Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00161
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    39   0.006
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    35   0.12 
AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p pro...    30   3.4  
AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain b...    30   3.4  
AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA...    30   3.4  
AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB...    30   3.4  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
 Frame = +3

Query: 246 IKFLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 353
           +K LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 130 LKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 255 LPIENQPFWYLNWKAYEALR 314
           LP+E QPFW++N++A EA R
Sbjct: 152 LPVEQQPFWFINYQAIEAHR 171


>AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p protein.
          Length = 1728

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 552  MSAMLSSMVQGCFQIYRLRQSE*GLACHSEKKILKFEHQALLKNLLQPSHDFQCLCFFFA 373
            ++A LSS+ Q C   Y   +S  G     EK+ L F H+   ++ L+PSH    + F   
Sbjct: 1195 VTAQLSSIAQLCLDPYY--RSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPT 1252

Query: 372  FINF 361
            F+ F
Sbjct: 1253 FLQF 1256


>AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain
            binding factor protein.
          Length = 1750

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 552  MSAMLSSMVQGCFQIYRLRQSE*GLACHSEKKILKFEHQALLKNLLQPSHDFQCLCFFFA 373
            ++A LSS+ Q C   Y   +S  G     EK+ L F H+   ++ L+PSH    + F   
Sbjct: 1216 VTAQLSSIAQLCLDPYY--RSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPT 1273

Query: 372  FINF 361
            F+ F
Sbjct: 1274 FLQF 1277


>AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA,
            isoform A protein.
          Length = 1993

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 552  MSAMLSSMVQGCFQIYRLRQSE*GLACHSEKKILKFEHQALLKNLLQPSHDFQCLCFFFA 373
            ++A LSS+ Q C   Y   +S  G     EK+ L F H+   ++ L+PSH    + F   
Sbjct: 1460 VTAQLSSIAQLCLDPYY--RSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPT 1517

Query: 372  FINF 361
            F+ F
Sbjct: 1518 FLQF 1521


>AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB,
            isoform B protein.
          Length = 1973

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 552  MSAMLSSMVQGCFQIYRLRQSE*GLACHSEKKILKFEHQALLKNLLQPSHDFQCLCFFFA 373
            ++A LSS+ Q C   Y   +S  G     EK+ L F H+   ++ L+PSH    + F   
Sbjct: 1440 VTAQLSSIAQLCLDPYY--RSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPT 1497

Query: 372  FINF 361
            F+ F
Sbjct: 1498 FLQF 1501


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,206,627
Number of Sequences: 53049
Number of extensions: 634776
Number of successful extensions: 1854
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)