Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00164
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 97 1e-20
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 50 2e-06
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 44 1e-04
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 42 3e-04
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 42 3e-04
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF100307-5|AAC68933.2| 316|Caenorhabditis elegans Hypothetical ... 30 1.3
Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 28 5.1
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 28 5.1
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 8.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 8.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 8.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 8.9
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = -3
Query: 497 FNNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTA 318
F +W FQQD AP HK ++ Q+W E+N DFI WP SSPDLNP+DY + SVLE+ A
Sbjct: 300 FKKTKWTFQQDGAPAHKHKNVQAWCESNFPDFIAFNQWPPSSPDLNPMDYSVWSVLEAKA 359
Query: 317 YSKRHDNLESLKQSVRLA 264
SK H N++SLK S++ A
Sbjct: 360 CSKPHRNIDSLKDSLKKA 377
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -2
Query: 240 VRASIDNWPQRLKDCIAANGDHFE 169
+RA++D +P+R++ CI A+GD FE
Sbjct: 425 LRATVDAFPKRVRVCIEADGDIFE 448
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -3
Query: 509 YNTMFNNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVL 330
Y ++ +++ FQQD+A H + ST+ + + + + DWP SPDLNP++ +L +L
Sbjct: 217 YLRHYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGIL 272
Query: 329 ESTAY--SKRHDNLESLKQSVRLAVKNFP 249
Y +K + + SLKQ + A K+ P
Sbjct: 273 VRIVYAQNKTYPTVASLKQGILDAWKSIP 301
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -3
Query: 509 YNTMFNNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVL 330
Y ++ +++ FQQD+A H + ST+ + + + + DWP SPDLNP++ +L +L
Sbjct: 217 YLRHYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGIL 272
Query: 329 ESTAY--SKRHDNLESLKQSVRLAVKNFP 249
Y +K + + SLKQ + A K+ P
Sbjct: 273 VRIVYAQNKTYPTVASLKQGILDAWKSIP 301
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -3
Query: 509 YNTMFNNQEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVL 330
Y ++ +++ FQQD+A H + ST+ + + + + DWP SPDLNP++ +L +L
Sbjct: 347 YLRHYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGIL 402
Query: 329 ESTAY--SKRHDNLESLKQSVRLAVKNFP 249
Y +K + + SLKQ + A K+ P
Sbjct: 403 VRIVYAQNKTYPTVASLKQGILDAWKSIP 431
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAY--SKRH 303
F QD+A H + ST+ + + + + DWP SPDLNP++ +L +L Y +K +
Sbjct: 40 FCQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIVYAQNKTY 95
Query: 302 DNLESLKQSVRLAVKNFP 249
+ SLKQ + A K+ P
Sbjct: 96 PTVASLKQGILDAWKSIP 113
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEELERRLGGIRASN 229
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 230 ADAKFNQLENAWKAIP 245
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEKLERRLGGIRASN 299
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 300 ADAKFNQLENAWKAIP 315
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEELERRLGGIRASN 299
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 300 ADAKFNQLENAWKAIP 315
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 215 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGIRASN 270
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 271 ADAKFNQLENAWKAIP 286
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGIRASN 299
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 300 ADAKFNQLENAWKAIP 315
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGIRASN 229
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 230 ADAKFNQLENAWKAIP 245
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 476 FQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSKRHDN 297
FQQD+ P H + +SW + + DWP SPDLNP+++ L LE R N
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGIRASN 229
Query: 296 LESLKQSVRLAVKNFP 249
++ + A K P
Sbjct: 230 ADAKFNQLENAWKAIP 245
>AF100307-5|AAC68933.2| 316|Caenorhabditis elegans Hypothetical
protein T12B5.8 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 172 EVVSIGCNTVL*SLRPVINRSTHFFHGKFFTANRTDCF 285
EVV I C+ + ++ HFFH K FT NRTD F
Sbjct: 204 EVVKIDCSEIASTM------IVHFFHFKCFTINRTDEF 235
>Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical
protein T13F3.1 protein.
Length = 346
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 99 LFAIEFFFLCLSIYGKTRYIKMNCCSLVSV 10
+F I FF+ L+IYG T I+ C L V
Sbjct: 108 IFGIHFFYRYLAIYGHTEMIRKLVCILFLV 137
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 488 QEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSK 309
++ +F D+A H A+ T L+ + P SPDL P DY L L K
Sbjct: 235 EKLYFLHDNARPHVAKKTFQKLQDLGWTVL---PHPPYSPDLAPTDYHLFLSLSDYMRDK 291
Query: 308 RHDNLESLK 282
+ D+ E LK
Sbjct: 292 QFDDEEHLK 300
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 488 QEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSK 309
++ +F D+A H A+ T L+ + P SPDL P DY L L K
Sbjct: 210 EKLYFLHDNARPHVAKKTFQKLQDLGWTVL---PHPPYSPDLAPTDYHLFLSLSDYMRDK 266
Query: 308 RHDNLESLK 282
+ D+ E LK
Sbjct: 267 QFDDEEHLK 275
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 488 QEWFFQQDSAPGHKARSTQSWLETNVSDFIRAEDWPLSSPDLNPLDYDL*SVLESTAYSK 309
++ +F D+A H A+ T L+ + P SPDL P DY L L K
Sbjct: 235 EKLYFLHDNARPHVAKKTFQKLQDLGWTVL---PHPPYSPDLAPTDYHLFLSLSDYMRDK 291
Query: 308 RHDNLESLK 282
+ D+ E LK
Sbjct: 292 QFDDEEHLK 300
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 380 LSSPDLNPLDYDL*SVLESTAYSKRHDNLESLKQSVRLAVKNFPWK 243
L S LNP +L V E TA + + L V LA++N WK
Sbjct: 19 LRSFGLNPSQTELQLVSEQTAKKNGRVSFDDLLPRVVLAIQNEEWK 64
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3325 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3374
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3242 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3291
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3563 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3612
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3563 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3612
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3563 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3612
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 581 FVKKVSNIGTSVSRYHS*EGSEAPYNTMFNNQEWFFQQDSAP---GHKARST 435
F ++ NIG + E AP N + EWF +D P GH+ RST
Sbjct: 3258 FRTQLQNIGVLEGEFCRFETQVAPINDPYLKVEWF--KDKKPVLLGHRFRST 3307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,655,263
Number of Sequences: 27780
Number of extensions: 329278
Number of successful extensions: 853
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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