Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00161
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.44 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.5  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 172 LLSNRFGEDEEA 207
           +LSNRFGE+EEA
Sbjct: 138 ILSNRFGENEEA 149


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 178 SNRFGEDEEAPIEVRGDGNLINRLNSYQSRTNPSGT 285
           +NRFG    A + +  +G+L+  +     +T P  T
Sbjct: 415 TNRFGTSGLAWLYLNNEGSLVYNVQIENLKTTPDNT 450


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 564 PVPFMSAMLSSMVQGCFQIYRL 499
           P+P + +++ + +  CF +Y L
Sbjct: 272 PLPIVLSIVKNCLSYCFNLYHL 293


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 564 PVPFMSAMLSSMVQGCFQIYRL 499
           P+P + +++ + +  CF +Y L
Sbjct: 272 PLPIVLSIVKNCLSYCFNLYHL 293


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 596 INVVPYCY 619
           I VVPYCY
Sbjct: 213 IQVVPYCY 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,933
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)