Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00156
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    26   0.94 
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    24   5.0  
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    24   5.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.6  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 633 ELQPMLHNPYTHQDSSLQEHQSKMSLQLLHPYGGHS 526
           +L+P LH  + HQ S++      M L   HP G H+
Sbjct: 323 KLEPSLHLSHLHQMSAMSMGMGSMGLHHHHP-GHHA 357


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 516 IHLLNDPHMGVVTAATS--LIDALVKKNPDEYKGCVTLAVARLSRIVT 653
           IH L D  + VV  AT   L+D L+   PD+ K  V       S IVT
Sbjct: 77  IHCLFDK-IDVVDEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVT 123


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 516 IHLLNDPHMGVVTAATS--LIDALVKKNPDEYKGCVTLAVARLSRIVT 653
           IH L D  + VV  AT   L+D L+   PD+ K  V       S IVT
Sbjct: 77  IHCLFDK-IDVVDEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVT 123


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 567 KMSLQLLHPYGGHSKDELCESPLSSRYYLRRFAK*AKEAKCSR 439
           ++ +Q LH      K + C+S    RY  +  AK  +  KC R
Sbjct: 314 RIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYR 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,225
Number of Sequences: 2352
Number of extensions: 13195
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)