Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00160
         (568 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family...    28   5.0  
At2g37840.2 68415.m04646 protein kinase family protein contains ...    28   5.0  
At2g37840.1 68415.m04645 protein kinase family protein contains ...    28   5.0  

>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 932

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 327 LDKSLKWHTYFSYLIALRGYFSSPYI*TSSRGS 229
           LD + KW + ++ L+    +FSSP+I  + R S
Sbjct: 87  LDNNFKWWSMYACLLGFFYFFSSPFIKKTIRPS 119


>At2g37840.2 68415.m04646 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 596

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 292 LPDSLERLFQFALHLDKLTGLK 227
           +PD++E +F+ AL L KL G+K
Sbjct: 492 MPDAMETIFEAALDLGKLGGVK 513


>At2g37840.1 68415.m04645 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 733

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 292 LPDSLERLFQFALHLDKLTGLK 227
           +PD++E +F+ AL L KL G+K
Sbjct: 629 MPDAMETIFEAALDLGKLGGVK 650


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,892,850
Number of Sequences: 28952
Number of extensions: 190470
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)