Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00166
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.73 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   2.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.9  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   6.8  
AY752900-1|AAV30074.1|   81|Anopheles gambiae peroxidase 6 protein.    23   9.0  
AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450 pr...    23   9.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 384 KYRLGRWQIKLLNDMSVPV 440
           KY  GRW ++L+ND + PV
Sbjct: 93  KYE-GRWSVELINDRNTPV 110


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.8 bits (44), Expect(2) = 2.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 307 KGNKSSDAVWGVPDVPGS 254
           KG++  D + G P +PG+
Sbjct: 147 KGDRGRDGLPGYPGIPGT 164



 Score = 21.4 bits (43), Expect(2) = 2.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 277 GVPDVPGSPRL 245
           GVP VPG+P L
Sbjct: 166 GVPGVPGAPGL 176


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 524 ALLSHSPRSQGSTVPSHIFHH 462
           AL SHSP   GS    H+ HH
Sbjct: 805 ALSSHSPVGAGSHHLHHLHHH 825


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 262 ARPVPPRQRRSFYCL*NESISNSART 339
           A P PP ++R F CL    I+++ R+
Sbjct: 498 APPTPPERQRCFRCLEMGHIASNCRS 523


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 533 PQLRMASGTGLGHTPSTSRPEPATKSAFR 619
           PQ  MAS    G T STS     T+S +R
Sbjct: 149 PQPSMASVVANGDTASTSHRVTLTQSQYR 177


>AY752900-1|AAV30074.1|   81|Anopheles gambiae peroxidase 6 protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 196 QLQHFVFQPWVSSLKQRN 143
           Q QH VF+ W+ +   RN
Sbjct: 27  QYQHIVFEEWLPAFLGRN 44


>AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 525 GSVIPFPSLPGLHRSIPYFPSSSK 454
           G+V+  P + GLH    Y+P+ SK
Sbjct: 41  GTVVFIP-IAGLHHDPQYYPNPSK 63


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 169  RAGKRNAEAEVSDSSSNSCEMDTRSRAEGSRAR 267
            RAG R      S S S S        A+GSR+R
Sbjct: 1086 RAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSR 1118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,284
Number of Sequences: 2352
Number of extensions: 18197
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)