Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00160
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   6.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 185 AESTTGSETRPTEKMRQETQ 126
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 218 LLTLALARAVFAESTTGSETRPTEKMRQETQ 126
           +L +    AVF  +     TRPT ++R+E +
Sbjct: 8   ILVVTFVVAVFGNTNLDPPTRPT-RLRREAE 37


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 218 LLTLALARAVFAESTTGSETRPTEKMRQETQ 126
           +L +    AVF  +     TRPT ++R+E +
Sbjct: 7   ILVVTFVVAVFGNTNLDPPTRPT-RLRREAK 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,446
Number of Sequences: 438
Number of extensions: 2589
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)