSWDKTLKFWDTR 398
D Q +Q + H AP+ + W +A N ++ S DKT++FWD R
Sbjct: 759 DCNTGQLIQSMKGHTAPILGLYTWSQAGNQ--FVSCSQDKTIRFWDLR 804
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 258 WDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 392
WD A Q ++ D +PN ++ ++ D TLK WD
Sbjct: 240 WDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 586 GQEEQAADRLRAGQRGRPRGHPVREPDQPQGQLHVQVPP 702
GQ++Q +R++ Q+ + +G V++P P GQ + +PP
Sbjct: 691 GQQQQQQERMQMMQQQQQQGQMVQQPGYP-GQGYPGMPP 728
>U41508-8|AAG00026.4| 553|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 1, isoform a protein.
Length = 553
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 604 LLALLVLEDGDAAVLVLQRRLDALELGGLALQVYMQMPRSAVPTTAI 464
LLALL L DG +VLQ ++D E G +++ + P V AI
Sbjct: 283 LLALLALFDGSIQFMVLQPKIDRGEPEGSSIKQLAKDPYIIVAAGAI 329
>U41508-7|AAP46273.2| 490|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 1, isoform b protein.
Length = 490
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 604 LLALLVLEDGDAAVLVLQRRLDALELGGLALQVYMQMPRSAVPTTAI 464
LLALL L DG +VLQ ++D E G +++ + P V AI
Sbjct: 220 LLALLALFDGSIQFMVLQPKIDRGEPEGSSIKQLAKDPYIIVAAGAI 266
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 94 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVA 201
+ S D +V W E++G+T PKA +D PV +A
Sbjct: 673 VTASRDQKVIVW-AESAGQTAPKATVKLDEPVTAIA 707
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 222 GFYGFN-RQKCECWDLAANQTMQVAAHDAPVKTC 320
G++G++ QKC C D+A+ +V H TC
Sbjct: 801 GYFGYDCEQKCSCADVASPHKSKVCHHVTGTCTC 834
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 222 GFYGFN-RQKCECWDLAANQTMQVAAHDAPVKTC 320
G++G++ QKC C D+A+ +V H TC
Sbjct: 801 GYFGYDCEQKCSCADVASPHKSKVCHHVTGTCTC 834
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +1
Query: 43 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 222
V+ + FSP + ++ + S+D V+ W T GK + + GPV VAW D
Sbjct: 363 VNQVVFSPDT----RYIASASFDKSVKLWCGRT-GKYLASLRGHV-GPVYQVAWSADSRL 416
Query: 223 VFMASTDKSVNV 258
+ S D ++ V
Sbjct: 417 LVSGSADSTLKV 428
>AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical
protein Y73B3B.1 protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 445 QYALSVRLRVMLGTAVRVSQNFR 377
+Y++ R+RVM G+A VS +FR
Sbjct: 6 EYSIEERVRVMFGSAAEVSNDFR 28
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 237 NRQKCECWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSM 416
++++ W +T ++ H P+ I P +T + + S D T+K WD T
Sbjct: 85 DKRQAADWIPRPPETQKLTGHRLPITRV--IFHPLWTIMASCSEDATIKVWDYETGQLER 142
Query: 417 TL 422
TL
Sbjct: 143 TL 144
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = +1
Query: 88 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV 225
+ +G +R W+ S + GPV D+AW + ++
Sbjct: 73 YCASGDTQGNIRIWDTTQSTHILKHTIPVFSGPVKDIAWDSESKRI 118
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +3
Query: 357 TTSWDKTLKFWDTRTAVPSMTLNLTERAY-CADV----EYPMAVVGTAD 488
T S DKT+K W + VP+ TL E+ C D E P + G D
Sbjct: 160 TASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADD 208
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 219 EGFYGFNRQKCECWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 395
+ FY +RQ+ + W QT+ A H A V + + N ++ S D+T++ W
Sbjct: 76 KSFYAMHRQR-DRWRAWETQTVITAPGHSATVDSVMLFENNNKQFCLSGSRDRTIRLWSI 134
Query: 396 RTA 404
A
Sbjct: 135 ENA 137
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 237 NRQKCECWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSM 416
++++ W +T ++ H P+ I P +T + + S D T+K WD T
Sbjct: 85 DKRQAADWIPRPPETQKLTGHRLPITRV--IFHPLWTIMASCSEDATIKVWDYETGQLER 142
Query: 417 TL 422
TL
Sbjct: 143 TL 144
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 583 QGQEEQAADRLRAGQRGRPRGHPVREPDQP 672
Q Q++Q + +G++ RP+ HP +P P
Sbjct: 390 QQQQQQPQQQQFSGEQSRPQSHPNSQPTTP 419
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 583 QGQEEQAADRLRAGQRGRPRGHPVREPDQP 672
Q Q++Q + +G++ RP+ HP +P P
Sbjct: 715 QQQQQQPQQQQFSGEQSRPQSHPNSQPTTP 744
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +3
Query: 324 WIKAPNYTCLMTT-----SWDKTLKFWDTRTAVPSM--TLNLTERAYCADVEYPMAVVGT 482
W++A + L T S DKT K WD R++ S+ +R CA + G+
Sbjct: 369 WVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEGLIATGS 428
Query: 483 AD 488
AD
Sbjct: 429 AD 430
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 583 QGQEEQAADRLRAGQRGRPRGHPVREPDQP 672
Q Q++Q + +G++ RP+ HP +P P
Sbjct: 715 QQQQQQPQQQQFSGEQSRPQSHPNSQPTTP 744
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 QKCECWDLAANQTMQVAA-HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 398
+K WDL ++ A H A V + Y L T S DKT+ WD R
Sbjct: 244 RKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYI-LATGSVDKTVALWDMR 295
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 247 FCLLKP*KPSSHHHARRHLGPVH 179
FC +KP P H RRH G H
Sbjct: 629 FCCMKPPYPGIHGSLRRHCGVPH 651
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 247 FCLLKP*KPSSHHHARRHLGPVH 179
FC +KP P H RRH G H
Sbjct: 629 FCCMKPPYPGIHGSLRRHCGVPH 651
>U40956-3|AAA81758.1| 109|Caenorhabditis elegans Hypothetical
protein ZK402.2 protein.
Length = 109
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 442 YALSVRLRVMLGTAVRVSQNF 380
Y++ RLRVMLG A +VS +F
Sbjct: 86 YSIESRLRVMLGLAGKVSDDF 106
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 563 HRCVSIFKDKKSKQPTGFALGSVEGRVAIQYVNPTN 670
H + +FKDKK K G+ VE Q V+ N
Sbjct: 458 HASICLFKDKKMKSAKGYDGRKVECNTCFQAVHAEN 493
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 246 KCECWDLAANQTM--QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 419
K + W++ Q + A H PV+ + T ++ S+D+ +K WDT T
Sbjct: 299 KIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEG--TEFLSASFDRYVKLWDTETGQVKQR 356
Query: 420 LNLTERAYC 446
+ YC
Sbjct: 357 FHTGHVPYC 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,278,064
Number of Sequences: 27780
Number of extensions: 358568
Number of successful extensions: 1288
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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