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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00164
         (661 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)                 54   1e-07
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)             53   2e-07
SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)                  53   2e-07
SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)           53   2e-07
SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)                   48   7e-06
SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_7894| Best HMM Match : Pox_A14 (HMM E-Value=0.13)                   29   4.4  
SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  

>SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
          Length = 254

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   
Sbjct: 49  QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAQHSPDLNPPDFYLWGFLKDNV 107

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   +   P ++C+ ++
Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138


>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
          Length = 615

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   
Sbjct: 273 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 331

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   +   P ++C+ ++
Sbjct: 332 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 362


>SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 474

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   
Sbjct: 49  QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 107

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   +   P ++C+ ++
Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138


>SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 163

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   
Sbjct: 49  QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 107

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   +   P ++C+ ++
Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138


>SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
          Length = 153

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   
Sbjct: 49  QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWVPHSPDLNPPDFYLWGFLKDNV 107

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   +   P ++C+ ++
Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138


>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
          Length = 999

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -3

Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318
           +WF QQD A  H A  T +WL       + +     +W   SPDLNP D+ L   L+   
Sbjct: 658 QWF-QQDGATPHTANETIAWLRQRFEGRLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 716

Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225
           Y      +E LK ++   ++  P ++C+ ++
Sbjct: 717 YQGNPQTIEELKTAITAKIRAIPKEECIKVI 747


>SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)
          Length = 267

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = -3

Query: 470 QDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTAYSKRH 303
           QD A  H A  T +WL     + + +     +W   SPDLNP D+ L   L+   Y    
Sbjct: 1   QDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNVYQGNP 60

Query: 302 DNLESLKQSVRLAVKNFPWKKCVLLL 225
             +E LK ++   +   P ++C+ ++
Sbjct: 61  QTIEKLKTAITAKINAIPKEECIKVI 86


>SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 361

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 494 NNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAY 315
           N +   F QD AP H A+++Q W + N       ++  L+    NP++ +L S+++   Y
Sbjct: 162 NKRSMLFVQDGAPAHTAKASQDWCKKN-------QNGRLTHLTSNPIE-NLWSIIDEETY 213

Query: 314 -SKRHDNLESLKQSVRLAVKN 255
              +   + SLK   + A +N
Sbjct: 214 RDPQPRTMTSLKSRFKKAWRN 234


>SB_7894| Best HMM Match : Pox_A14 (HMM E-Value=0.13)
          Length = 833

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 490 LLNMVL*GASLPSQEWYLDTLVPMFDTFFTKVWLSHSFIANTPPNHH 630
           L N++   ASL S +  +DT   +FD      W + S + +TP NHH
Sbjct: 322 LANIIGYLASLESHQTLVDTTKVLFDN-----WSNKSALKHTPYNHH 363


>SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1421

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 276 RTIGSEKFPMEKVRASIDNWPQRLKDCI 193
           R+I  E F  EKV+  ID++ + LK C+
Sbjct: 434 RSINEEDFDKEKVQEEIDHFWEALKRCL 461


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,827,080
Number of Sequences: 59808
Number of extensions: 426371
Number of successful extensions: 1480
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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