BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00164 (661 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 54 1e-07 SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) 53 2e-07 SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07 SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07 SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 53 2e-07 SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) 53 2e-07 SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6) 48 7e-06 SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21 SB_7894| Best HMM Match : Pox_A14 (HMM E-Value=0.13) 29 4.4 SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 >SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9) Length = 254 Score = 53.6 bits (123), Expect = 1e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + + +W SPDLNP D+ L L+ Sbjct: 49 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAQHSPDLNPPDFYLWGFLKDNV 107 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ + P ++C+ ++ Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138 >SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) Length = 615 Score = 53.2 bits (122), Expect = 2e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + + +W SPDLNP D+ L L+ Sbjct: 273 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 331 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ + P ++C+ ++ Sbjct: 332 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 362 >SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 474 Score = 53.2 bits (122), Expect = 2e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + + +W SPDLNP D+ L L+ Sbjct: 49 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 107 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ + P ++C+ ++ Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138 >SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 163 Score = 53.2 bits (122), Expect = 2e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + + +W SPDLNP D+ L L+ Sbjct: 49 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 107 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ + P ++C+ ++ Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138 >SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9) Length = 153 Score = 52.8 bits (121), Expect = 2e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + + +W SPDLNP D+ L L+ Sbjct: 49 QWF-QQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWVPHSPDLNPPDFYLWGFLKDNV 107 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ + P ++C+ ++ Sbjct: 108 YQGNPQTIEKLKTAITAKINAIPKEECIKVI 138 >SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) Length = 999 Score = 52.8 bits (121), Expect = 2e-07 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -3 Query: 485 EWFFQQDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTA 318 +WF QQD A H A T +WL + + +W SPDLNP D+ L L+ Sbjct: 658 QWF-QQDGATPHTANETIAWLRQRFEGRLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNV 716 Query: 317 YSKRHDNLESLKQSVRLAVKNFPWKKCVLLL 225 Y +E LK ++ ++ P ++C+ ++ Sbjct: 717 YQGNPQTIEELKTAITAKIRAIPKEECIKVI 747 >SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6) Length = 267 Score = 48.0 bits (109), Expect = 7e-06 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Frame = -3 Query: 470 QDSAPGHKARSTQSWLETNVSDFIRAE----DWPLSSPDLNPLDYDL*SVLESTAYSKRH 303 QD A H A T +WL + + + +W SPDLNP D+ L L+ Y Sbjct: 1 QDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKDNVYQGNP 60 Query: 302 DNLESLKQSVRLAVKNFPWKKCVLLL 225 +E LK ++ + P ++C+ ++ Sbjct: 61 QTIEKLKTAITAKINAIPKEECIKVI 86 >SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 361 Score = 33.1 bits (72), Expect = 0.21 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 494 NNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAY 315 N + F QD AP H A+++Q W + N ++ L+ NP++ +L S+++ Y Sbjct: 162 NKRSMLFVQDGAPAHTAKASQDWCKKN-------QNGRLTHLTSNPIE-NLWSIIDEETY 213 Query: 314 -SKRHDNLESLKQSVRLAVKN 255 + + SLK + A +N Sbjct: 214 RDPQPRTMTSLKSRFKKAWRN 234 >SB_7894| Best HMM Match : Pox_A14 (HMM E-Value=0.13) Length = 833 Score = 28.7 bits (61), Expect = 4.4 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 490 LLNMVL*GASLPSQEWYLDTLVPMFDTFFTKVWLSHSFIANTPPNHH 630 L N++ ASL S + +DT +FD W + S + +TP NHH Sbjct: 322 LANIIGYLASLESHQTLVDTTKVLFDN-----WSNKSALKHTPYNHH 363 >SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1421 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 276 RTIGSEKFPMEKVRASIDNWPQRLKDCI 193 R+I E F EKV+ ID++ + LK C+ Sbjct: 434 RSINEEDFDKEKVQEEIDHFWEALKRCL 461 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,827,080 Number of Sequences: 59808 Number of extensions: 426371 Number of successful extensions: 1480 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1473 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1693527500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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