Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00161
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA...    46   7e-04
UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila melanogaste...    39   0.099
UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA...    36   1.2  
UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep: CG1456...    35   2.1  

>UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14567-PA - Tribolium castaneum
          Length = 135

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
 Frame = +1

Query: 82  VFMILGAFVKAQRPFYAGLSPIGYPAV----------ETDLLSNRFGED---EEAPIEVR 222
           VF +  A   AQRP YAG  PIG P +           T  + NR GED      P++ R
Sbjct: 6   VFALFIAATVAQRPTYAGSRPIGRPDLASRFKDPEEQSTVAVYNRVGEDGTTARIPVDAR 65

Query: 223 GDGNLINRLNSYQSRTNP 276
           GDG L++RLN +     P
Sbjct: 66  GDGQLVDRLNQWPREHRP 83


>UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila
           melanogaster|Rep: CG33290-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 171

 Score = 39.1 bits (87), Expect = 0.099
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
 Frame = +3

Query: 246 IKFLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 353
           +K LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 130 LKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33290-PA - Apis mellifera
          Length = 138

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +3

Query: 246 IKFLPIENQPFWYLNWKAYEALR----KRPQTFQQRPN 347
           IK  P E QPFWY+NW+  +  R     R Q  Q  PN
Sbjct: 94  IKTWPREKQPFWYINWQQIQEHRGDSKNRAQLVQTEPN 131


>UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep:
           CG14567-PA - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 255 LPIENQPFWYLNWKAYEALR 314
           LP+E QPFW++N++A EA R
Sbjct: 152 LPVEQQPFWFINYQAIEAHR 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,549,081
Number of Sequences: 1657284
Number of extensions: 14026585
Number of successful extensions: 33728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33719
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)