Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00156
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   5.3  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   6.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.2  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = -3

Query: 508 KSTLLQVLSQEICEISEGGKVQQIVSLHPWYHQRQEVWVFQYQKLQPYLCYQCWQYIEEL 329
           KST+ + LS +  + +E  K      LH     + ++W     K  P   Y+  +Y +EL
Sbjct: 59  KSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRS-KYKDEL 117


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 536 PYGCSNCS 559
           PYGC +CS
Sbjct: 65  PYGCEHCS 72


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 572 NQRCRCSYYTHMGVIQKMNYAKV 504
           N+R    YY H  +I + N+ ++
Sbjct: 226 NRRGELFYYMHQQIIARYNFERL 248


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 367 YLCYQCWQYIEE 332
           Y+C QC+  +EE
Sbjct: 285 YICNQCYNTVEE 296


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 536 PYGCSNCS 559
           PYGC +CS
Sbjct: 218 PYGCEHCS 225


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 618 LHNPYTHQDSSLQEHQSKMSLQLLHPYGGHSKDELCESPLSS 493
           L NP  + +  + + Q  ++L L  PY G  +     SP SS
Sbjct: 191 LQNPGLNLNPPVTQTQLPLNLGLDFPYQGKFEVPTKSSPRSS 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,777
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)