Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00163
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 165 1e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 154 2e-36
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 148 1e-34
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 131 2e-29
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 123 3e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 115 9e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 113 5e-24
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 101 2e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 98 2e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 91 2e-17
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 87 4e-16
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 83 4e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 6e-14
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 75 2e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 59 8e-08
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 58 3e-07
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 47 4e-04
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 44 0.004
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 42 0.010
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 42 0.018
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 42 0.018
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 41 0.031
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 40 0.055
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.072
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 38 0.17
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 37 0.39
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 37 0.39
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 36 0.89
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 34 2.7
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A1FR57 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 34 3.6
UniRef50_Q9VNG2 Cluster: CG1109-PA, isoform A; n=3; Endopterygot... 33 4.8
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 4.8
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 6.3
UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1 pre... 33 8.3
UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory tra... 33 8.3
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 165 bits (400), Expect = 1e-39
Identities = 101/221 (45%), Positives = 126/221 (57%), Gaps = 5/221 (2%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCA----- 368
FPMKQGVLTN+RVRLL+++ H R E + V + + S L L+
Sbjct: 61 FPMKQGVLTNTRVRLLLKKG-HSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 369 GCPGNSWID*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQTRAPAKEGKENAKPRHK 548
PG + + P R+ + + R + P K+GK KPR K
Sbjct: 120 DIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVR---QYVVKRPLPEKDGK---KPRTK 173
Query: 549 APKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 671
APKIQRL+TPVVLQ +EAEY K+L
Sbjct: 174 APKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKK 528
+G ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR L + KK
Sbjct: 116 KGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V++
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKK 116
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 154 bits (374), Expect = 2e-36
Identities = 98/216 (45%), Positives = 114/216 (52%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCAGCPGN 383
FPMKQGVLT+ RVRLL+ + H R E + V + + S L L+
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 384 SWID*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQTRAPAKEGKENAKPRHKAPKIQ 563
T P R + ++ RQ KE KPR KAPKIQ
Sbjct: 120 DIPGLTDTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQ 177
Query: 564 RLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 671
RLVTP VLQ AEYAKLL
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLL 213
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPR-KEKKMLNPD 543
+G ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L K+ + P
Sbjct: 116 KGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPK 175
Query: 544 IRHL 555
I+ L
Sbjct: 176 IQRL 179
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +2
Query: 254 AKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
+KGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV++
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 148 bits (358), Expect = 1e-34
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLL 251
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 42.7 bits (96), Expect = 0.008
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA-----KGHSCYRPRRDGERKRKSVRGCIVDAN 337
W+ Q RI D+ G P KQ + K HSC+ PR + RK K+VR V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 338 LSVLALVIVRRVP 376
+S L LV++++ P
Sbjct: 105 VSALTLVVLKKNP 117
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 409 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 537
P RLGP R+S I K++ L +EDD V+ LQ R +KK N
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 131 bits (316), Expect = 2e-29
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQG++TN RVRLL+ +
Sbjct: 61 FPMKQGIMTNGRVRLLLSK 79
Score = 83.4 bits (197), Expect = 4e-15
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKK 528
+G Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R L P KE K
Sbjct: 116 KGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPL-PEKEGK 168
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIP---DETGRPDKQPCSSSD------AKGHSCYRPRRDGERKRK 307
+ G C W+ RI D+ G P KQ ++ +KGHSCYRPRR GERKRK
Sbjct: 36 VSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRK 95
Query: 308 SVRGCIVDANLSVLALVIVRR 370
SVRGCIVD+ LSVL+LVIV++
Sbjct: 96 SVRGCIVDSQLSVLSLVIVKK 116
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/55 (49%), Positives = 29/55 (52%)
Frame = +3
Query: 507 PAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 671
P KEGK K + KAPKIQRLVTPVVLQ A+YAKLL
Sbjct: 163 PEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLL 214
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 123 bits (297), Expect = 3e-27
Identities = 53/78 (67%), Positives = 65/78 (83%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQ 257
FPMKQ VLT+ R+ LL++
Sbjct: 61 FPMKQDVLTHDRIHLLLR 78
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1
Query: 376 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKM 531
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + + R ++ R K+M
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRM 131
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 115 bits (277), Expect = 9e-25
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPM+QGVL RVR+LM++
Sbjct: 61 FPMRQGVLFKGRVRILMRK 79
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V++
Sbjct: 79 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKK 116
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLQPRKEKKMLN 537
+GA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R + KK
Sbjct: 116 KGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQK 175
Query: 538 -PDIRHL 555
P I+ L
Sbjct: 176 APKIQRL 182
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 113 bits (271), Expect = 5e-24
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 204 FPMKQGVLTNSRVRLLM 254
FPMKQGV+ RVRLL+
Sbjct: 61 FPMKQGVMVRGRVRLLL 77
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLQPRKEKKMLN 537
+G EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R + K K
Sbjct: 116 KGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTK 175
Query: 538 -PDIRHL 555
P I+ L
Sbjct: 176 CPKIQRL 182
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 254 AKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
++GHSC+ RR G RKRKSVRGCIV ++ VLAL IV++
Sbjct: 78 SEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKK 116
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 101 bits (241), Expect = 2e-20
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPM QGVLTN+RVRLL ++
Sbjct: 102 FPMMQGVLTNNRVRLLFKK 120
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLNPDI 546
+G EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R + + + + P I
Sbjct: 157 KGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKI 216
Query: 547 RHL 555
+ L
Sbjct: 217 QRL 219
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
KG CYRPR+ GE++RKSVRGCIV +LS L L +V++
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKK 157
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 206
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 207 PMKQGVLTNSRVRLLM 254
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +1
Query: 346 LGSCYCAQGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 501
L + +G EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 108 LNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +2
Query: 263 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
+ CY+P R+GER+RK+VRG IV ++SVL ++V++
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKK 115
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 91.1 bits (216), Expect = 2e-17
Identities = 37/78 (47%), Positives = 57/78 (73%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQ 257
FPMKQGV+T R+RLL++
Sbjct: 61 FPMKQGVITPRRIRLLLK 78
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 260 GHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
G SCYRPR+DGERKRK+VRGCI+ +S L V++++
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQK 116
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLQPRK 519
+G +EI GLT VPRR GPKRAS +R +F ++ + D + V+KR ++P K
Sbjct: 116 KGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKREVKPGK 167
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 87.0 bits (206), Expect = 4e-16
Identities = 35/81 (43%), Positives = 57/81 (70%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQRAT 266
FPMK+G+L+ SRV++L+++ +
Sbjct: 61 FPMKEGILSPSRVKILLKKGS 81
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 391 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVK 498
+T+ N + L KR+S +RK+ L+K DD+R++ +K
Sbjct: 125 ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK 160
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 284 RDGERKRKSVRGCIVDANLSVLALVIV 364
+ GER RKSVRGCIV +SVL + ++
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLL 116
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 200
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 201 GFPMKQGVLTNSRVRLLMQR 260
GFPM GVL +SRV LL++R
Sbjct: 61 GFPMVPGVLASSRVSLLVKR 80
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 370 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV-KRVLQPRKEKKMLNPDI 546
G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV +RV++ K+ ++ P I
Sbjct: 120 GDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRVVKSGKKDRLKAPKI 179
Query: 547 RHL 555
+ L
Sbjct: 180 QRL 182
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 206
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 207 PMKQGVLTNSRVRLLMQR 260
PM QGVL + R RLL+++
Sbjct: 68 PMYQGVLKSQRARLLLRQ 85
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 364
+G CY RR+GERKRKS+RGCIV +L L++V+V
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLV 120
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 370 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 462
G + +PGLTD VP+RL PKRASKIR+LF L
Sbjct: 123 GDKTLPGLTDVVVPKRLVPKRASKIRRLFGL 153
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/65 (38%), Positives = 45/65 (69%)
Frame = +3
Query: 66 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 245
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 246 LLMQR 260
L+ +
Sbjct: 60 PLLSK 64
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 254 AKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 367
+KG + YR RR G R+RKSVRG IV + VL L+I+R
Sbjct: 63 SKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILR 100
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRR 370
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V++
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKK 121
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 367 QGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDV 480
+GA EI GLTD NVPRRLGPKR +K+R+LF K D V
Sbjct: 121 KGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADRV 158
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/96 (28%), Positives = 55/96 (57%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 204 FPMKQGVLTNSRVRLLMQRATHVTDRAAMERENVNQ 311
F +K+ + T R+++ +++ + + +R+ +R+N+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGS-LGNRSHFKRKNLTK 94
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 43.6 bits (98), Expect = 0.004
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 170
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 171 LRVAGGNDKQGFPMKQGVLTNSRVRLLMQRATHVTDRAAMER 296
L++ GG DK GFPM+ V RV++L+ R R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 42.3 bits (95), Expect = 0.010
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 114 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQRAT 266
++G E LG KGY LR+ GG+DK GFPMK+ V R + L+ T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 41.5 bits (93), Expect = 0.018
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRRVP 376
K HSC+ PR + RK K+VR V+AN+S L LV++++ P
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNP 64
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 409 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 537
P RLGP R+S I K++ L +EDD V+ LQ R +KK N
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 41.5 bits (93), Expect = 0.018
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 170
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 171 LRVAGGNDKQGFPMKQGVLTNSRVRLLMQRATHVTDRAAMER 296
L + GG DK GFPM+ + RVR+L+ + + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.7 bits (91), Expect = 0.031
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 236
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 237 RVRLLM 254
+ R L+
Sbjct: 193 KKRALL 198
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 39.9 bits (89), Expect = 0.055
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 206
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 207 PMKQGVLTNSRVRLLMQRATHVTDRAAMERE-NVNQFVDVLLTPISRSWLLLLCAG 371
MKQ VL + RV LL+ + RE N D + PIS ++++ G
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPISLLNMVIIING 106
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.072
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 197
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 198 QGFPMKQGV 224
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 38.3 bits (85), Expect = 0.17
Identities = 26/96 (27%), Positives = 46/96 (47%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 197
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 198 QGFPMKQGVLTNSRVRLLMQRATHVTDRAAMERENV 305
G PM++ V + + +L++ ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
Score = 33.9 bits (74), Expect = 3.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 209 DETGRPDKQPCSSSDA-----KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVI 361
D+ GRP ++ SD +G + + P DGERKR +VRG V ++ L + I
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAI 112
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 37.1 bits (82), Expect = 0.39
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 254 HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 150
H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 37.1 bits (82), Expect = 0.39
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 117 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQRATHVTD 278
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+ R + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 35.9 bits (79), Expect = 0.89
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 209
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 210 MKQGVLTNSRVRLLM 254
M+ + +R RLL+
Sbjct: 63 MRPDLPGTARRRLLL 77
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 111 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQ 257
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L++
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLK 74
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 33.9 bits (74), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 161 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDAKGHS 268
G C RWR ++ + DE G + PC+ D +G S
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRGCS 52
>UniRef50_A1FR57 Cluster: Putative uncharacterized protein; n=1;
Stenotrophomonas maltophilia R551-3|Rep: Putative
uncharacterized protein - Stenotrophomonas maltophilia
R551-3
Length = 90
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 203 IPDETGRPDKQPCSSSDAKGHSCYRPRRDGERKRKSVRGC 322
+P + GRP K + SDA+ + YR RR G+ VR C
Sbjct: 14 LPRKRGRPPKFGYAMSDAQRAARYRARRAGQANHADVRAC 53
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSSDAKGHSC 271
+ G C +CR R+ + +P + GRP+ C SS GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS---GHTC 41
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 33.9 bits (74), Expect = 3.6
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 111 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQRATHVTDRAAM 290
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+ A V M
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLL--AEGVGFHPVM 87
Query: 291 ERENVNQFV 317
E E + +
Sbjct: 88 EGERKRKMI 96
>UniRef50_Q9VNG2 Cluster: CG1109-PA, isoform A; n=3;
Endopterygota|Rep: CG1109-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 807
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 287 DGERKRKSVRGCIVDANLSVLALVIVRRVPRKFLD*LMEMYPAV*VPNVLPKS 445
DG+R RKSV VD N S++ + R R + D L ++ VP++LP S
Sbjct: 71 DGKRLRKSVMRKTVDYNASIIKALENRLYQRDYRDRLALQPDSIYVPHMLPPS 123
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 4.8
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 27 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 204 FPMKQGVL 227
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 228 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 130
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1
precursor; n=1; Clostridium oremlandii OhILAs|Rep: Major
facilitator superfamily MFS_1 precursor - Clostridium
oremlandii OhILAs
Length = 421
Score = 32.7 bits (71), Expect = 8.3
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 260 PLHQKTNTAVCQDALFHRESLLVVAASDTKYIALPFIA*LISLYFGAHALFVKDTKLVLV 81
P ++ T T + + + + S LV A +KY+ PFIA LI A+ + D +++
Sbjct: 114 PAYRATVTDIISEENYAKASGLVQIAGTSKYLISPFIAGLILTVSDIRAILIFDIATIII 173
Query: 80 HHF 72
F
Sbjct: 174 TAF 176
>UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 515
Score = 32.7 bits (71), Expect = 8.3
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 117 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQRATHVTDRAAMER 296
+ A +EA + GD KG+ + A D +Q + ++V+ ++ H TDRA M
Sbjct: 364 LNASIEAAKAGDSGKGFAVVAAEVKDLA----EQSEESTAQVQKILTEIQHATDRAVMAT 419
Query: 297 ENVNQFVDVLLTPISRS 347
E + VD + +SR+
Sbjct: 420 EEGVKDVDQGVILMSRT 436
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,640,286
Number of Sequences: 1657284
Number of extensions: 13676361
Number of successful extensions: 41834
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 40295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41813
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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