Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00167
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 100 ITLKPILKECEASPTMIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAF-RVNVIMLASR 270
           ITL+  +  C  S  ++       H   +L+S +YR   + G  AVD+  RV V+   SR
Sbjct: 3   ITLQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAAGSR 62


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +2

Query: 527 LKTFITQQGIKSASKEEQAQITSQVTGQIGWRRESIKYRRNELFL-DVLE--YVHLLMSP 697
           L + +T+    + +  +Q Q  + V G   WR  + KY R  + L   +E  Y H++ +P
Sbjct: 227 LGSMMTENKASTFNMNKQQQRLTGVHGGCPWRPPNFKYGRGIIGLHQEIEQFYAHMIATP 286


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 166  YNHKGEVLISRVYRDDIGRN 225
            YNH  E ++  V+ + IGRN
Sbjct: 1710 YNHVAESILHAVHDEPIGRN 1729


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -2

Query: 353 LCDCCQPNICTLDM--EERCAC 294
           LC CC+ + C  +M     CAC
Sbjct: 779 LCHCCEFDACDCEMTCPNNCAC 800


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 226 HYDQYHLGRLSRSTPRLYGCKRTSLRSL 143
           HY Q+H           Y C RT ++SL
Sbjct: 762 HYAQHHFNSQGSRKAEPYYCDRTLVQSL 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,128
Number of Sequences: 2352
Number of extensions: 16713
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)