Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00166
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q63FZ8 Cluster: Group-specific protein; n=11; Bacillus ... 39 0.13
UniRef50_Q1ASU9 Cluster: GAF sensor signal transduction histidin... 36 1.2
UniRef50_UPI0000E49FF4 Cluster: PREDICTED: similar to KIAA0467 p... 35 1.6
UniRef50_UPI00015B4AC1 Cluster: PREDICTED: similar to conserved ... 34 2.8
UniRef50_Q03YT4 Cluster: Leucyl aminopeptidase; n=1; Leuconostoc... 33 4.9
UniRef50_A5P3I0 Cluster: Inner-membrane translocator; n=3; Alpha... 33 4.9
UniRef50_Q8TF72 Cluster: Protein Shroom3; n=8; Eutheria|Rep: Pro... 33 4.9
UniRef50_UPI0000ECBAEF Cluster: UPI0000ECBAEF related cluster; n... 33 6.5
UniRef50_A7CRY4 Cluster: Integral membrane sensor signal transdu... 33 6.5
UniRef50_A4M2K6 Cluster: Putative uncharacterized protein precur... 33 6.5
UniRef50_UPI000051A343 Cluster: PREDICTED: similar to scaf6 CG33... 33 8.6
UniRef50_Q4S5N3 Cluster: Chromosome 9 SCAF14729, whole genome sh... 33 8.6
UniRef50_Q7WNL7 Cluster: LysR-family transcriptional regulator; ... 33 8.6
UniRef50_Q73Q96 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q756S7 Cluster: AER177Wp; n=1; Eremothecium gossypii|Re... 33 8.6
UniRef50_Q5B5V6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q6PGP7 Cluster: Tetratricopeptide repeat protein 37; n=... 33 8.6
UniRef50_P25196 Cluster: Nodulation protein nolF; n=2; Sinorhizo... 33 8.6
UniRef50_Q5W0U4 Cluster: B box and SPRY domain-containing protei... 33 8.6
>UniRef50_Q63FZ8 Cluster: Group-specific protein; n=11; Bacillus
cereus group|Rep: Group-specific protein - Bacillus
cereus (strain ZK / E33L)
Length = 474
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 LLPLKRIDFKLGSNRSDIDSVGDSKPVKPKYRLGRWQIKLLNDMSV-PVKCNKALKMMEN 473
LLP +R ++KLG+ + ID + DSK V PK+ +K + S + + ++K++++
Sbjct: 324 LLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTTVKNIGKKSTEEIYMHPSIKLLKS 383
Query: 474 MG--WN 485
G WN
Sbjct: 384 EGNAWN 389
>UniRef50_Q1ASU9 Cluster: GAF sensor signal transduction histidine
kinase; n=2; Bacteria|Rep: GAF sensor signal
transduction histidine kinase - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 391
Score = 35.5 bits (78), Expect = 1.2
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 124 TNEDETSCAVLE--KIPRAGKRNAEAE--VSDSSSNSCEMDTRSRAEGSRARPVPPRQRR 291
TN +E +VL+ P G+ AEA +++S + R RA ARP+PPR
Sbjct: 243 TNLEEARRSVLDLRAAPLEGRSLAEALALLAESQERESGIPVRFRAVNG-ARPLPPRVET 301
Query: 292 SFYCL*NESISNSARTGRTLTVSV 363
Y + E+++N+AR + V
Sbjct: 302 GLYRICQEALNNAARHAEASRIEV 325
>UniRef50_UPI0000E49FF4 Cluster: PREDICTED: similar to KIAA0467
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to KIAA0467 protein -
Strongylocentrotus purpuratus
Length = 1717
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 491 SPGSEGNGITEPLVPQLRMASGTGLGHTPSTSRPEPATKSAF 616
+P +E + T PL R+A GT H+P++SRP TK F
Sbjct: 640 APSAECSPSTGPLGRARRLAEGTSPQHSPASSRPHTPTKHKF 681
>UniRef50_UPI00015B4AC1 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 1110
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 363 DSKPVKPKYRLGRWQIKLLNDMSVPVKCNKALKMMENMGWNGGALGARGMG 515
D P P + LG K DM + + NK +++ MGW G LGA G
Sbjct: 1004 DRSPTPPSF-LGSMYSKANQDMGLD-ESNKGHQLLRKMGWGGAGLGANEQG 1052
>UniRef50_Q03YT4 Cluster: Leucyl aminopeptidase; n=1; Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293|Rep: Leucyl
aminopeptidase - Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 409
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 309 KRIDFKLGSNRSDIDSVGDSKPVKPKYRLGRW 404
+ +DF +GSN DID V V P +R G W
Sbjct: 377 EHVDFMIGSNDMDIDGVTQDGEVVPVFRSGDW 408
>UniRef50_A5P3I0 Cluster: Inner-membrane translocator; n=3;
Alphaproteobacteria|Rep: Inner-membrane translocator -
Methylobacterium sp. 4-46
Length = 1512
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 422 RHVRPGKVQ*GFEDDGKYGMERWSPGSEGNGITEPLVPQLRMASGTGLGH 571
RH+R G ++ G E G G+ + PG + +P++ LR G G GH
Sbjct: 1091 RHLRGGGLRRGIERGGA-GLRQGLPGGHQDRARQPILLDLRRRDGAGHGH 1139
>UniRef50_Q8TF72 Cluster: Protein Shroom3; n=8; Eutheria|Rep: Protein
Shroom3 - Homo sapiens (Human)
Length = 1995
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 175 GKRNAEAEVSDSSSNSCEMDTRSRAEGSRARPVPPRQRR 291
G R+ EA S S E + + AEG ARPVPP RR
Sbjct: 966 GLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARR 1004
>UniRef50_UPI0000ECBAEF Cluster: UPI0000ECBAEF related cluster; n=1;
Gallus gallus|Rep: UPI0000ECBAEF UniRef100 entry -
Gallus gallus
Length = 157
Score = 33.1 bits (72), Expect = 6.5
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = -1
Query: 564 KPVPDAILS*GTNGSVIPFPSLPGLHRSIPYFPSSS-KPYCT--LPGRTCRL--VILFAT 400
+P+P A+ +GS +PFPSL LH IP S++ P LP RL +F+
Sbjct: 5 RPLPVAVAPLPVSGSPLPFPSLHRLHSVIPALSSAALLPLSATPLPVPAVRLPPSPVFSV 64
Query: 399 CPADISA 379
PA+++A
Sbjct: 65 PPAEVTA 71
>UniRef50_A7CRY4 Cluster: Integral membrane sensor signal
transduction histidine kinase; n=1; Opitutaceae
bacterium TAV2|Rep: Integral membrane sensor signal
transduction histidine kinase - Opitutaceae bacterium
TAV2
Length = 503
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 262 ARPVPPRQRRSFYCL*NESISNSARTGRTLTVSVTVNQSSRNIGW 396
A +P R + L E++SN+ + G+ V VT++ SSR GW
Sbjct: 390 AENLPLEVREHLFRLVQEAVSNALQHGKASFVQVTLSPSSRRPGW 434
>UniRef50_A4M2K6 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter bemidjiensis Bem|Rep: Putative
uncharacterized protein precursor - Geobacter
bemidjiensis Bem
Length = 895
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +3
Query: 249 RGEPGTSGTPQTASELLLPLKRIDFKLGSNRSDIDSVGDSKPVKPKYRLGRWQIKLLNDM 428
RGEPG + T T L P ++ + S + SV S P K+++ + +
Sbjct: 34 RGEPGKNATSFTNISSLTPQQQANLTFDQTNSTVTSVSISSPPVVKFKI----LDSNGNP 89
Query: 429 SVPVKCNKALKMMENMGWNGGALGARGMG*QSHW 530
+ + + ++N+G+ L G SHW
Sbjct: 90 VIGIGARNSTGQLQNLGFTLAKLVPGTNGSPSHW 123
>UniRef50_UPI000051A343 Cluster: PREDICTED: similar to scaf6
CG33522-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to scaf6 CG33522-PA, isoform A - Apis
mellifera
Length = 820
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 363 DSKPVKPKYRLGRWQIKLLNDMSVPVKCNKALKMMENMGWNGGALGARGMG 515
D P P + LG K ++S+ + NK ++++ MGW G LGA G
Sbjct: 714 DRSPTPPSF-LGSTYSKAPQEISLD-ESNKGHQLLKKMGWGGAGLGANEQG 762
>UniRef50_Q4S5N3 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1090
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 109 NLTVATNEDETSCAVLEKIPRAGKRNAEAEVSDSSSNSCEMDTRSRAEGSRARPVP 276
++T ++ + L++ R + N+++ S+SS + C + T + A+GS+ P P
Sbjct: 638 SITAQSSTESAQDTYLDQQDRGSEANSQSGRSNSSDSLCSIRTGALAQGSKPSPAP 693
>UniRef50_Q7WNL7 Cluster: LysR-family transcriptional regulator;
n=1; Bordetella bronchiseptica|Rep: LysR-family
transcriptional regulator - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 303
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 71 SGYWRLVSRITTTTSLLPPMKTKQVALF*RRYPGLENEMLKLRSQI 208
SGY R+++ + T LP +++ALF +RYPG+ ++ + SQI
Sbjct: 95 SGYVRIITTMAATCQYLP----RELALFLQRYPGIRVDLQEDVSQI 136
>UniRef50_Q73Q96 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 303
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 278 GGTGRARLPSALLLVSISQLLDDESETSASAFRFPALGIFSKTAQLVSSSLVATVR 111
GG+G + L +A+LL + L + T S F F A+ IFS LV + VR
Sbjct: 40 GGSGFSNLATAILLPPVMALFNARKRTGRSIFIFMAVAIFSLYMFLVYIIISVPVR 95
>UniRef50_Q756S7 Cluster: AER177Wp; n=1; Eremothecium gossypii|Rep:
AER177Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 791
Score = 32.7 bits (71), Expect = 8.6
Identities = 22/95 (23%), Positives = 40/95 (42%)
Frame = +2
Query: 47 PTTSV*RFSGYWRLVSRITTTTSLLPPMKTKQVALF*RRYPGLENEMLKLRSQIRHLTVA 226
PT+S F+ Y R+ +I T S P K + RY G+ ++ + ++ ++ +
Sbjct: 388 PTSSPGGFTSY-RMDDQIQTPYSAGYPSNNKPMP----RYYGVSSQQRYAYTMLQQMSFS 442
Query: 227 RWIPGVEPRGAGHVRYPPDSVGAFIAFKTNRFQTR 331
W+P + P GH + +A Q R
Sbjct: 443 TWVPRMSPTSHGHPSQQQSPLAPQVALHQQHLQQR 477
>UniRef50_Q5B5V6 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 552
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/83 (30%), Positives = 33/83 (39%)
Frame = -3
Query: 265 VPGSPRLYSWYPSRNC*MTNLRPQLQHFVFQPWVSSLKQRNLFRLHWWQQ*GCSRDPGHK 86
V S LY W P+ + N P +Q W+ L +R+ R RDP
Sbjct: 116 VSNSRTLYGWAPTSDDEDDNPYPPIQSNALSSWLGRLSERSTSRR------AARRDPQTN 169
Query: 85 SPIPAETSHRGRRSDPYYTTTVT 17
S P E SH+ PY +T T
Sbjct: 170 SSDPIENSHQ-----PYESTAET 187
>UniRef50_Q6PGP7 Cluster: Tetratricopeptide repeat protein 37; n=27;
Euteleostomi|Rep: Tetratricopeptide repeat protein 37 -
Homo sapiens (Human)
Length = 1564
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 387 YRLGRWQIKLLNDMSVPVKCNKALKMMENMGWNGGALGARGM 512
Y L Q+K+ + C++ALK+++N+G +G +L R +
Sbjct: 310 YHLAEAQVKMHRPKEAVLSCSQALKIVDNLGASGNSLYQRNL 351
>UniRef50_P25196 Cluster: Nodulation protein nolF; n=2;
Sinorhizobium|Rep: Nodulation protein nolF - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 367
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 52 DLCVTFQR-VLETCVQDHDYNLTVATNEDETSCAVLEKIPRAGKRNAEAEVSDSSSNSCE 228
DL V F+R LE+ V + + E + AVLE+ R G+R A +E + ++ +
Sbjct: 95 DLLVRFERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADV 154
Query: 229 MDTRSRAEGSRA 264
+D R++ +A
Sbjct: 155 LDLRAQLRSKQA 166
>UniRef50_Q5W0U4 Cluster: B box and SPRY domain-containing protein;
n=14; Mammalia|Rep: B box and SPRY domain-containing
protein - Homo sapiens (Human)
Length = 402
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 39 GSDRRPLCDVSAGIGDLCPGSRLQ 110
GS+RRP+C AG+G C G R++
Sbjct: 34 GSERRPVCAACAGLGGRCRGHRIR 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,468,250
Number of Sequences: 1657284
Number of extensions: 17887765
Number of successful extensions: 60992
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 57173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60939
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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