Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00167
(771 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.78
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 4.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 7.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 7.3
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 22 7.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.6
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.0 bits (52), Expect = 0.78
Identities = 11/54 (20%), Positives = 25/54 (46%)
Frame = +2
Query: 533 TFITQQGIKSASKEEQAQITSQVTGQIGWRRESIKYRRNELFLDVLEYVHLLMS 694
T ++ QGI E ++++ T + WR + F+ + Y+ +L++
Sbjct: 373 TKLSSQGILGEDVENNSEVSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILIT 426
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 677 HTLVHQGTARFVCT*CFHGASQSDQLLV 594
H H G +VC C G + S QL V
Sbjct: 194 HMRTHTGEKPYVCKACGKGFTCSKQLKV 221
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 677 HTLVHQGTARFVCT*CFHGASQSDQLLV 594
H +H G CT C QS QL++
Sbjct: 166 HMRIHTGERPHKCTVCSKTFIQSGQLVI 193
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 5/27 (18%)
Frame = -1
Query: 729 PSHVSR-----EHLTCGDINKWTYSST 664
P HV R E T DIN+W Y T
Sbjct: 275 PFHVQRLLYVYEDSTYDDINQWVYPLT 301
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -2
Query: 353 LCDCCQPNICTLDMEERCACNVGN 282
LC CC + C +M C N
Sbjct: 746 LCHCCDFDACDCEMTCPAGCKCYN 769
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 698 QVKCSLLTWLGKW 736
+V C +L+W KW
Sbjct: 61 RVTCDVLSWQSKW 73
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 280 GDRTCWRA*SHSL*MRPQHYDQYH 209
G+R+C R S + + YDQ H
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQLH 272
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -2
Query: 371 GRVHILLCDCCQPNICTLDMEERCACNV 288
G I+ C C PN CT C +
Sbjct: 420 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 447
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -2
Query: 371 GRVHILLCDCCQPNICTLDMEERCACNV 288
G I+ C C PN CT C +
Sbjct: 406 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 433
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -2
Query: 371 GRVHILLCDCCQPNICTLDMEERCACNV 288
G I+ C C PN CT C +
Sbjct: 440 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 467
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -2
Query: 371 GRVHILLCDCCQPNICTLDMEERCACNV 288
G I+ C C PN CT C +
Sbjct: 389 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 416
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +2
Query: 632 IKYRRNELFLDVLEYVHLLMSPQVKCSLLTWLGKW 736
++ + + +D +++ L M P+ K +WL K+
Sbjct: 374 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKF 408
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +2
Query: 632 IKYRRNELFLDVLEYVHLLMSPQVKCSLLTWLGKW 736
++ + + +D +++ L M P+ K +WL K+
Sbjct: 374 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKF 408
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 442 FSSEILPKYDC 410
+S ++ PKYDC
Sbjct: 407 YSRDVRPKYDC 417
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 442 FSSEILPKYDC 410
+S ++ PKYDC
Sbjct: 407 YSRDVRPKYDC 417
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 442 FSSEILPKYDC 410
+S ++ PKYDC
Sbjct: 407 YSRDVRPKYDC 417
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,900
Number of Sequences: 438
Number of extensions: 4247
Number of successful extensions: 28
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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