Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00159
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.88 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.2  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 391 KEIPKEIGKLTQLDTFGARGNELKTIPEEMTSL---AKLRWLSLRI 519
           +  P E+ +L  +  FGA  ++    PE++T+L   AKLR + + I
Sbjct: 257 QSFPLELPQLPNMTKFGAYSSDKIYHPEDITNLLGYAKLRGVRIII 302


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 495 IEMVELENNQIETLPD-TMDRMTALVHCNLRNNRLEQFPSSILQ 623
           +E ++L NN++  +PD +   + +L   +L++N +E       Q
Sbjct: 44  LEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQ 87



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +1

Query: 256 SLPT---EI-GNLKNLVNLNLSYNPLNVL 330
           SLPT   E+ GN+ +L  LNL YN L+ +
Sbjct: 477 SLPTVALEVAGNISSLRYLNLDYNDLSAV 505



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 412 GKLTQLDTFGARGNELKTIPEEMTSLAKLRWLSL 513
           G ++ L       N+L  +P    SL +LR LSL
Sbjct: 487 GNISSLRYLNLDYNDLSAVPIVTHSLTELRHLSL 520


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 367 TLPASPDHRFPGSKHL 320
           T P  P+H   GSKHL
Sbjct: 70  TSPYPPNHPLSGSKHL 85


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 497 NLARLVISSGIVFSSFPRAPK 435
           NL RL+++ G  F+  P  PK
Sbjct: 5   NLLRLIVTIGEFFAMTPSRPK 25


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 90  LDFFLAIACSISANI*FSRM 31
           +D+F+ + CSI  NI F ++
Sbjct: 395 VDYFVFLLCSILVNIAFIKL 414


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 409 IGKLTQLDTFGARGNELKTIPEEMTSL 489
           +  LT +  F  R N+LKT+   + S+
Sbjct: 119 LAMLTSMVMFYKRSNDLKTLLSNLESI 145


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 102 FKLNLDFFLAIACSISANI*FSRMNFNMALILS 4
           + LN++ F ++ CSI +    + + F +A  +S
Sbjct: 341 YVLNMEHFFSVKCSIQSESLLNDILFPVAGFIS 373


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 409 IGKLTQLDTFGARGNELKTIPEEMTSL 489
           +  LT +  F  R N+LKT+   + S+
Sbjct: 75  LAMLTSMVMFYKRSNDLKTLLSNLESI 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,002
Number of Sequences: 336
Number of extensions: 3318
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)