Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00160
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   4.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   5.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 566 EEIGAVVEIPLDADDPGYVESLEGIFINAIIKLSSFPLY 450
           EEI   +E  LD + P Y +  E  F++ +IK  S  LY
Sbjct: 322 EEILKEMEAVLDEEPPTYAKLQELKFMDRVIK-ESLRLY 359


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 566 EEIGAVVEIPLDADDPGYVESLEGIFINAIIKLSSFPLY 450
           EEI   +E  LD + P Y +  E  F++ +IK  S  LY
Sbjct: 322 EEILKEMEAVLDEEPPTYAKLQELKFMDRVIK-ESLRLY 359


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 282 LSGRKNKCATLRIYQGIMLTEYHRTYEMLTILHL 383
           LSG+  K  T +++QG+    +H T    +I+ +
Sbjct: 621 LSGKGLKKITGKMFQGVRSPTFHLTVRNTSIIKI 654


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 365 HLVRPMILGEHNPLINP 315
           H +RP IL +  P+ NP
Sbjct: 99  HQIRPPILHDTQPMCNP 115


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 113 VG*FVRRALLASDGFDEDGDWVAHW 39
           VG  V   ++AS     D  W+AHW
Sbjct: 236 VGTLVVNDVVASCYATIDSQWLAHW 260


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = -1

Query: 142 CGKKLSGLCLWVNSFVEPFSQATGSTRTVTGWHTGIF 32
           CG   SG C   +    PF    G+  T+     G F
Sbjct: 48  CGPGQSGQCFGPSICCGPFGCLVGTPETLRCQREGFF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,080
Number of Sequences: 336
Number of extensions: 2081
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)