Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00161
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.1  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   2.1  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 142 PIGYPAVETDLLSNRFGEDEEAPIEVR 222
           P  Y +V T +  NRFG+D E+ + V+
Sbjct: 38  PDRYRSVATQVF-NRFGDDTESKLPVK 63


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 328 PSSKDQTILSIEINKGKKKTQ---ALKIMR 408
           P  K QT+ SIE N  K +TQ   +LK+ R
Sbjct: 75  PDRKFQTVTSIEGNTFKTETQVNDSLKVTR 104


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 328 PSSKDQTILSIEINKGKKKTQ---ALKIMR 408
           P  K QT+ SIE N  K +TQ   +LK+ R
Sbjct: 77  PDRKFQTVTSIEGNTFKTETQVNDSLKVTR 106


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 230 PSPRTSMGASSSSPNLFDSKSVSTAGYP 147
           P+PR +   SSS+ +   +K  + AG P
Sbjct: 513 PNPRIASAPSSSTSSSPPAKGAAAAGQP 540


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 217 PRWELPRLPRICS 179
           PRW+L +  R+C+
Sbjct: 185 PRWDLGKFHRVCT 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,526
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)