Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00155
(706 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 154 2e-36
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 149 7e-35
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 147 2e-34
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 141 1e-32
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 135 9e-31
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 128 2e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 126 5e-28
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 126 5e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 120 3e-26
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 116 7e-25
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 112 9e-24
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 109 5e-23
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 109 6e-23
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 109 9e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 109 9e-23
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 108 2e-22
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 104 2e-21
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 104 2e-21
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 103 6e-21
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 103 6e-21
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 101 1e-20
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 101 1e-20
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 101 2e-20
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 98 2e-19
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 98 2e-19
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 97 3e-19
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 97 5e-19
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 96 6e-19
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 96 9e-19
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 95 1e-18
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 95 1e-18
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 95 1e-18
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 94 3e-18
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 93 5e-18
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 93 5e-18
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 5e-18
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 93 8e-18
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 93 8e-18
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 92 1e-17
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 92 1e-17
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 92 1e-17
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 91 2e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 91 3e-17
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 91 3e-17
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 90 4e-17
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 90 4e-17
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 90 6e-17
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 90 6e-17
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 89 7e-17
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 89 7e-17
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 89 1e-16
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 89 1e-16
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 89 1e-16
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 89 1e-16
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 88 2e-16
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 88 2e-16
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 88 2e-16
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 88 2e-16
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 88 2e-16
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 87 3e-16
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 87 3e-16
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 87 4e-16
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 87 4e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 87 5e-16
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 87 5e-16
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 87 5e-16
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 87 5e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 87 5e-16
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 87 5e-16
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 86 7e-16
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 86 7e-16
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 86 7e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 86 9e-16
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 86 9e-16
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 86 9e-16
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 86 9e-16
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 86 9e-16
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 85 1e-15
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 85 1e-15
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 1e-15
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 85 1e-15
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 85 2e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 85 2e-15
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 85 2e-15
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 85 2e-15
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 85 2e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 85 2e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 85 2e-15
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 84 3e-15
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 84 3e-15
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 84 3e-15
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 84 3e-15
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 84 3e-15
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 84 4e-15
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 83 5e-15
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 83 5e-15
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 83 5e-15
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 83 5e-15
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 83 6e-15
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 83 6e-15
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 6e-15
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 83 6e-15
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 83 6e-15
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 83 6e-15
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 6e-15
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 83 6e-15
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 83 9e-15
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 83 9e-15
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 83 9e-15
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 83 9e-15
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 9e-15
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 83 9e-15
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 82 1e-14
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 82 1e-14
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 82 1e-14
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 82 1e-14
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 82 1e-14
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 82 1e-14
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 82 1e-14
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 82 1e-14
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 81 2e-14
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 81 2e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 81 2e-14
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 81 2e-14
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 81 2e-14
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 81 3e-14
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 81 3e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 81 3e-14
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 81 3e-14
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 81 3e-14
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 81 3e-14
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 81 3e-14
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 81 3e-14
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 81 3e-14
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 81 3e-14
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 80 5e-14
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 80 5e-14
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 80 5e-14
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 80 5e-14
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 80 5e-14
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 80 5e-14
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 80 5e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 80 6e-14
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 80 6e-14
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 80 6e-14
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 80 6e-14
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 80 6e-14
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 80 6e-14
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 80 6e-14
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 79 8e-14
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 79 8e-14
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 79 8e-14
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 79 8e-14
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 79 8e-14
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 79 8e-14
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 79 1e-13
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 79 1e-13
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 79 1e-13
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 79 1e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 79 1e-13
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 79 1e-13
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 79 1e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 79 1e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 79 1e-13
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 78 2e-13
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 2e-13
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 78 2e-13
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 78 2e-13
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 78 2e-13
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 78 2e-13
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 2e-13
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 78 2e-13
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 78 2e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 77 3e-13
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 77 3e-13
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 77 3e-13
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 77 3e-13
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 77 3e-13
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 3e-13
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 4e-13
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 77 4e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 77 4e-13
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 77 4e-13
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 77 4e-13
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 77 4e-13
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 77 4e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 77 4e-13
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 77 4e-13
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 77 4e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 77 4e-13
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 77 6e-13
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 77 6e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 77 6e-13
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 77 6e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 77 6e-13
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 77 6e-13
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 77 6e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 77 6e-13
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 77 6e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 76 7e-13
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 76 7e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 76 7e-13
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 76 7e-13
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 76 7e-13
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 76 7e-13
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 76 7e-13
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 76 7e-13
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 76 7e-13
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 76 7e-13
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 1e-12
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 1e-12
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 76 1e-12
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 76 1e-12
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 75 1e-12
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 75 1e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 75 1e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 75 1e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 75 1e-12
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 75 1e-12
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 75 1e-12
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 75 2e-12
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 75 2e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 75 2e-12
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 74 3e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 74 3e-12
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 74 4e-12
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 74 4e-12
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 74 4e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 74 4e-12
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 74 4e-12
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 74 4e-12
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 74 4e-12
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 74 4e-12
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 74 4e-12
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 74 4e-12
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 73 5e-12
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 5e-12
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 73 5e-12
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 73 5e-12
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 73 5e-12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 73 7e-12
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 73 7e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 73 7e-12
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 73 7e-12
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 7e-12
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 73 7e-12
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 73 7e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 73 7e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 9e-12
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 73 9e-12
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 73 9e-12
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 73 9e-12
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 9e-12
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 73 9e-12
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 73 9e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 72 1e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 72 1e-11
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 72 1e-11
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 72 1e-11
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 72 1e-11
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 72 1e-11
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 72 1e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 72 2e-11
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 72 2e-11
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 72 2e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 72 2e-11
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 72 2e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 72 2e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 2e-11
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 72 2e-11
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 72 2e-11
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 71 2e-11
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 2e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 71 2e-11
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 71 2e-11
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 71 2e-11
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 71 2e-11
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 71 3e-11
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 71 3e-11
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 71 3e-11
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 71 3e-11
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 71 4e-11
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 71 4e-11
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 71 4e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 71 4e-11
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 71 4e-11
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 71 4e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 70 5e-11
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 70 5e-11
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 5e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 70 5e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 5e-11
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 70 5e-11
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 70 5e-11
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 70 5e-11
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 70 5e-11
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 70 5e-11
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 5e-11
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 70 5e-11
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 70 6e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 70 6e-11
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 70 6e-11
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 70 6e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 70 6e-11
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 6e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 69 9e-11
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 69 9e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 69 9e-11
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 69 9e-11
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 69 9e-11
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 69 9e-11
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 69 9e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 69 1e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 69 1e-10
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 69 1e-10
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 69 1e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 69 1e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 69 1e-10
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 69 1e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 69 1e-10
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 69 1e-10
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 68 2e-10
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 68 2e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 68 2e-10
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 68 2e-10
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 68 2e-10
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 68 2e-10
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 68 2e-10
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 68 2e-10
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 2e-10
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 3e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 68 3e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 68 3e-10
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 3e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 68 3e-10
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 68 3e-10
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 68 3e-10
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 68 3e-10
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 67 3e-10
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 67 5e-10
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 67 5e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 5e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 67 5e-10
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 67 5e-10
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 5e-10
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 67 5e-10
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 67 5e-10
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 66 6e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 66 6e-10
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 66 6e-10
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 66 6e-10
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 66 6e-10
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 66 6e-10
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 66 6e-10
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 66 6e-10
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 66 6e-10
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 66 6e-10
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 66 8e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 66 8e-10
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 66 8e-10
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 66 8e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 66 8e-10
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 66 8e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 66 8e-10
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 66 1e-09
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 66 1e-09
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 66 1e-09
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 66 1e-09
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 1e-09
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 65 1e-09
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 65 1e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 1e-09
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 65 1e-09
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 1e-09
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 65 1e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 65 2e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 65 2e-09
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 65 2e-09
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 2e-09
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 65 2e-09
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 65 2e-09
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 65 2e-09
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 65 2e-09
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 65 2e-09
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 64 2e-09
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 64 2e-09
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 64 2e-09
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 64 2e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 64 2e-09
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 64 2e-09
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 64 2e-09
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 64 2e-09
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 64 2e-09
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 64 2e-09
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 3e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 64 3e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 64 3e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 64 3e-09
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 64 3e-09
UniRef50_Q61FS8 Cluster: Putative uncharacterized protein CBG115... 64 3e-09
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 64 3e-09
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 64 3e-09
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 64 3e-09
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 64 4e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 64 4e-09
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 4e-09
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 64 4e-09
UniRef50_UPI00006CC3DB Cluster: DEAD/DEAH box helicase family pr... 63 6e-09
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 63 6e-09
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 63 6e-09
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 63 6e-09
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 63 6e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 63 6e-09
UniRef50_Q9GZR7 Cluster: ATP-dependent RNA helicase DDX24; n=33;... 63 6e-09
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 63 6e-09
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 63 6e-09
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 63 7e-09
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 63 7e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 63 7e-09
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 63 7e-09
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 63 7e-09
UniRef50_Q6NQY9 Cluster: LD11580p; n=4; Endopterygota|Rep: LD115... 63 7e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 63 7e-09
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 63 7e-09
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 63 7e-09
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 63 7e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 63 7e-09
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 63 7e-09
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 63 7e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 62 1e-08
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 62 1e-08
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 154 bits (374), Expect = 2e-36
Identities = 77/119 (64%), Positives = 91/119 (76%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELAQQIQQVA +FG ++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLID
Sbjct: 234 LVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLID 293
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNL 612
FLE+GTT+L+RCTYLVLDEADRML + K + + ++ PK+ R L
Sbjct: 294 FLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQL 352
Score = 123 bits (297), Expect = 4e-27
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKI++QIRPDRQ LMWSATWPKEV++LAE++L +YIQ+NIGSL LSANHNILQ
Sbjct: 319 MGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQ 378
Query: 690 IVDIC 704
IVD+C
Sbjct: 379 IVDVC 383
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V P FEE FPDYV ++ G+ +PT IQAQGWPIAMSG++LVGV +
Sbjct: 149 GDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQ 202
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAY+LPA+VHINNQP + RGDGPI
Sbjct: 202 QTGSGKTLAYVLPAVVHINNQPRLERGDGPI 232
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 149 bits (361), Expect = 7e-35
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELAQQIQQVA +FG +SYVRNTCVFGGAPK Q RDL+RG EIVIATPGRLID
Sbjct: 358 LVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLID 417
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
FL G+TNL+RCTYLVLDEADRML + K +S+
Sbjct: 418 FLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQ 455
Score = 129 bits (311), Expect = 8e-29
Identities = 56/65 (86%), Positives = 63/65 (96%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKI+ QIRPDRQTLMWSATWPKEVK+LAED+LG+YIQINIGSL+LSANHNI Q
Sbjct: 443 MGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQ 502
Query: 690 IVDIC 704
+VD+C
Sbjct: 503 VVDVC 507
Score = 74.1 bits (174), Expect = 3e-12
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
+V NPIQ F E + PDYV + ++ GYK PT IQAQGWPIAMSG N VG+
Sbjct: 275 QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGI 324
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL YILPAIVHINNQ P++RGDGPI
Sbjct: 326 KTGSGKTLGYILPAIVHINNQQPLQRGDGPI 356
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 147 bits (357), Expect = 2e-34
Identities = 76/119 (63%), Positives = 84/119 (70%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELAQQIQQVA DFG NTCVFGGAPK Q RDLERG EIVIATPGRLID
Sbjct: 199 LVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLID 258
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNL 612
FLE+G TNL+RCTYLVLDEADRML + K + + ++ PK+ RNL
Sbjct: 259 FLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Score = 124 bits (298), Expect = 3e-27
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKI+ QIRPDRQ LMWSATWPKEV+ LAE++L DYIQINIGSL LSANHNILQ
Sbjct: 284 MGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQ 343
Query: 690 IVDIC 704
IVD+C
Sbjct: 344 IVDVC 348
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G + P FE+ PDY+ + G+ +PT IQAQG PIA+SG+++VG+ +
Sbjct: 114 GRNIPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQ 167
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAYI PA+VHI +Q +RRGDGPI
Sbjct: 167 QTGSGKTLAYIAPALVHITHQDQLRRGDGPI 197
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 141 bits (342), Expect = 1e-32
Identities = 92/238 (38%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKR 182
G V PI F E+ FP + G++EPT IQA GW IAMSG+++VG+ + K
Sbjct: 93 GKNVPAPIMQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKT 152
Query: 183 WPTSCQPLCT*ITNR---LFGEVMVRLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVW 353
P I+N+ L G+ + L L + ++ C F + + C++
Sbjct: 153 L-AYILPALIHISNQPRLLRGDGPIALV-LAPTRELAQQIQQVCNDFGRRMSIM-NTCIF 209
Query: 354 WCS*KRA-SPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQI 530
+ K + L G + FL G L + MGFEPQI
Sbjct: 210 GGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQI 269
Query: 531 RKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDIC 704
RKII QIRPDRQ LMWSATWPKE++KLAE++L +YIQINIGSL L+AN NI+QI++ C
Sbjct: 270 RKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECC 327
Score = 139 bits (336), Expect = 7e-32
Identities = 73/119 (61%), Positives = 82/119 (68%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELAQQIQQV DFG + NTC+FGGA K QA DL RGVEIVIATPGRLID
Sbjct: 178 LVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLID 237
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNL 612
FLE GTTNL+R TYLVLDEADRML + K +S+ ++ PK+ R L
Sbjct: 238 FLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKL 296
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAYILPA++HI+NQP + RGDGPI
Sbjct: 146 KTGSGKTLAYILPALIHISNQPRLLRGDGPI 176
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 135 bits (327), Expect = 9e-31
Identities = 72/104 (69%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
Frame = +1
Query: 202 HCAHK*PTAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTS--YVRNTCVFGGAPKREQ 375
H AH+ P E LVLAPTRELAQQIQ V DFG S +R TC+FGGA K Q
Sbjct: 290 HIAHQKPLQRGEG--PVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQ 347
Query: 376 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLDEADRML
Sbjct: 348 VRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRML 391
Score = 125 bits (301), Expect = 1e-27
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKIIEQIRPDRQ LMWSATWPKEV+ LAED+L DYIQINIGSL LSANHNI Q
Sbjct: 393 MGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQ 452
Query: 690 IVDIC 704
IVD+C
Sbjct: 453 IVDVC 457
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G V +P Q FEE NFPD+V + MG+ PT IQAQGWPIA+SG++LVG+ +
Sbjct: 221 GNSVPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQ 274
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKTLAY+LP IVHI +Q P++RG+GP+V
Sbjct: 274 QTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVV 305
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 128 bits (308), Expect = 2e-28
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELAQQI+QV DFG ++NTC+FGG KR+Q DL+ GVEIVIATPGRLID
Sbjct: 164 LILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLID 223
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL TNL+RC+YLVLDEADRML
Sbjct: 224 FLSSEHTNLRRCSYLVLDEADRML 247
Score = 118 bits (284), Expect = 1e-25
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIR IIEQIRPD QTLMWSATWP V +L +DYL DYIQIN+GSL+L+ANHNILQ
Sbjct: 249 MGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQ 308
Query: 690 IVDIC 704
I+D+C
Sbjct: 309 IIDVC 313
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V +P FEE FP + + + PTPIQ+QGWPIAMSG+++VG+
Sbjct: 79 GRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVGI 130
Score = 52.8 bits (121), Expect = 8e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL+Y+LPA++HI+ Q +RRGDGPI
Sbjct: 132 KTGSGKTLSYLLPALMHIDQQSRLRRGDGPI 162
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 126 bits (304), Expect = 5e-28
Identities = 62/84 (73%), Positives = 68/84 (80%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QIQQ + FG S R+TC++GGAPK Q RDL RGVEIVIATPGRLID
Sbjct: 328 LILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 387
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE G TNL+R TYLVLDEADRML
Sbjct: 388 MLEGGHTNLRRVTYLVLDEADRML 411
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKI+ QIRPDRQTL WSATWP+EV+ LA +L + ++ IGS L ANH+I Q
Sbjct: 413 MGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQ 472
Query: 690 IVDI 701
I+++
Sbjct: 473 IIEV 476
Score = 76.2 bits (179), Expect = 7e-13
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V P++YF+EANFPDY Q + G+ EPTPIQ+QGWP+A+ G++++G+ +
Sbjct: 243 GHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQ 296
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKTL+Y+LP +VH+ QP + +GDGPIV
Sbjct: 296 QTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIV 327
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 126 bits (304), Expect = 5e-28
Identities = 61/84 (72%), Positives = 67/84 (79%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQ+ FG +S +RNTCV+GG PK Q RDL RGVE+ IATPGRLID
Sbjct: 211 LVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLID 270
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE G TNL+R TYLVLDEADRML
Sbjct: 271 MLEAGKTNLRRVTYLVLDEADRML 294
Score = 112 bits (270), Expect = 7e-24
Identities = 49/64 (76%), Positives = 58/64 (90%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKII QIRPDRQTLMWSATWPKEV+ LA D+L D+IQ+NIGS++L+ANH I Q
Sbjct: 296 MGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQ 355
Query: 690 IVDI 701
IV++
Sbjct: 356 IVEV 359
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKR 182
G V P++ F+EA FP YV VK G+ PT IQ+QGWP+A+SG+++VG+ E K
Sbjct: 126 GSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT 185
Query: 183 WPTSCQP 203
T C P
Sbjct: 186 L-TYCLP 191
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKTL Y LP+IVHIN QP + GDGPIV
Sbjct: 180 TGSGKTLTYCLPSIVHINAQPLLAPGDGPIV 210
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 120 bits (289), Expect = 3e-26
Identities = 61/97 (62%), Positives = 72/97 (74%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQQ A FG +S ++NTC++GG PK Q RDL++GVEIVIATPGRLID
Sbjct: 173 LVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 232
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
LE TNL+R T +VLDEADRML + K +S
Sbjct: 233 MLESNHTNLRRVT-IVLDEADRMLDMGFEPQIRKCIS 268
Score = 71.7 bits (168), Expect = 2e-11
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V PI+ F + FPDYV Q ++ G+ EPTPIQAQGWP+A+ G++L+G+ E
Sbjct: 88 GRDVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAE 141
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKT+AY+LPAIVH+N QP + GDGPIV
Sbjct: 142 TGSGKTIAYLLPAIVHVNAQPILDHGDGPIV 172
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 614
MGFEPQIRK I PDRQTL WSATWPK V ++
Sbjct: 257 MGFEPQIRKCISDT-PDRQTLYWSATWPKNVNHVS 290
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 116 bits (278), Expect = 7e-25
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLVLAPTREL +QI++ A FG +RNT ++GG PKR Q + GVEI IA PGRLI
Sbjct: 64 CLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLI 123
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNL 612
D LE+G TNL R TYLVLDEADRML + K +S+ + PK+ + L
Sbjct: 124 DLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKL 183
Query: 613 LR 618
R
Sbjct: 184 AR 185
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQ-LSANHNI 683
MGFEPQIRK++ QIRPDRQTL+WSATWPKEV+KLA D + I IN+GS+ L A+HNI
Sbjct: 150 MGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNI 209
Query: 684 LQIVDI 701
Q V++
Sbjct: 210 KQYVNV 215
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKTL ++LPA++HI QP +R GDGPI
Sbjct: 34 TGSGKTLGFLLPAMIHIRAQPLLRYGDGPI 63
Score = 40.7 bits (91), Expect = 0.034
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 93 EPTPIQAQGWPIAMSGKNLVGVPE 164
EPT IQ QGWP+A+SG +++G+ E
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAE 33
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 112 bits (269), Expect = 9e-24
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA+QI++ A FG +S ++ + +GG PKR Q L RGVEI+IA PGRLID
Sbjct: 287 LVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLID 346
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FLE TNL+R TYLVLDEADRML
Sbjct: 347 FLESSVTNLRRVTYLVLDEADRML 370
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/65 (64%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFEPQIRKI+ QIRPDRQTLM+SATWPKEV L+ L + + +NIGSL L+ HNI
Sbjct: 372 MGFEPQIRKIVGQIRPDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIE 431
Query: 687 QIVDI 701
Q V I
Sbjct: 432 QNVFI 436
Score = 66.9 bits (156), Expect = 5e-10
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V P+ FE +FP Y+ ++ G+KEPTPIQ Q WPIA+SG++++G+ E
Sbjct: 202 GRDVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAE 255
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKTLA++LPAIVHIN Q +R GDGPIV
Sbjct: 256 TGSGKTLAFLLPAIVHINAQALLRPGDGPIV 286
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 109 bits (263), Expect = 5e-23
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + A FG +S + +TC++GGAPK Q RDL+RGV++V+ATPGRL D
Sbjct: 226 LVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLND 285
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE +L++ +YLVLDEADRML
Sbjct: 286 ILEMRRISLKQVSYLVLDEADRML 309
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/65 (58%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNIL 686
MGFEPQIRKI+++I P RQTLM++ATWPKEV+++AED L +Q+ IGS+ +L AN I
Sbjct: 311 MGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAIT 370
Query: 687 QIVDI 701
Q V++
Sbjct: 371 QNVEL 375
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +++V +
Sbjct: 142 GDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAI 193
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 109 bits (262), Expect = 6e-23
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI++ + FG +S ++ C++GGA K Q L++GV++VIATPGRLID
Sbjct: 178 LVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLID 237
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FLE TT L+R TYLVLDEADRML
Sbjct: 238 FLESETTTLRRVTYLVLDEADRML 261
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNIL 686
MGFE QIRKI+ QIRPDRQTLM+SATWPK V+ LA+DY + + + IG +L+ N I
Sbjct: 263 MGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIK 322
Query: 687 QIV 695
QIV
Sbjct: 323 QIV 325
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKTL+++LP+IVHIN QP +++GDGPIV
Sbjct: 147 TGSGKTLSFLLPSIVHINAQPTVKKGDGPIV 177
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+V +P + + +FP Y+ V +++P+PIQ+ +P+ +SG +L+G+ E
Sbjct: 95 KVPDPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAE 146
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 109 bits (261), Expect = 9e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQ+ FG + + CV+GGAPK Q ++L G +IVIATPGRLID
Sbjct: 290 LVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLID 349
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FLE +L+R TYLVLDEADRML
Sbjct: 350 FLESNVIDLKRVTYLVLDEADRML 373
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNIL 686
MGFEP IRKI+ QIRPDRQTLM+SATWP+ V++LA D+ GD I I IG ++ + N++I
Sbjct: 375 MGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDID 434
Query: 687 QIVDI 701
Q V+I
Sbjct: 435 QQVEI 439
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL+++LPA+VHIN Q P++ G+GPI
Sbjct: 258 QTGSGKTLSFMLPALVHINAQDPVKPGEGPI 288
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 116
EV P + E FP Y+ ++ + EP PIQAQ
Sbjct: 188 EVPQPFIKWNETKFPKYIMSVIEDSKFSEPMPIQAQ 223
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 109 bits (261), Expect = 9e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA+QI+Q F S +RNTC +GG PK Q L++GV I+IA PGRLID
Sbjct: 190 LVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLID 249
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+ TNL R TYLVLDEAD+ML
Sbjct: 250 LLEQNVTNLMRVTYLVLDEADKML 273
Score = 85.8 bits (203), Expect = 9e-16
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNIL 686
MGFE QIRKI++QIRPDRQTLMWSATWPKEV+ LA+D + IQ+N+GSL L+A +I
Sbjct: 275 MGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIK 334
Query: 687 Q 689
Q
Sbjct: 335 Q 335
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G V P+ + FPDYV + +K PTPIQ QGWPIA+SGK+++G E
Sbjct: 105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAE 158
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +2
Query: 140 KEFSWRTRTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
K+ + TGSGKTLA+ILPA VHI QP ++ GDGPIV
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIV 189
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 108 bits (259), Expect = 2e-22
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QIQ A FG +S + + C++GGAPK Q RDLERG +IV+ATPGRL D
Sbjct: 307 LVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLND 366
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE +L + +YLVLDEADRML
Sbjct: 367 ILEMRRVSLHQVSYLVLDEADRML 390
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/65 (61%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNIL 686
MGFEPQIRKI++Q++P RQTLM++ATWPKEV+K+A D L + +Q+NIG+ QL AN +I
Sbjct: 392 MGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSIT 451
Query: 687 QIVDI 701
Q VD+
Sbjct: 452 QYVDV 456
Score = 39.9 bits (89), Expect = 0.060
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 48 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
F + V+ G+ PTPIQAQ WPIA+ +++V V
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAV 274
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 104 bits (250), Expect = 2e-21
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGR 426
CLVLAPTRELAQQ +V D G S VR CV+GGAPK EQ ++ G +++ATPGR
Sbjct: 102 CLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGR 161
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
L DF+E+G L R T LVLDEADRML DL + E ++++ + DR
Sbjct: 162 LRDFMEEGVIKLDRVTMLVLDEADRML--DLGFEPEIRAIAGATRADR 207
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEP+IR I R DRQT+M+SATWP+ V+ LA +++ + I++ IG+ L A+ +I Q
Sbjct: 190 LGFEPEIRAIAGATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQ 249
Query: 690 IVDI 701
IV++
Sbjct: 250 IVEV 253
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
P+ F +A F + + T +K P+PIQAQ WPI MSG ++VG+
Sbjct: 27 PVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWPIIMSGHDMVGI 70
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRG 241
TGSGKTLA+ +PA+ I++QPP + G
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPG 98
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 104 bits (249), Expect = 2e-21
Identities = 81/230 (35%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS------------GKN 146
G PI F +A+FP YV + +KEPTPIQAQG+P+A+S GK
Sbjct: 78 GTGCPKPIIKFHQAHFPQYVMDVLMQQNFKEPTPIQAQGFPLALSGRDMVGIAQTGSGKT 137
Query: 147 LVGVPERV----PAKR-----------WP-TSCQPLCT*I--TNRLFGEVM-VRLFGLGA 269
L P P++R +P TS P C + L G +FG G
Sbjct: 138 LSVSPAAPFPYRPSRRRSSLHQSFGLLFPLTSVSPACYCAHQPSALLGAWRWTHMFGFGP 197
Query: 270 YQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKG 449
++ + SA R + H+ V C+ ++PG GE + H ++R + G
Sbjct: 198 HEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTSNPGSGERCGDLHRHARASHRLPGGR 257
Query: 450 HNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 599
+QL + MGFEPQIRKI++QIRPDRQTLMWSATWPKE
Sbjct: 258 EDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 307
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 103 bits (246), Expect = 6e-21
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QIQ A FG +S + C++GGAPK Q +++ERGV+IV+ATPGRL D
Sbjct: 237 LVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLND 296
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE +L + +YLVLDEADRML
Sbjct: 297 ILEMKRISLHQVSYLVLDEADRML 320
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/65 (53%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNIL 686
MGFEPQIRKI+ ++ RQTLM++ATWPKEV+K+A D L + Q+NIG++ +L AN +I
Sbjct: 322 MGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSIT 381
Query: 687 QIVDI 701
Q +++
Sbjct: 382 QTIEV 386
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM +++V +
Sbjct: 153 GGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAI 204
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 103 bits (246), Expect = 6e-21
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QIQ A FG +S + TC++GGAPK Q ++LERG +IV+ATPGRL D
Sbjct: 511 LILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLND 570
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE + Q+ + LVLDEADRML
Sbjct: 571 ILEMKMIDFQQVSLLVLDEADRML 594
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/65 (58%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNIL 686
MGFEPQIRKI+ +I P RQTLM++ATWPKEV+K+A D L + +Q+NIG + +L+AN I
Sbjct: 596 MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAIT 655
Query: 687 QIVDI 701
Q V++
Sbjct: 656 QYVEV 660
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + P FE + P + + + + G+ PTPIQAQ WPIA+ +++V +
Sbjct: 427 GENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAI 478
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 101 bits (243), Expect = 1e-20
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QIQ+ + F + + C++GGA KR Q L R +IV+ATPGRLID
Sbjct: 145 LILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLID 204
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
FL+ TNL TYLVLDEADRML D+ + + + + Y + DR
Sbjct: 205 FLDAQVTNLHNVTYLVLDEADRML--DMGFEQQVRKIDSYIREDR 247
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNIL 686
MGFE Q+RKI IR DRQT+ +SATWPK V+ LA D + I + IGS +++ N NI
Sbjct: 230 MGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTINKNIT 289
Query: 687 Q 689
Q
Sbjct: 290 Q 290
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 6 VEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
++V P +++ FP+ + + + Y PTPIQA +PI MSG +L+G+ +
Sbjct: 64 IQVPQPFIEWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQ 116
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKT+AY+LP +VHI +Q R+ GP++
Sbjct: 116 QTGSGKTIAYLLPGLVHIESQ---RKKGGPMM 144
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 101 bits (243), Expect = 1e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + A F + S VR V+GGA +Q RDLERG +++ATPGRL+D
Sbjct: 270 LVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVD 329
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+G L C YLVLDEADRML
Sbjct: 330 MMERGKIGLDFCKYLVLDEADRML 353
Score = 60.1 bits (139), Expect = 5e-08
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ--IRPD--RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIR+I+EQ + P R T+M+SAT+PKE++ LA D+L +YI + +G + S +
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSE 413
Query: 678 NILQIV 695
NI Q V
Sbjct: 414 NITQKV 419
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 101 bits (242), Expect = 2e-20
Identities = 50/93 (53%), Positives = 65/93 (69%)
Frame = +1
Query: 229 YSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 408
YS + + LVLAPTRELA QI + A F + S+VR V+GGAP Q R+++RG +++
Sbjct: 232 YSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLL 291
Query: 409 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
+ATPGRL D LE+G +L YLVLDEADRML
Sbjct: 292 VATPGRLNDLLERGKVSLANIKYLVLDEADRML 324
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIR I+E+ +RQTLM+SAT+P +++ LA D+L +YI +++G + S +
Sbjct: 326 MGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG-STSE 384
Query: 678 NILQ 689
NI Q
Sbjct: 385 NITQ 388
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G +V PI F + + + +K + +PTP+Q PI G++L+
Sbjct: 146 GKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLM 195
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTREL QI A F + ++ FGG P+ Q +D + G +I +ATPGRLID
Sbjct: 230 LILAPTRELVCQIADEAIKFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLID 289
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+++G T+L RCT+L+LDEADRML
Sbjct: 290 FIKRGVTSLSRCTFLILDEADRML 313
Score = 80.6 bits (190), Expect = 3e-14
Identities = 33/65 (50%), Positives = 50/65 (76%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE Q++ II QIRPDRQT+MW+ATWP+ +++ A ++ +QINIG+ L AN ++ Q
Sbjct: 315 MGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQ 374
Query: 690 IVDIC 704
I+++C
Sbjct: 375 IIEVC 379
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G E + FEE NFP + +K Y +PTPIQA GWPI + GK++VG+ E
Sbjct: 145 GCESIKALLTFEECNFPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDVVGIAE 198
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKT+++++PAI+HI + P + +GP V
Sbjct: 199 TGSGKTISFLIPAIIHILDTPLAQYREGPRV 229
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/93 (48%), Positives = 64/93 (68%)
Frame = +1
Query: 229 YSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 408
YS+ + CL+LAPTRELA QI + F + +R+ V+GGA Q R+++ G ++
Sbjct: 256 YSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLL 315
Query: 409 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
+ATPGRL+DF+EK +L+ C Y+VLDEADRML
Sbjct: 316 VATPGRLVDFIEKNKISLEFCKYIVLDEADRML 348
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQI---NIGSLQLS 668
MGFEPQIRKIIE+ +RQTLM+SAT+PKE++KLA D+L +YI + +GS S
Sbjct: 350 MGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDS 409
Query: 669 ANHNILQIVDI 701
I+ + D+
Sbjct: 410 IKQEIIYMTDV 420
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELAQQI +VA F +R TC+FGGA + QA DL +V+ATPGRLID
Sbjct: 202 LVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLID 261
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+E G + R +LVLDEAD+ML
Sbjct: 262 FIEGGQCPMNRVNFLVLDEADQML 285
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRKII I DRQT+M+SATWPKE+++LA D+L D + + IG+ L+ N NI Q
Sbjct: 287 MGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQ 346
Query: 690 IVDIC 704
++ C
Sbjct: 347 VITKC 351
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKT A+++PA+VHI Q P+ RGDGPIV
Sbjct: 170 KTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIV 201
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
+V +P FEE N PD + + + +++PTPIQ+ P+A+ G +L+G+
Sbjct: 119 DVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGI 168
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 97.5 bits (232), Expect = 3e-19
Identities = 55/105 (52%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA QI+ + + TCV+GG PK Q R L GV + IATPGRLI
Sbjct: 222 LVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLI 281
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
D LE TNL R TYL LDEADRML + K S+ +TDR
Sbjct: 282 DLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQ-IRTDR 325
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE QIRKI QIR DRQTLM+SATWP+E++ LA + D+++++IGS +L AN ++ Q
Sbjct: 308 MGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQ 367
Query: 690 IV 695
V
Sbjct: 368 HV 369
Score = 49.6 bits (113), Expect = 7e-05
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A+++PA +HI QPP++ GDGPI
Sbjct: 190 KTGSGKTMAFMIPAALHIMAQPPLQPGDGPI 220
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G V P+ F + PD + Q G+++PTPIQ+ WP+ ++ +++VGV
Sbjct: 137 GDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGV 188
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
C+ L PTRELA QI + F + ++ TCVFGGAP EQ R+L RG++IVIATPGRLI
Sbjct: 194 CVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLI 253
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L++ L +L+LDEADRML
Sbjct: 254 DILKQHCITLSEVRFLILDEADRML 278
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
Frame = +3
Query: 510 MGFEPQIRKIIE--QIRP--DRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 653
MGFEPQ++++I + P DRQT+++SAT+P V+ LA D++ Y +I++G
Sbjct: 280 MGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFMRPKYCRISVG 332
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 96.3 bits (229), Expect = 6e-19
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+ APTREL QQI A FG + VFGG K EQ++ L+ G EIV+ATPGRLID
Sbjct: 183 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLID 242
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
++ TNL R TYLV DEADRM +D+ + + +S++ + DR
Sbjct: 243 HVKAKATNLHRVTYLVFDEADRM--FDMGFEPQVRSIANNVRPDR 285
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+R I +RPDRQTL++SAT+ K+V+ L D L D +++ IG L AN ++ Q
Sbjct: 268 MGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EANEDVTQ 326
Query: 690 IVDI 701
IV I
Sbjct: 327 IVHI 330
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKT A++ PA+VHI +QP ++ GDGPIV
Sbjct: 151 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIV 182
Score = 40.3 bits (90), Expect = 0.045
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE----RVPAKRWP 188
P F F + + ++ + Y +PT IQ Q PIA+SG++++G+ + + A WP
Sbjct: 104 PCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 95.9 bits (228), Expect = 9e-19
Identities = 47/104 (45%), Positives = 66/104 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTREL QQI FG +R+ V+GG EQA+ L+ G EIV+ TPGRLID
Sbjct: 330 VIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLID 389
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
++K TNLQR +YLV DEADRM ++ +S++ + + DR
Sbjct: 390 HVKKKATNLQRVSYLVFDEADRMFDMGFEYQ-VRSIASHVRPDR 432
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE Q+R I +RPDRQTL++SAT+ K+++KLA D L D I++ G + AN ++ Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQ 473
Query: 690 IVDI 701
IV+I
Sbjct: 474 IVEI 477
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G P F F + + ++ Y +PTPIQ QG P+A+SG++++G+
Sbjct: 245 GAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGI 296
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT A+I P ++HI +Q + GDGPI
Sbjct: 298 KTGSGKTAAFIWPMLIHIMDQKELEPGDGPI 328
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/103 (45%), Positives = 63/103 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++APTRELAQQI++ FG ++ V GGA + +Q L GVE+VIATPGRL+D
Sbjct: 382 IIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLD 441
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTD 564
LE L +CTY++LDEADRML +K L T+
Sbjct: 442 VLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTN 484
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++GV E
Sbjct: 293 GGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAE 346
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/98 (51%), Positives = 63/98 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTREL QI++V +F +R+T V+GGA + Q R L G E+VIATPGRLID
Sbjct: 164 LVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLID 223
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
++G L R T+LVLDEADRML + K + K
Sbjct: 224 LHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPK 261
Score = 91.5 bits (217), Expect = 2e-17
Identities = 38/65 (58%), Positives = 51/65 (78%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+RKII + +RQTLMWSATWP+EV+ LAE Y+ +YIQ+ +G+ +L N I Q
Sbjct: 249 MGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQ 308
Query: 690 IVDIC 704
IV++C
Sbjct: 309 IVEVC 313
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G V +PIQ FEEA F V + G+ EPT IQ QGWP+A+SG+++VG+ +
Sbjct: 79 GTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQ 132
Score = 56.0 bits (129), Expect = 8e-07
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKTL++ILPA+VH +Q P+RRGDGPIV
Sbjct: 132 QTGSGKTLSFILPALVHAKDQQPLRRGDGPIV 163
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/84 (55%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++LAPTRELAQQI++ FG +R V GG + +Q L G EIVIATPGRLID
Sbjct: 472 IILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLID 531
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE L RCTY+VLDEADRM+
Sbjct: 532 VLENRYLVLSRCTYVVLDEADRMI 555
Score = 53.2 bits (122), Expect = 6e-06
Identities = 20/54 (37%), Positives = 37/54 (68%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++GV E
Sbjct: 383 GGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAE 436
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/105 (40%), Positives = 66/105 (62%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTREL Q+ F ++R+ V+GG PK Q +L++G +IV+ATPGRL+D
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
LE G +L RC Y+V+DEADR+L + +K +++ + +L
Sbjct: 465 LLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQL 509
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFE Q++KI+ Q+ ++Q L ++ATWP++V+KLA + D ++I IG +L+AN NI
Sbjct: 490 MGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGKSELTANKNIQ 549
Query: 687 QIVDI 701
Q V I
Sbjct: 550 QSVVI 554
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 12 VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
++N F E NF + V + +KEPT IQ WPIA+SGK+L+GV E
Sbjct: 273 LNNLASSFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIALSGKDLIGVAE 322
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDG 247
TGSGKTLA+ LPA++HI Q R G
Sbjct: 323 TGSGKTLAFALPALMHILKQREGERKSG 350
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 93.5 bits (222), Expect = 5e-18
Identities = 42/105 (40%), Positives = 65/105 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTREL Q+ F +++ V+GG PK Q +L++G +I++ATPGRL+D
Sbjct: 205 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 264
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
FLE G NL +C Y+V+DEADR+L + K +++ + +L
Sbjct: 265 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQL 309
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFE Q+RKI+ Q+ ++Q L +ATWP++V+KLA D+ D ++I IG +L+AN NI
Sbjct: 290 MGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGKNELTANKNIE 349
Query: 687 QIVDI 701
Q V I
Sbjct: 350 QNVII 354
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 12 VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+HN I F + F + + + + EPT IQ WPIA+SGK+L+GV E
Sbjct: 57 IHNIINKFSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAE 106
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 93.5 bits (222), Expect = 5e-18
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++L+PTRELA QI A F + + V+ +GG P +Q R+LERGV+I++ATPGRL D
Sbjct: 228 VILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLND 287
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+G +LQ +L LDEADRML
Sbjct: 288 LLERGRVSLQMVRFLALDEADRML 311
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +3
Query: 426 IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQI-RPD---RQTLMWSATWP 593
+N L +G L V + + MGFEPQIRKI++Q+ P RQT+++SAT+P
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 344
Query: 594 KEVKKLAEDYLGDYIQINIGSLQLSAN 674
+E+++LA D+L +YI + +G + S +
Sbjct: 345 REIQRLASDFLSNYIFLAVGRVGSSTD 371
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G V P+ F E + + + ++ Y +PTP+Q PI +G++L+
Sbjct: 138 GDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLM 187
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 93.5 bits (222), Expect = 5e-18
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA QI + F +R C +GGAP ++Q DL+RG EIV+ TPGR+ID
Sbjct: 495 IIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMID 554
Query: 436 FLEKG---TTNLQRCTYLVLDEADRM 504
L TNL RCTYLVLDEADRM
Sbjct: 555 VLSANAGRVTNLHRCTYLVLDEADRM 580
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/64 (42%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA L ++I +G + A+ + Q
Sbjct: 583 LGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVAS-EVEQ 641
Query: 690 IVDI 701
IV++
Sbjct: 642 IVEV 645
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A++LP HI +Q P++ G+GPI
Sbjct: 463 KTGSGKTIAFLLPMFRHIKDQRPLKTGEGPI 493
Score = 38.7 bits (86), Expect = 0.14
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G++ P+ + + + ++GY++PT IQAQ P SG++++GV
Sbjct: 410 GIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGV 461
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 92.7 bits (220), Expect = 8e-18
Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA QI A F C +FGGA K EQ + L G EIV+ATPGRLI
Sbjct: 180 LVLAPTRELATQIANEANAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATPGRLI 239
Query: 433 DFLE-KGTTNLQRCTYLVLDEADRMLVWDLNHKSEK 537
D L K + +L+R TYL LDEADRML D+ SE+
Sbjct: 240 DVLHVKNSIDLRRVTYLALDEADRML--DMGSASER 273
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKTLA++LPA I+ Q P+R+ +GP+
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKEGPM 178
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
E P++ F + D + + +K +GY+ PT IQAQ P+ G++ +G+
Sbjct: 96 ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGGRDALGL 146
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 92.7 bits (220), Expect = 8e-18
Identities = 51/84 (60%), Positives = 58/84 (69%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VLAPTRELAQQI++ V CV+GGAPK Q L RGV I++ATPGRLID
Sbjct: 179 VVLAPTRELAQQIEEETKKV-IPGDVYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLID 237
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL+ NL R TYLVLDEADRML
Sbjct: 238 FLDIKRINLHRVTYLVLDEADRML 261
Score = 83.0 bits (196), Expect = 6e-15
Identities = 34/60 (56%), Positives = 50/60 (83%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+RKI QIRPDRQT+M+SATWP+E+++LA ++ +I+I++GS +L AN ++ Q
Sbjct: 263 MGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQ 322
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKTL +++PA+ HI Q P+R GDGP+V
Sbjct: 147 KTGSGKTLGFMVPALAHIAVQEPLRSGDGPMV 178
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 51 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
P Y+ + + + PTP+QAQ WP+ +SG++LVGV
Sbjct: 110 PPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGV 145
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/84 (50%), Positives = 61/84 (72%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L+PTREL+ QI + A F + + ++ +GGAP +Q R+LERGV+I++ATPGRL+D
Sbjct: 200 LILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVD 259
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+ +L+ YL LDEADRML
Sbjct: 260 MIERARVSLRMIKYLALDEADRML 283
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI-RPD---RQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGFEPQIRKI+EQ+ P RQT+++SAT+P E++ L D+L Y +
Sbjct: 285 MGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL--DHLEFYAAV 331
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQP-LCT*ITNRL 230
+ Q ++ Y +PTPIQ PIAM+G++L+ + K C P +C + N+L
Sbjct: 131 LNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKT-AAFCFPIICGILRNQL 187
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 92.3 bits (219), Expect = 1e-17
Identities = 55/107 (51%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
LVLAPTRELA QI A F S R +FGG KR+Q + L G EIV+ATPGRL
Sbjct: 132 LVLAPTRELASQIANEAHKFTKFGVSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRL 191
Query: 430 IDFL-EKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
+D L K +TNL+R TYL LDEADRML K +S+ + + DR
Sbjct: 192 VDVLCMKNSTNLRRVTYLALDEADRMLDMGF-EKIVRSICQAVRPDR 237
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFE +R I + +RPDRQ +M+SAT P +++LA D L D + ++IG++ AN ++
Sbjct: 220 MGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVG-GANEDVR 278
Query: 687 QIV 695
Q+V
Sbjct: 279 QVV 281
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLA++LPA I+ Q P+ + +GPI
Sbjct: 100 KTGSGKTLAFLLPAYAQISRQRPLTKREGPI 130
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI+KI+ QIRPDRQTL WSATWPKEV++LA ++L D ++ IGS +L ANH I Q
Sbjct: 229 MGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQ 288
Query: 690 IVDI 701
V+I
Sbjct: 289 HVEI 292
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/98 (50%), Positives = 55/98 (56%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQQ A FG VEIVIATPGRLID
Sbjct: 170 LVLAPTRELAVQIQQEATKFG--------------------------VEIVIATPGRLID 203
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
+E TNL+R TYLVLDEADRML + +K +S+
Sbjct: 204 MIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQ 241
Score = 66.9 bits (156), Expect = 5e-10
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V P++ F + FP+YV Q + G+ EPTPIQ+QGWP+A+ G++L+G+ E
Sbjct: 85 GRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAE 138
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKTLAY+LPAIVH+N QP + GDGPIV
Sbjct: 139 TGSGKTLAYLLPAIVHVNAQPILAPGDGPIV 169
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTREL QI A F ++ VR V+GG QAR+LE+G +V+ TPGRL+D
Sbjct: 353 IIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLD 412
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+ KG NL + YL+LDEADRML
Sbjct: 413 FIGKGKINLSKVKYLILDEADRML 436
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 435 FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEV 602
F+GKG L+ V + MGFEP+IRK++ + RQTLM+SAT+ E+
Sbjct: 413 FIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEI 472
Query: 603 KKLAEDYLGDYIQINIGSLQLSANHNILQIV 695
++LA+++L +Y+ + +G + AN +I Q V
Sbjct: 473 QQLAKEFLSEYVFVTVGRVG-GANSDITQEV 502
Score = 41.5 bits (93), Expect = 0.020
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 18 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+G
Sbjct: 267 NGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMG 312
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 90.6 bits (215), Expect = 3e-17
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELAQQI++ F + ++N V GG +Q +L GVEI +ATPGR I
Sbjct: 195 LVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFI 254
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L++G T+L R +Y+VLDEADRML
Sbjct: 255 DHLQQGNTSLSRISYVVLDEADRML 279
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIR+I+ + QTL++SAT P E++ LA++YL + +Q+ +G + S N+ Q
Sbjct: 281 MGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVS-SPTTNVSQ 339
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKT A+ +P + H QPPIRRGDGP+
Sbjct: 164 TGSGKTAAFTIPMLQHCLVQPPIRRGDGPL 193
Score = 37.5 bits (83), Expect = 0.32
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
PI+ F + + + + Y P+ IQAQ PIA+SG++L+G E
Sbjct: 116 PIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAE 163
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L+PTREL QI + A + +R ++GGA K Q R+L+ G EI++ATPGRL++
Sbjct: 395 LILSPTRELCLQIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLE 454
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL GT L R +Y V+DEADRML
Sbjct: 455 FLSNGTIKLNRVSYFVMDEADRML 478
Score = 87.8 bits (208), Expect = 2e-16
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +3
Query: 435 FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 614
FL G +L V F + MGFEPQIRKI+ QIRPDRQTLM+SATWP E+K+LA
Sbjct: 455 FLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLA 514
Query: 615 EDYL-GDYIQINIGSLQLSANHNILQIVD 698
++ + I I +G L+L+AN NI Q V+
Sbjct: 515 SEFCKANSIYIQVGDLELTANPNIRQNVE 543
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
P+ F+EA F +Q +K + EPTPIQ GW ++G++++GV +
Sbjct: 317 PVTTFDEAVFNQQIQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGVSQ 364
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
++TGSGKTL ++LP ++H+ QPP+ G GPI+
Sbjct: 363 SQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIM 394
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+V+APTRELAQQI++ F H R T + GG EQ + +G EIVIATPGRLID
Sbjct: 393 VVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLID 452
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+ L +C Y+VLDEADRM+
Sbjct: 453 CLERRYAVLNQCNYVVLDEADRMI 476
Score = 40.7 bits (91), Expect = 0.034
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++G+ E
Sbjct: 305 GSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPI 232
TGSGKT A++LP + +I+ PP+
Sbjct: 359 TGSGKTAAFVLPMLAYISRLPPM 381
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTRELA QI + F +R C +GGAP REQ +L+RG EI++ TPGR+ID
Sbjct: 674 LIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMID 733
Query: 436 FL---EKGTTNLQRCTYLVLDEADRM 504
L + TNL+R TY+VLDEADRM
Sbjct: 734 LLAANQGRVTNLKRVTYVVLDEADRM 759
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+ KI +RPDRQT+++SAT P+ + L + L + I++ +G + A I Q
Sbjct: 762 MGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAK-EIEQ 820
Query: 690 IVDI 701
IV++
Sbjct: 821 IVEV 824
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A++LP HI +QPP++ DGPI
Sbjct: 642 KTGSGKTVAFLLPMFRHIKDQPPLKDTDGPI 672
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V P+Q + + V +GY++PTPIQ Q P MSG++++GV
Sbjct: 589 GKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGV 640
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/104 (43%), Positives = 66/104 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTREL QQ+ + + + + GG K EQ + L+ GVEI+IATPGRL++
Sbjct: 139 LILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLME 198
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
++K TNL+RCTY+V+DEAD+M K +S+ + + DR
Sbjct: 199 MIQKKATNLRRCTYVVIDEADKMFSMGF-EKQIRSIMQQIRPDR 241
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE QIR I++QIRPDRQTL+++AT K+++ L D L + + I IG + AN +I Q
Sbjct: 224 MGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGG-ENQANEDIRQ 282
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
GV PI F F + + + + +G+++PT IQ Q P +SG+++VGV
Sbjct: 54 GVRPPKPIVSFGHLGFDEELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGV 105
Score = 39.5 bits (88), Expect = 0.079
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT++Y+ P ++HI +Q + + +GPI
Sbjct: 107 KTGSGKTVSYLWPLLIHILDQRELEKNEGPI 137
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 89.8 bits (213), Expect = 6e-17
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG +++ATPGRL D
Sbjct: 354 LVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDD 413
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ +G L+ +LVLDEADRML
Sbjct: 414 IINRGKIGLENLRFLVLDEADRML 437
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ--IRP--DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIR IIE + P RQTLM+SAT+PK +++LA D+L +YI + +G + S +
Sbjct: 439 MGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVG-STSE 497
Query: 678 NILQIV 695
NI Q +
Sbjct: 498 NITQTI 503
Score = 37.1 bits (82), Expect = 0.42
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G +V I F++ + ++ +K Y +PTP+Q PI +SG++L+
Sbjct: 259 GQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLM 308
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 89.4 bits (212), Expect = 7e-17
Identities = 45/96 (46%), Positives = 62/96 (64%)
Frame = +1
Query: 220 PTAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 399
P ER + LVLAPTRELA QI++ A + ++ C++GG +R Q + GV
Sbjct: 172 PIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG-IKAVCLYGGGDRRAQINVVRNGV 230
Query: 400 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
EI+IATPGRL D +++G ++ TYL+LDEADRML
Sbjct: 231 EILIATPGRLNDLVQEGVVDVSTITYLILDEADRML 266
Score = 87.0 bits (206), Expect = 4e-16
Identities = 35/64 (54%), Positives = 51/64 (79%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRK++ +RPDRQT+M SATWP V++LA+ Y+ D IQ+ IG+L L+A H + Q
Sbjct: 268 MGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQ 327
Query: 690 IVDI 701
++++
Sbjct: 328 VIEV 331
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 12 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ NP+ F +A +PD +++ ++ + PTPIQAQ WPI + G++L+G+ +
Sbjct: 100 IPNPVSEFHQAFGEYPDLMEE-LRKQKFTTPTPIQAQAWPILLRGEDLIGIAQ 151
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 2/34 (5%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGD--GPIV 256
+TG+GKTLA++LPA++HI Q PI RG+ GP V
Sbjct: 151 QTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNV 183
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 89.4 bits (212), Expect = 7e-17
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+ PTREL QQ+ + + + + GG K Q ++L GV+I+IATPGRLI+
Sbjct: 265 LVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVDIIIATPGRLIE 324
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
++K TNLQRCTY+VLDEAD+M
Sbjct: 325 MVKKKATNLQRCTYIVLDEADQM 347
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFE QIR II QIRPD+Q L+++AT K++++L D L D I I IG + N +I Q
Sbjct: 350 LGFEYQIRSIIGQIRPDKQILLFTATMKKKIRQLCVDMLIDPIVITIGENENQVNEDIKQ 409
Query: 690 I 692
+
Sbjct: 410 L 410
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+AY+ P +VH++ Q + + +GPI
Sbjct: 233 KTGSGKTIAYVWPMLVHVSAQRAVEKKEGPI 263
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G V PI F + + +++PT IQ+Q P +SG+N++GV
Sbjct: 180 GNNVPKPIISFGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGV 231
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 89.0 bits (211), Expect = 1e-16
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA Q+ ++G +R V+GG P Q + L+RG +I++ATPGRL+D
Sbjct: 80 LVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLD 139
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
L + +L++ YLVLDEADRML +K + YA DR
Sbjct: 140 LLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQK-IMDYAADDR 182
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF I+KI++ DRQTL+++AT + V+ LAE YL + +I +
Sbjct: 165 LGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPTKIKV 211
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
F E +Q +K +GY++PTPIQ+Q P+ + G +L+
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLL 45
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG +++ATPGRL D
Sbjct: 382 LVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLED 441
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ +G L+ +LVLDEADRML
Sbjct: 442 MITRGKVGLENIRFLVLDEADRML 465
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIR+I+EQ+ RQTLM+SAT+PK++++LA D+L +YI + +G + S +
Sbjct: 467 MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSE 525
Query: 678 NILQIV 695
NI Q +
Sbjct: 526 NITQTI 531
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G V I F++ + ++ V Y +PTP+Q PI ++G++L+
Sbjct: 287 GQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLM 336
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +1
Query: 223 TAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 402
++Y E + +V+ PTRELA QI + A F + + ++ V+GG R Q+ ++ G
Sbjct: 374 SSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCN 433
Query: 403 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
I++ TPGRLIDF+ +G N C +LVLDEADRML
Sbjct: 434 ILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRML 468
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGF +++K++ ++ +R TLM+SAT+P EV++LA ++L +YI + +G++ +
Sbjct: 470 MGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGACMD 529
Query: 678 NILQIVDI 701
+ ++++I
Sbjct: 530 VLQEVIEI 537
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA Q +VAA F ++ C++GG + Q L EIV ATPGRLID
Sbjct: 162 LVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLID 221
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL+ G N R +LVLDEADRML
Sbjct: 222 FLQSGVFNPNRANFLVLDEADRML 245
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIR II + DR+T M+SATWPKE+++LA D+L + I +++G +L+ N I Q
Sbjct: 247 MGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQ 306
Query: 690 IV 695
V
Sbjct: 307 NV 308
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
+TGSGKT ++++PA++HI+ Q I DGPIV
Sbjct: 130 KTGSGKTASFLIPALMHISAQRKISENDGPIV 161
Score = 41.5 bits (93), Expect = 0.020
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
FEE N P + + +K + PTPIQ+ PI + G ++VG+
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGI 128
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 88.2 bits (209), Expect = 2e-16
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + FGH VR + GG +QA L + EIVIATPGRL+D
Sbjct: 75 LVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVD 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+G L LVLDEADRML
Sbjct: 135 HLEQGNARLDGIEALVLDEADRML 158
Score = 50.4 bits (115), Expect = 4e-05
Identities = 48/206 (23%), Positives = 86/206 (41%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQPLCT 212
F E + ++ G++ PTPIQAQ P A++GK+++G K PL
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKT-AAFLLPLI- 63
Query: 213 *ITNRLFGEVMVRLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGE 392
+RL G+ R L + ++ RF V + + + L +
Sbjct: 64 ---DRLAGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQ 120
Query: 393 GSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTL 572
+ L +G+ +L + + MGF+PQ+ +I+ ++ RQTL
Sbjct: 121 KREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTL 180
Query: 573 MWSATWPKEVKKLAEDYLGDYIQINI 650
++SAT EV A +L D +++ +
Sbjct: 181 LFSATMAGEVADFARAHLRDPVRVEV 206
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELAQQI+ + + Y ++ C++GG + EQ GVEIVIATPGRL D
Sbjct: 167 LVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTD 225
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
G +L TY+VLDEADRML
Sbjct: 226 LSNDGVISLASVTYVVLDEADRML 249
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE IR+I+ +IRPDR + SATWP+ V+KL + Y + + GSL L++ ++ Q
Sbjct: 251 MGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQ 310
Query: 690 IVD 698
+
Sbjct: 311 FFE 313
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 6 VEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV +
Sbjct: 76 VKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
Score = 36.3 bits (80), Expect = 0.73
Identities = 14/22 (63%), Positives = 21/22 (95%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQ 223
++TGSGKTLA++LPA++HI+ Q
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQ 149
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLI 432
+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+ TPGR+I
Sbjct: 342 VIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRII 401
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
D ++ G TN R T+LV DEADRM +D+ +++ KS+S + + DR
Sbjct: 402 DLVKMGATNFLRTTFLVFDEADRM--FDMGFEAQVKSISDHVRPDR 445
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE Q++ I + +RPDRQ LM+SAT+ ++V++LA D L D ++I G + AN +I Q
Sbjct: 428 MGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQ 486
Query: 690 IV 695
V
Sbjct: 487 KV 488
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT AY+ PAIVHI +QP ++ G+GP+
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPV 340
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE----RV 170
G++ P+ F +F + + ++ Y++PTPIQA P A+SG++++G+ + +
Sbjct: 257 GLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKT 316
Query: 171 PAKRWP 188
A WP
Sbjct: 317 AAYLWP 322
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLI 432
LVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+IATPGRLI
Sbjct: 226 LVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLI 285
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +E+G L C YLVLDEADRML
Sbjct: 286 DIIEQGFIGLAGCRYLVLDEADRML 310
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANH 677
MGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+D+L D YI + +G + S +
Sbjct: 312 MGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSE 370
Query: 678 NILQ 689
NI Q
Sbjct: 371 NIEQ 374
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 131 GDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTREL QQI + A F + +R+ CV+GG+ Q +++ +G +I++ATPGRL+
Sbjct: 216 LILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLY 275
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F EK +L YL+ DEADRML
Sbjct: 276 FTEKKIVSLSSVRYLIFDEADRML 299
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIE--QIRP--DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIR+I E ++ P RQTLM+SAT+PK++++LA D+L DY+ I +G S
Sbjct: 301 MGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAG-STVE 359
Query: 678 NILQIV 695
+I QI+
Sbjct: 360 SIQQII 365
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/96 (45%), Positives = 61/96 (63%)
Frame = +1
Query: 220 PTAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 399
P+ +R LVL PTRELA Q++ + + +R+ CV+GG + EQ +L++GV
Sbjct: 308 PSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKKGV 366
Query: 400 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
+I+IATPGRL D NL+ TYLVLDEAD+ML
Sbjct: 367 DIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKML 402
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI KI+ +RPDRQT+M SATWP V +LA+ YL + + + +G+L L A ++ Q
Sbjct: 404 MGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQ 463
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +3
Query: 12 VHNPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ NP F++A +P+ V + +K G+++PTPIQ+Q WPI + G +L+GV +
Sbjct: 236 IPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQ 287
Score = 33.5 bits (73), Expect = 5.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIR 235
+TG+GKTL Y++P +H+ QP ++
Sbjct: 287 QTGTGKTLCYLMPGFIHLVLQPSLK 311
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/96 (44%), Positives = 62/96 (64%)
Frame = +1
Query: 220 PTAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 399
P + ER LVL PTRELA Q++ + + + +++ CV+GG ++EQ + + +GV
Sbjct: 371 PISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQIQHITKGV 429
Query: 400 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
+I+IATPGRL D NL+ TYLVLDEAD+ML
Sbjct: 430 DIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKML 465
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFE QI KI+ +RPDRQT+M SATWP +++LA YL + + + +G+L L A H + Q
Sbjct: 467 LGFEGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQ 526
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +3
Query: 12 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ NP FE+A ++P+ V + +K G++ PTPIQ+Q WPI + G +L+GV +
Sbjct: 299 IPNPTCKFEDAFEHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQ 350
Score = 36.3 bits (80), Expect = 0.73
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIR-RGDGP 250
+TG+GKTL+Y++P +H+++QP R +GP
Sbjct: 350 QTGTGKTLSYLIPGFIHLDSQPISREERNGP 380
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELAQQ+ + + S V + V+GG EQ R L G I++ATPGRL+D
Sbjct: 87 LVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLD 146
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE 534
L K +L + T+LV DEADRML D+ K E
Sbjct: 147 LLRKRALSLSQLTHLVFDEADRML--DMGFKDE 177
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+++PTRELA QI F +R CV+GGA EQ +L+RG +IV+ TPGR+ID
Sbjct: 586 LIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMID 645
Query: 436 FL---EKGTTNLQRCTYLVLDEADRM 504
L + TNL+R T+LVLDEADRM
Sbjct: 646 ILCANNRRITNLRRVTFLVLDEADRM 671
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF PQI I++ IRPDRQT+M+SAT+P +V+ +A+ L ++I G + + +I Q
Sbjct: 674 MGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSI-VSSDIEQ 732
Query: 690 IVDI 701
V++
Sbjct: 733 FVEV 736
Score = 41.1 bits (92), Expect = 0.026
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + PIQ + +A + V +K Y++PT IQAQ P M+G++L+G+
Sbjct: 501 GKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGI 552
Score = 38.3 bits (85), Expect = 0.18
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
RTGSGKTLA++LP HI QP G+G I
Sbjct: 554 RTGSGKTLAFLLPMFRHILAQPKSAPGEGMI 584
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLVL PTRELA Q+++ + + + T V+GG +Q DL+RGV++V ATPGRL+
Sbjct: 204 CLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLL 263
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +E+GT L LVLDE DRML
Sbjct: 264 DHIEQGTMTLADVEILVLDEVDRML 288
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGF P +++I++Q RQTL +SAT P E+ +LA L D ++I IG
Sbjct: 290 MGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIG 337
Score = 39.9 bits (89), Expect = 0.060
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 6 VEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
VE+ F + D + V MGY EPTPIQAQ P ++G+++ G
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTG 175
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELA QI Q A + + ++GGAP+R Q L R +IV+ TPGR+ID
Sbjct: 216 LVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIID 275
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+E G +L+ ++LV+DEADR++
Sbjct: 276 FMESGDLSLKNISFLVVDEADRLM 299
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE QI I IRPDRQ L WSATWPK+V AE ++ I++ IGS QL+AN NI Q
Sbjct: 301 MGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQ 360
Score = 41.1 bits (92), Expect = 0.026
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
PI E F ++ + +++PTP+Q+ GWPIA+SG +++G+
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGI 182
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
++TGSGKTL++ILPAI HI QP GP V
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQPRQSYYPGPSV 215
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTRELA QI + F +R C +GGA ++Q DL+RG EI++ TPGR+I+
Sbjct: 631 LIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIE 690
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L + TNLQR TY+VLDEADRM
Sbjct: 691 LLAANSGRVTNLQRVTYVVLDEADRM 716
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+ K+ IRP+RQT+++SAT P+ + LA+ L ++I +G + A I Q
Sbjct: 719 MGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVA-PEITQ 777
Query: 690 IVDI 701
IV++
Sbjct: 778 IVEV 781
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A++LP HI +Q P++ DGPI
Sbjct: 599 KTGSGKTIAFLLPMFRHIRDQRPLKGSDGPI 629
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V P+Q + + + +GY+ PT IQ Q P MSG++++GV
Sbjct: 546 GKDVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGV 597
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLVL+PTRELA QI V + G +++ CV+GG+ K Q + GV+IVI TPGRL
Sbjct: 194 CLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLR 253
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +E L +++VLDEADRML
Sbjct: 254 DLIESNVLRLSDVSFVVLDEADRML 278
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/65 (43%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFE +R I+ RQ +M+SATWP +V KLA++++ + I++ IGS+ L+ANH+++
Sbjct: 280 MGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVM 339
Query: 687 QIVDI 701
QI+++
Sbjct: 340 QIIEV 344
Score = 41.1 bits (92), Expect = 0.026
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
++ F E+N P+ V KT +++P+PIQ+ WP + G++L+G+
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGI 157
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 86.6 bits (205), Expect = 5e-16
Identities = 44/102 (43%), Positives = 61/102 (59%)
Frame = +1
Query: 229 YSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 408
+SE+ +V+ PTREL QI A F + VR +GG Q RDL+RG I+
Sbjct: 385 FSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHIL 444
Query: 409 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE 534
IATPGRL+DF+ +G L +++LDEADRML D+ ++E
Sbjct: 445 IATPGRLMDFINRGLVGLDHVEFVILDEADRML--DMGFETE 484
Score = 55.2 bits (127), Expect = 1e-06
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 10/227 (4%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKR 182
GV I FE A P+ V VK Y+ PTP+Q PI + ++L+ + K
Sbjct: 305 GVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSGKT 364
Query: 183 WPTSCQPLCT*ITNRL----FGEVMV-RLFGLGAYQRVSTTNSASCCRFWTHILCS*HVC 347
L ITN L F E R +G + + +F + V
Sbjct: 365 AAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVA 424
Query: 348 VWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQ 527
S L G + F+ +G L V + MGFE +
Sbjct: 425 YGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETE 484
Query: 528 IRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 653
IRK+ + DR TLM+SAT+P E+++LA D+L D++ + +G
Sbjct: 485 IRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVG 531
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++LAPTRELA Q + A F ++ C +GG EQ DL+RG EIV+ TPGR+ID
Sbjct: 381 VILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMID 440
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L + TNL+R TYLVLDEADRM
Sbjct: 441 VLAANSGKVTNLRRVTYLVLDEADRM 466
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQI 692
GFEPQI K++ IRPD+QT+++SAT+P+ ++ LA L ++I +G + + +I Q
Sbjct: 470 GFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQN 528
Query: 693 VDIC 704
IC
Sbjct: 529 AVIC 532
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLA++LP HI +QP + GDGPI
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPI 379
Score = 36.7 bits (81), Expect = 0.55
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G++ PI+ + + + +K Y +PT IQAQ P MSG++++G+
Sbjct: 296 GIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGI 347
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 86.6 bits (205), Expect = 5e-16
Identities = 43/84 (51%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+ PTRELA QI + A F H+S + +GGA Q + + G I++ATPGRL+D
Sbjct: 342 LVICPTRELAIQIMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLD 401
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FLEKG YLVLDEADRML
Sbjct: 402 FLEKGKIVFSSLKYLVLDEADRML 425
Score = 40.3 bits (90), Expect = 0.045
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ--IRP--DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGF I+ +I + P +R TLM+SAT+P E+++LA +L +Y+ + +G++ +AN
Sbjct: 427 MGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYLFVVVGTVG-AANT 485
Query: 678 NILQIV 695
++ Q V
Sbjct: 486 DVKQEV 491
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 86.6 bits (205), Expect = 5e-16
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 438
+LAPTRELAQQI++ G VR+TC+ GG +QARDL R I+IATPGRL+D
Sbjct: 154 ILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDH 213
Query: 439 LE--KGTTNLQRCTYLVLDEADRML 507
LE KG +L++ +LV+DEADR+L
Sbjct: 214 LENTKG-FSLRKLKFLVMDEADRLL 237
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F E N + Q K + Y +PTPIQ++ P A+ G +++G+ +
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQ 126
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 86.6 bits (205), Expect = 5e-16
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI++ G + +R+ C+ GG EQARDL R ++IATPGRLID
Sbjct: 170 LVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLID 229
Query: 436 FLE--KGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
LE KG +L++ YLV+DE DRM+ D ++ L + R+
Sbjct: 230 HLEHTKG-FSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRI 275
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+Q F E + + + ++++ Y +PTPIQA P A+ GK++VG+ E
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAE 143
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 86.6 bits (205), Expect = 5e-16
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++ APTRELA QI A F +R + V+GG K EQ ++L+ G EIV+ATPGRLID
Sbjct: 305 VICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLID 364
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
L+ + R +YLVLDEADRM +DL + + +S+ + DR
Sbjct: 365 MLKMKALTMMRASYLVLDEADRM--FDLGFEPQVRSIVGQIRPDR 407
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/64 (51%), Positives = 50/64 (78%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEPQ+R I+ QIRPDRQTL++SAT P +V+KLA + L D I++ +G + + AN +I Q
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQ 448
Query: 690 IVDI 701
+V++
Sbjct: 449 VVNV 452
Score = 54.8 bits (126), Expect = 2e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +VH P++ FE+ F + +K Y++PT IQ Q PI +SG++++G+
Sbjct: 220 GFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGI 271
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT A++LP IVHI +QP ++R +GPI
Sbjct: 273 KTGSGKTAAFVLPMIVHIMDQPELQRDEGPI 303
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLI 432
LVLAPTRELAQQ + + FG +++ C+FGG K QAR+L ++ +V+ TPGR +
Sbjct: 258 LVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTL 317
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + G +L +YLVLDEADRML
Sbjct: 318 DLADSGELDLSSVSYLVLDEADRML 342
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +3
Query: 513 GFEPQIRKIIEQI---RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 683
GFE IR+II + RQT+M+SATWP+ V++LA +L + ++I +GS +LSAN I
Sbjct: 345 GFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRI 404
Query: 684 LQIVDI 701
QIV++
Sbjct: 405 EQIVEV 410
Score = 35.5 bits (78), Expect = 1.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 87 YKEPTPIQAQGWPIAMSGKNLVGVPE 164
+++PTPIQA WP +S K++VG+ E
Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGIAE 218
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVL PTRELA Q+++ A +G R C+ GGAP Q + L + V++V+ATPGRLI
Sbjct: 77 LVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLI 136
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D LE+G + R LVLDEADRML
Sbjct: 137 DHLERGKIDFSRLEVLVLDEADRML 161
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L+PTRELA QI + AD + + + VFGG R Q + L RGV+I++ATPGRL+D
Sbjct: 81 LILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLD 140
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+ +L+ +L+LDEADRML
Sbjct: 141 LMEQRAIDLRETRHLILDEADRML 164
Score = 37.1 bits (82), Expect = 0.42
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF + KI+ + DRQ++M+SAT PK ++ L++ L + ++++
Sbjct: 166 MGFVRDVMKIVGKCPDDRQSMMFSATMPKPIEDLSKKILTNPQKVSV 212
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/84 (53%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+AP+RELA QI + F R V GG QA +L RGVEIVI TPGRL D
Sbjct: 778 LVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQD 837
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LEK T L +C Y++LDEADRM+
Sbjct: 838 CLEKAYTVLNQCNYVILDEADRMM 861
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+G+ E
Sbjct: 690 GGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 743
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 85.8 bits (203), Expect = 9e-16
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QI Q +G R T +FGG + Q R L+RGV + IATPGRL+D
Sbjct: 73 LVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLD 132
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++G +L + VLDEADRML
Sbjct: 133 LMDQGYVDLSQAKTFVLDEADRML 156
Score = 39.5 bits (88), Expect = 0.079
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF P ++ I+ ++ RQT+ ++AT P +V +LA L + ++I +
Sbjct: 158 MGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNNPVRIEV 204
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
+Q+ + T Y PTPIQ Q P + G +L+G
Sbjct: 7 IQEALATEKYHTPTPIQGQAIPHLLEGSDLIG 38
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 85.8 bits (203), Expect = 9e-16
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA Q + + F + +R ++GG+ R Q DL+RG +I++ATPGRL D
Sbjct: 288 LVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRD 347
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++G NL+ +L+LDEADRML
Sbjct: 348 LIDRGKVNLKLIKFLILDEADRML 371
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIR-----PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF PQIR+I+E RQT+M+SAT+P+E+++LA+D+L +YI + +G + ++
Sbjct: 373 MGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSG 432
Query: 675 HNILQIV 695
+ ++V
Sbjct: 433 SIVQRVV 439
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 85.8 bits (203), Expect = 9e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELAQQI++V + +R C +GG K +Q+R L GV+IVI TPGRL D
Sbjct: 188 LVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLND 247
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L K +L YLVLDEADRML
Sbjct: 248 LLRK--HHLSSVQYLVLDEADRML 269
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF PQI +I+QI +RQTLM+SATWPKEVK LA +L D I+I +GS +L+ + N+ Q
Sbjct: 271 MGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQ 330
Query: 690 -IVDI 701
IV+I
Sbjct: 331 HIVNI 335
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 18 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
NP Q F + FP Q + G+ PT IQ Q WPI + G +LVG+
Sbjct: 109 NPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDLVGL 153
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 85.8 bits (203), Expect = 9e-16
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CL+LAPTREL QI F S + C++GG + Q L +G +I+IA PGRLI
Sbjct: 207 CLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLI 266
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L++G T L++ ++LVLDEADRML
Sbjct: 267 DLLDQGCTTLKQVSFLVLDEADRML 291
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/63 (60%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNIL 686
MGFEPQIRKI++QIRP RQT+++SATWPKEV+KLA D+ + + I IG+++L++N I
Sbjct: 293 MGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIK 352
Query: 687 QIV 695
QIV
Sbjct: 353 QIV 355
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 6 VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
V V +PI FE+ FP + + G+K PT IQAQGW IA++G +L+G+ +
Sbjct: 126 VTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQ 179
Score = 36.3 bits (80), Expect = 0.73
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHI 214
+TGSGKTLA++LPAIVHI
Sbjct: 179 QTGSGKTLAFLLPAIVHI 196
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 85.8 bits (203), Expect = 9e-16
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRL 429
CLVLAPTRELA+Q+++ +F ++ +T C++GG P +Q R L+ GV++ + TPGR+
Sbjct: 181 CLVLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRV 237
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
ID +++G NL ++VLDEAD+ML
Sbjct: 238 IDLMKRGALNLSEVQFVVLDEADQML 263
Score = 36.7 bits (81), Expect = 0.55
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF + I+E++ RQ++M+SAT P ++ L + YL + + +++
Sbjct: 265 VGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDL 311
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA QI + T V+ T ++GG +Q +DLE+GV+IV+ TPGR+ID
Sbjct: 92 IIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIID 151
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L + T +L YLVLDEADRML
Sbjct: 152 HLNRDTLDLSHVEYLVLDEADRML 175
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQIN 647
MGF + +II++ +++T ++SAT PKE+ +A ++ +YI ++
Sbjct: 177 MGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVS 222
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++APTREL QI + F + +R CV+GG EQ +L+RG EI++ TPGR+ID
Sbjct: 587 IIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 646
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L + TNL+R TY+VLDEADRM
Sbjct: 647 MLAANSGRVTNLRRVTYVVLDEADRM 672
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGFEPQ+ +II+ +RPDRQT+M+SAT+P++++ LA L I++ +G
Sbjct: 675 MGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVG 722
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLA+ILP HI +QP + GDG I
Sbjct: 555 KTGSGKTLAFILPMFRHILDQPSMEDGDGAI 585
Score = 39.5 bits (88), Expect = 0.079
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
PI+ + + + ++ +G+++PTPIQ Q P MSG++L+G+
Sbjct: 508 PIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGI 553
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CL+LAPTRELA QI A F + ++ ++GG + Q +L++G +I++ATPGRL
Sbjct: 454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D LEKG L T+LVLDEADRML
Sbjct: 514 DILEKGKIKLFLTTFLVLDEADRML 538
Score = 35.9 bits (79), Expect = 0.97
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
RQT+M+SAT+ KE++ LA++YL Y + +G + S N I Q
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQ 622
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA QI + F +R CV+GGAP EQ ++++ +IV+ATPGRLID
Sbjct: 553 IIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLID 612
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L + TNL R TYLVLDEADRM
Sbjct: 613 LLTANSGRVTNLYRVTYLVLDEADRM 638
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNIL 686
MGFEPQ+ KI+ IRPDRQT+++SAT+PK+++ LA L + ++I +G + A I
Sbjct: 641 MGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVA-AEIE 699
Query: 687 QIVDI 701
QIV++
Sbjct: 700 QIVEV 704
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + P+ + P +K +GY PTPIQ+Q P MSG++++GV
Sbjct: 468 GRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGV 519
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A++LP HI +Q P+ +GP+
Sbjct: 521 KTGSGKTMAFLLPMFRHIKDQRPVEPSEGPV 551
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/97 (48%), Positives = 57/97 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VLAPTRELAQQIQ F R V GG EQ+ + +G IV+ATPGRL+D
Sbjct: 329 VVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLD 388
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
LE+ L +CTY+V+DEADRML K LS
Sbjct: 389 CLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILS 425
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+G+ E
Sbjct: 241 GDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAE 294
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 659
RQT+M+SAT P V LA+ YL + + + IG++
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNI 482
Score = 33.5 bits (73), Expect = 5.2
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPI 232
TGSGKT A+I+P I+ I+ PP+
Sbjct: 295 TGSGKTAAFIIPLIIAISKLPPL 317
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 85.0 bits (201), Expect = 2e-15
Identities = 43/87 (49%), Positives = 55/87 (63%)
Frame = +1
Query: 247 SDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 426
++ LVLAPTRELA QI+ + ++ CV+GG + Q DLERG EI+I TPGR
Sbjct: 358 ANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERGAEIIICTPGR 416
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRML 507
L D + ++ TYLVLDEADRML
Sbjct: 417 LNDLIMANVIDVSTITYLVLDEADRML 443
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRK++ IRPDRQT+M SATWP V++LA+ Y+ + IQ+ +GSL L+A H++ Q
Sbjct: 445 MGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQ 504
Query: 690 IVDI 701
I+ +
Sbjct: 505 IIKL 508
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +3
Query: 12 VHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ NP+ FE+ A +PD +++ K MG+ +P+PIQ+Q WPI + G +++G+ +
Sbjct: 277 IPNPVWTFEQCFAEYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMIGIAQ 328
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTREL QI ++ F ++ ++GGA EQ L+RG EIVI TPGRLID
Sbjct: 445 LVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLID 504
Query: 436 F--LEKG-TTNLQRCTYLVLDEADRM 504
L KG TNL+R T+LVLDEADRM
Sbjct: 505 VLTLSKGKVTNLRRVTFLVLDEADRM 530
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF PQI I+ IRPDRQT ++SAT+P ++ LA+ L +QI +G SA+
Sbjct: 533 MGFAPQISAIVGNIRPDRQTALFSATFPIMIENLAKKILAKPLQIVVGQRGKSAS 587
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKTLA++LPAI H +QP +R DG IV
Sbjct: 414 TGSGKTLAFLLPAIRHALDQPSLRENDGMIV 444
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G + PI F + PD + + ++ Y+ P PIQ Q P M G++++G+ E
Sbjct: 360 GKKCPRPISSFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAE 413
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QI A F + S VR V+GG R Q +D+ +G +++ATPGRL D
Sbjct: 295 LILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSD 354
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+ L YLVLDEADRML
Sbjct: 355 MLERCKIGLDCIRYLVLDEADRML 378
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGFEPQIRKI+EQ RQTLM+SAT+P+E++ LA D+L DY+ + +G + S +
Sbjct: 380 MGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVG-STSQ 438
Query: 678 NILQ 689
NI Q
Sbjct: 439 NITQ 442
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELA QI + F + VR ++GG Q L+RG EI++ATPGRLID
Sbjct: 73 LIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLID 132
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++G+ ++ R T+LVLDEAD ML
Sbjct: 133 HIKRGSISIDRVTHLVLDEADTML 156
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
FEE V ++ MG+++ PIQ P+ ++G+++VG
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVG 44
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/101 (44%), Positives = 57/101 (56%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VL PTRELA Q+ A F S +R ++GG Q L+RGV IV+ TPGR+ID
Sbjct: 75 IVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVID 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQ 558
LE+G L + + VLDEAD ML EK LS+ Q
Sbjct: 135 LLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQ 175
Score = 39.5 bits (88), Expect = 0.079
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
+ MGF + KI+ Q DRQT ++SAT P ++ L +L + + + + + N
Sbjct: 158 LSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPN 214
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTREL QI F VR T +FGG + Q + LE GV+I++A PGRL+D
Sbjct: 84 LVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLD 143
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+G +L + LVLDEAD+ML
Sbjct: 144 LIEQGLCDLSQLETLVLDEADQML 167
Score = 37.9 bits (84), Expect = 0.24
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF I +I+ + DR T+++SAT PK + L E L + ++ I
Sbjct: 169 MGFAKPIERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEI 215
Score = 35.9 bits (79), Expect = 0.97
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 27 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
Q F + + + + GY +PTPIQAQ P+ + G++L+G+ +
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQ 52
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/98 (40%), Positives = 62/98 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTRELA QI + +G + + +T +FGG + Q L++G++I+IATPGRL+D
Sbjct: 159 LIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLD 218
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
+ +G +L+ + VLDEADRML H K L++
Sbjct: 219 LMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAE 256
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +3
Query: 438 LGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
+ +GH L + F + MGF IRKI+ ++ +Q+L +SAT P E+ +LA
Sbjct: 220 MNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFFSATMPPEITRLAA 279
Query: 618 DYLGDYIQINI 650
L + +++++
Sbjct: 280 SILHNPVEVSV 290
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 15 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
H F + + Q ++ GY+ PTPIQA+ P+ + G +L+G
Sbjct: 78 HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLG 124
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++L+PTRELA QI + FG + T GGAP R+Q RDL +GV+I++ATPGRL D
Sbjct: 180 IILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLED 239
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ L +LVLDEAD+ML
Sbjct: 240 LVDQKGLRLDETKFLVLDEADQML 263
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF P +++II ++ DRQTL++SAT KE+KKL E YL D +Q+++
Sbjct: 265 IGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV 311
Score = 33.5 bits (73), Expect = 5.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 81 MGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+GY PTPIQ+Q P ++ K+LVG+ +
Sbjct: 121 LGYTLPTPIQSQAIPAVLNSKDLVGLAQ 148
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 84.2 bits (199), Expect = 3e-15
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+ + + +R+ VFGG Q +L RGVEI+IATPGRL+D
Sbjct: 91 LILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLD 150
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ T NL + LVLDEADRML
Sbjct: 151 HVQQKTANLGQVQILVLDEADRML 174
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF P +++I+ + +RQTL++SAT+ E+KKLA YL + I + +A+ + Q
Sbjct: 176 MGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAAS-TVTQ 234
Query: 690 IV 695
IV
Sbjct: 235 IV 236
Score = 36.7 bits (81), Expect = 0.55
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F++ + + + GY PTPIQA+ P+ +SG++++G +
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQ 56
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+ + +G + + + GG P EQ LE+GV+++IATPGRL+D
Sbjct: 76 LILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLD 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
E+G L C LV+DEADRML
Sbjct: 136 LFERGKILLSSCEMLVIDEADRML 159
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF P I I ++ RQTL++SAT P +KKLA+ +L + QI I
Sbjct: 161 MGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQIEI 207
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F + + Q V +GY+EPTP+QA P + ++L+ V +
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQ 46
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/97 (41%), Positives = 61/97 (62%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI + +G +R +FGG + Q R LE+G++I++ATPGRL+D
Sbjct: 79 LVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLD 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+ +G +L + VLDE D+ML + H ++ ++
Sbjct: 139 LINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIIT 175
Score = 41.9 bits (94), Expect = 0.015
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQPLCT*ITNR--LF 233
+Q+ + GY E TPIQA+ P + G +L+G + K + L + + L
Sbjct: 12 IQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLK 71
Query: 234 GEVMVRLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHC 413
G+ +R L + ++T + S + ++ V + L +G
Sbjct: 72 GKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVA 131
Query: 414 YSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWP 593
+ + +G L+ V F + MG +++II + +RQ +++SAT P
Sbjct: 132 TPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNMLFSATMP 191
Query: 594 KEVKKLAEDYLGDYIQI 644
E++KLA+ L ++I
Sbjct: 192 VEIEKLADTILKGPVKI 208
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/104 (44%), Positives = 60/104 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+ + F + ++GGAP +Q R L++GV++V+ATPGR I
Sbjct: 75 LILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIH 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
F+E G L YLVLDEAD ML EK L K + DR
Sbjct: 135 FIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVL-KASPDDR 177
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 656
+ MGF + K+++ DR LM+SAT P +KK+AE Y+ + I I S
Sbjct: 158 LNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKS 208
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 84.2 bits (199), Expect = 3e-15
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTREL QQI + + R V+GG + Q +L +G +IATPGRLID
Sbjct: 194 LVLVPTRELVQQILLEFNKMLYRCFPRAVGVYGGQNRSRQIHELSKGCHFMIATPGRLID 253
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
FL++G + C +VLDEADRML H+ K LS
Sbjct: 254 FLDEGMLRMDHCHSVVLDEADRMLDMGFEHQIRKILS 290
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQPP 229
++TGSGKTLAY+LP + I N P
Sbjct: 151 SQTGSGKTLAYVLPIVNRILNSYP 174
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTREL+ QI A F + + VR V+GGA R Q +L RG ++++ATPGRL+D
Sbjct: 240 LILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMD 299
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+G +L+LDEADRML
Sbjct: 300 MFSRGYVRFSEIRFLILDEADRML 323
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 671
MGFEPQIR I++ D RQTL++SAT+P E+++LA +++ + + +G + S
Sbjct: 325 MGFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVG-ST 383
Query: 672 NHNILQIV 695
NI Q V
Sbjct: 384 TENITQDV 391
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLM 198
Score = 32.7 bits (71), Expect = 9.0
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
Frame = +2
Query: 161 RTGSGKTLAYILPAI----VHINNQPPIRRG 241
+TGSGKT +Y++PAI ++I+N+PP G
Sbjct: 202 QTGSGKTASYLIPAINEILLNISNRPPYSPG 232
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELA QI + +G +R VFGG Q L+ GVEI++ATPGRL+D
Sbjct: 85 LIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLD 144
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+ N + LVLDEADRML
Sbjct: 145 LVEQKAVNFSKTEILVLDEADRML 168
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/62 (35%), Positives = 41/62 (66%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF P I++++ + P RQ+LM+SAT+ E++KLA+ L ++I ++Q + N +I
Sbjct: 170 MGFLPDIKRVMALLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-AAVQNTVNESISH 228
Query: 690 IV 695
++
Sbjct: 229 VI 230
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/100 (45%), Positives = 57/100 (57%)
Frame = +1
Query: 247 SDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 426
+ LVL+PTRELA Q+ + G VR ++GGA R Q ++RG IV+ATPGR
Sbjct: 114 TQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGR 173
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
L+DFLE+ LQ +VLDEAD ML E LS
Sbjct: 174 LVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILS 213
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 146
+ FE V + MG+ PTPIQ Q PI ++G N
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGAN 83
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 83.4 bits (197), Expect = 5e-15
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA Q Q DF T+ + V+GG+P Q L+RG ++V+ TPGR+I
Sbjct: 117 LVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVI 176
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
D +EKG +L LVLDEAD ML E +++ A DRL
Sbjct: 177 DLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVE-TIASSAPDDRL 221
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 656
MGF + I DR T ++SAT P ++K+A ++L D +++ + +
Sbjct: 203 MGFAEDVETIASSAPDDRLTALFSATMPAAIEKVAREHLKDPVKVAVST 251
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F P+ + V MG++ PTPIQA P + +++VG+ +
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQ 90
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 83.4 bits (197), Expect = 5e-15
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTREL QI VA +++R+ V GG R Q D RG +IATPGRL D
Sbjct: 181 LVLAPTRELVNQITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGRLKD 240
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
++G +L+ C LV+DEADRML
Sbjct: 241 LTDRGIFSLKYCNKLVIDEADRML 264
Score = 40.3 bits (90), Expect = 0.045
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIR--PDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 653
MGFEPQIR+II + R T M+SAT+PK V LA + ++ +I +G
Sbjct: 266 MGFEPQIREIINNLPSVSKRHTSMFSATFPKSVMSLASKLMKPNFGEITVG 316
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 83.4 bits (197), Expect = 5e-15
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA+Q+Q +F +R ++GG Q R LER ++V+ATPGRL+D
Sbjct: 73 LVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLLD 131
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+GT +L LVLDEADRML
Sbjct: 132 HIERGTIDLGDVEILVLDEADRML 155
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 632
MGF + +II++ DRQT+M+SAT K+++ L+ Y+ +
Sbjct: 157 MGFIDDVEEIIDECPSDRQTMMFSATVSKDIQYLSSKYMNN 197
Score = 32.7 bits (71), Expect = 9.0
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
++ F++ D + + ++ ++EPT IQ P+ + GK+++G
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIG 44
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QI+Q + ++++ V GG K Q + + G++++IATPGRL D
Sbjct: 164 LILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTD 223
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ G +L + +LVLDEADRML
Sbjct: 224 LMRDGLVDLSQTRWLVLDEADRML 247
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF +++I + +RQT ++SAT PKE+ LAE L D +++ + +A+ I Q
Sbjct: 249 MGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGATAS-EITQ 307
Query: 690 IV 695
+V
Sbjct: 308 VV 309
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELAQQ+ + + +R CV+GG Q LE G +I+IATPGRL+D
Sbjct: 81 LILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLD 140
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L G N+ + LVLDEADRML
Sbjct: 141 HLFNGNVNISKTGVLVLDEADRML 164
Score = 38.7 bits (86), Expect = 0.14
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 671
MGF P +++I+ ++ D+Q +++SAT+ K +K +A + +++ + +A
Sbjct: 166 MGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTA 219
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+++ + G ++ ++G +P Q +L++ IV+ TPGR++D
Sbjct: 76 LVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLD 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+EKGT +L+R YLV+DEAD ML
Sbjct: 136 HIEKGTLSLERLKYLVIDEADEML 159
Score = 39.9 bits (89), Expect = 0.060
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+ MGF Q+ II+++ R T+++SAT P++V++L+ Y+ I I
Sbjct: 159 LNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEI 207
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA QIQ D VR+ C++GGAP +Q L++ +IV+ATPGRL+
Sbjct: 84 LVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQIVVATPGRLM 143
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
D +++ T L + +VLDEADRML H + L +
Sbjct: 144 DHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQ 182
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 426
+CLVL PTRELAQQ+ Q A + T VR V GG P +Q L RG IV+ TPGR
Sbjct: 78 ECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGKQMASL-RGARIVVGTPGR 136
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRML 507
L+D ++G NL T L++DEADRML
Sbjct: 137 LLDLAQQGKLNLSTVTTLIVDEADRML 163
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 83.0 bits (196), Expect = 6e-15
Identities = 33/64 (51%), Positives = 50/64 (78%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQIRK++ IRPDRQT+M SATWP V++LA+ Y+ + +Q+ +G+L L+A H + Q
Sbjct: 486 MGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQ 545
Query: 690 IVDI 701
+++
Sbjct: 546 QIEV 549
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELA QI++ + ++ C++GG +R Q ++ GVEI+IATPGRL D
Sbjct: 402 LVMAPTRELALQIEKEVFKYQFRD-IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLND 460
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ ++ TYLVLDEADRML
Sbjct: 461 LVAANVIDITSITYLVLDEADRML 484
Score = 54.4 bits (125), Expect = 3e-06
Identities = 20/53 (37%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = +3
Query: 12 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ NP+Q FE+A +P+ +++ +K G+ +P+PIQAQ WP+ + G++L+G+ +
Sbjct: 317 IPNPVQTFEQAFHEYPELLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQ 368
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGD 244
+TG+GKTLA++LPA +HI Q P+ RG+
Sbjct: 368 QTGTGKTLAFLLPAFIHIEGQ-PVPRGE 394
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTREL+ QI A + S +R V+GGAP R+Q +L++G +I+I TPGRL+D
Sbjct: 217 LVVAPTRELSMQIFDEARRLCYRSMLRPCVVYGGAPVRDQREELQKGCDILIGTPGRLLD 276
Query: 436 FLEK-GTTNLQRCTYLVLDEADRMLVWD 516
F++K +L+R Y ++DEAD +L D
Sbjct: 277 FMDKPHILSLRRVRYTIIDEADELLQSD 304
Score = 35.1 bits (77), Expect = 1.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 18 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 140
NP++ F++A +++ ++ Y PTPIQA P ++G
Sbjct: 130 NPVKNFDDAGLHPIMRENIRLCRYNVPTPIQAYAIPAILTG 170
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTRELA QI + F + + C FGG+ Q +L++G +I++ TPGR+ID
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIID 453
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L + TNLQR TYLVLDEADRM
Sbjct: 454 LLAANSGRVTNLQRVTYLVLDEADRM 479
Score = 59.3 bits (137), Expect = 9e-08
Identities = 26/64 (40%), Positives = 48/64 (75%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+ K+ ++RPDRQT+++SAT+P++++ LA+ L + ++I +G + + A+ I Q
Sbjct: 482 MGFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISVVAS-EITQ 540
Query: 690 IVDI 701
V++
Sbjct: 541 KVEL 544
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL+++LP + HI +QPP+RRGDGPI
Sbjct: 362 KTGSGKTLSFVLPLLRHIQDQPPLRRGDGPI 392
Score = 36.3 bits (80), Expect = 0.73
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVK-TMGYKEPTPIQAQGWPIAMSGKNLVGV 158
GV PI + + P + ++ + Y P+ IQAQ P MSG++++GV
Sbjct: 308 GVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGV 360
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 83.0 bits (196), Expect = 6e-15
Identities = 44/99 (44%), Positives = 57/99 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QI + A FG + + GG E + GV IV+ATPGRLID
Sbjct: 241 LILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLID 300
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKY 552
LE+G NL C + +DEAD+M+ KS +S+ Y
Sbjct: 301 SLERGIINLSNCYFFTMDEADKMIDMGF-EKSLQSILNY 338
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G ++ NP++ + E+ P + +K +GY PTPIQ P+A++G+++VG+ E
Sbjct: 146 GGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAE 200
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 82.6 bits (195), Expect = 9e-15
Identities = 42/96 (43%), Positives = 59/96 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QIQ+ +G +R+ +FGG ++ Q L++GV+I++ATPGRL+D
Sbjct: 76 LILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLD 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSL 543
+G +L R VLDEADRML H + L
Sbjct: 136 LQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVL 171
Score = 41.5 bits (93), Expect = 0.020
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQPLCT 212
F E + + + +GY++P+PIQ + P A++G++++G + K +C
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGK----TCA-FAA 57
Query: 213 *ITNRLFGEVM----VRLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASP 380
I RL G++ +R L + ++ S + H+ V +
Sbjct: 58 PILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVD 117
Query: 381 GLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPD 560
L +G + G+G L+ + IF + MGF +R++++ +
Sbjct: 118 KLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAV 177
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+QTL +SAT P EV L L + +++ +
Sbjct: 178 KQTLFFSATMPPEVMDLVNGLLKNPVKVAV 207
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 82.6 bits (195), Expect = 9e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+ + + +R+T V+GG Q + L RGVE+VIATPGRL+D
Sbjct: 100 LILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLD 159
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ + NL + LVLDEADRML
Sbjct: 160 HVQQKSINLGQVQVLVLDEADRML 183
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF P +++II + RQ L++SAT+ E++KLA+ ++ I + + + + + NI Q
Sbjct: 185 MGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV-ARRNATSENIKQ 243
Query: 690 IV 695
++
Sbjct: 244 VI 245
Score = 39.9 bits (89), Expect = 0.060
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ + + A PD +Q+ + GY +PTPIQA+ P+ M+G +++G +
Sbjct: 20 VTFADFALHPD-IQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQ 65
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
C+VLAPTRELA+Q+ G++ ++ CV+GG P REQ L G ++VI TPGR+
Sbjct: 165 CVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMK 224
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D LE+ T + + + VLDEAD ML
Sbjct: 225 DHLERKTLMMDKLKFRVLDEADEML 249
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 82.6 bits (195), Expect = 9e-15
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA QI A F + + +R V+GG R+QA+ L++G +I+IA+PGRLI
Sbjct: 209 VIICPTRELAVQIFNEARKFCYRTMLRPCVVYGGGALRDQAQQLQKGCDILIASPGRLIH 268
Query: 436 FLEK-GTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
F+ K T L+R Y+V+DEAD ML+ D + + LS
Sbjct: 269 FINKPETLTLRRVRYMVIDEADEMLMDDWSEELTTILS 306
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 82.6 bits (195), Expect = 9e-15
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QI++ F T ++ C +GG+ Q +L+RGV +++ATPGRLID
Sbjct: 465 LVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLID 524
Query: 436 FLEKG---TTNLQRCTYLVLDEADRM 504
L T L+R T++VLDEADRM
Sbjct: 525 LLAANGGRITTLRRTTFVVLDEADRM 550
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/62 (45%), Positives = 48/62 (77%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI+KI QIRPD+QT+++SAT+P+++++LA+ L + I+I +G + + A+ +
Sbjct: 553 MGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQE 612
Query: 690 IV 695
I+
Sbjct: 613 II 614
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL+Y+LP + HI +Q + G+GPI
Sbjct: 433 KTGSGKTLSYVLPMVRHIQDQLFPKPGEGPI 463
Score = 37.5 bits (83), Expect = 0.32
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKT-MGYKEPTPIQAQGWPIAMSGKNLVGV 158
G V P + + P+ V ++ +G+ +P+PIQ Q PI +SG++++GV
Sbjct: 379 GKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGV 431
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 82.6 bits (195), Expect = 9e-15
Identities = 42/104 (40%), Positives = 65/104 (62%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+++ + G ++ T VFG + +Q +L++ IV+ TPGR++D
Sbjct: 74 LILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLD 133
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
+EKGT L R +YLV+DEAD ML + E ++ K+ T+R
Sbjct: 134 HIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVE-AIIKHLPTER 176
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL--GDYIQINIGSLQL-SAN 674
+ MGF Q+ II+ + +R T+++SAT P++++KL+ Y+ ++I++ L +
Sbjct: 157 LNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIE 216
Query: 675 HNILQI 692
H ++Q+
Sbjct: 217 HAVIQV 222
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+D
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLD 136
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ + LVLDEADRML
Sbjct: 137 LVQQNVVKFNQLEILVLDEADRML 160
Score = 40.3 bits (90), Expect = 0.045
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF I+KI+ + RQ LM+SAT+ E+++LA+ + ++I++ +AN
Sbjct: 162 MGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+Q+ V GY P+PIQAQ P ++GK+++ +
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/106 (41%), Positives = 60/106 (56%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLVL+PTRELA Q + F + +R ++GG+ R Q +LERG +I +ATPGRL
Sbjct: 332 CLVLSPTRELAVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGRLT 391
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
D +E+ YLVLDEADRML + + + LS T +
Sbjct: 392 DLVERRKIVFSCIKYLVLDEADRMLDMGFSPQIKSILSHPTMTSNV 437
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +3
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
RQT+M+SAT+PKE+++LA ++L DYI + +G + S N I Q
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAVGRVG-STNEFIKQ 547
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++LAPTRELAQQI+ A F + + GG EQ+ L G EI+IATPGRL+D
Sbjct: 459 IILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVD 518
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+ L +C Y+++DEADRM+
Sbjct: 519 CIERRILVLSQCCYVIMDEADRMI 542
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+GV
Sbjct: 369 GGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGV 420
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPI-----RRGDGP 250
TGSGKT A++LP +V+I P + R+ DGP
Sbjct: 423 TGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGP 456
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV++PTRELA QI ++ CV+GG PK EQ L++ ++V+ATPGRL+D
Sbjct: 186 LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLD 244
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L++G+ +L + YLVLDEADRML
Sbjct: 245 LLQEGSVDLSQVNYLVLDEADRML 268
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRPD-RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNIL 686
GFE I+ II + RQTLM++ATWPKEV++LA ++ + I+++IG+ QL+AN I
Sbjct: 271 GFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRIT 330
Query: 687 QIVDI 701
QIV++
Sbjct: 331 QIVEV 335
Score = 39.5 bits (88), Expect = 0.079
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
P+ F+ + +Q + + +PTPIQA WP +SGK++VGV E
Sbjct: 112 PLLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAE 157
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/72 (54%), Positives = 49/72 (68%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI A F + S+VR V+GGA +Q RDLERG +++ATPGRL+D
Sbjct: 174 LVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVD 233
Query: 436 FLEKGTTNLQRC 471
+E+G L C
Sbjct: 234 MMERGKIGLDYC 245
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLI 432
L+LAPTREL QI + A G + V V+GGA +Q L+RG +IV+ATPGRLI
Sbjct: 172 LILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLI 231
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
DF K N C LV+DEADRML
Sbjct: 232 DFHNKRLVNFDNCQTLVIDEADRML 256
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEDYLGD 632
MGF P +R+I+ + + DRQTLM+SAT +V L+ + D
Sbjct: 258 MGFIPDVRRIVSWMPKKRDRQTLMFSATISSDVNNLSAQWCVD 300
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
L+LAPTRELAQQI Q+ H + VFGGA Q RD+ RG +I++ATPGRL+
Sbjct: 86 LILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGAQIIVATPGRLM 145
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
D +++ L Y+VLDEAD ML + LSK
Sbjct: 146 DLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSK 184
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QI + + +R GG +R Q RD+ G IV+ATPGRL D
Sbjct: 76 LILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYD 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+ +G NL L+LDE+DRML
Sbjct: 136 FMSRGLINLTTVRMLILDESDRML 159
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/89 (30%), Positives = 49/89 (55%)
Frame = +3
Query: 435 FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 614
F+ +G LT V + + MGF P I++II + +RQTL++SAT VK+L
Sbjct: 136 FMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Query: 615 EDYLGDYIQINIGSLQLSANHNILQIVDI 701
E ++ + ++I +GS+ + L + ++
Sbjct: 196 ETHVRNAVRIELGSISKPSEQVDLHLYEV 224
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++AP+RELA QI F R V GG QA +L +GVEI+I TPGR+ D
Sbjct: 661 LIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHD 720
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LEK T L +C Y++LDEADRM+
Sbjct: 721 CLEKAYTVLNQCNYVILDEADRMM 744
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+G+ E
Sbjct: 579 PIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 626
Score = 32.7 bits (71), Expect = 9.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPI 232
TGSGKT A++LP + ++ PP+
Sbjct: 627 TGSGKTAAFVLPMLAYVKQLPPL 649
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRL 429
LV+APTRELA Q ++ A G + + C++GG K+EQ R L + V IV+ TPGR+
Sbjct: 243 LVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRV 302
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+D G+ +L TYLVLDEADRML
Sbjct: 303 LDMARDGSLDLSGVTYLVLDEADRML 328
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRP---DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 683
GFEP IR II + R T M+SATWP V+ LAE ++ +++ +GS +LSAN +
Sbjct: 331 GFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRV 390
Query: 684 LQIVDI 701
Q V++
Sbjct: 391 EQTVEV 396
Score = 38.3 bits (85), Expect = 0.18
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
V++ + + G+ PTPIQA WP+ + K++VG+ E
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAE 204
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 81.4 bits (192), Expect = 2e-14
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ +++ + +++ C++GG + Q +DL +G +I+IATPGRL D
Sbjct: 319 LVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHD 377
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNLL 615
L+ TYLVLDEAD+ML + K L + DR L K +
Sbjct: 378 LQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLD-VRPDRQTVMTSLPVCKVEPVE 436
Query: 616 RITWEI-TFRSI*DHY 660
+ +++ FRS+ DHY
Sbjct: 437 QNSFDFRAFRSVADHY 452
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +3
Query: 18 NPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
NP FE+A +P+ V + ++ G+++PTPIQ+Q WPI + G +L+GV +
Sbjct: 237 NPTCNFEDAFHCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQ 286
Score = 40.3 bits (90), Expect = 0.045
Identities = 15/31 (48%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRG-DGP 250
+TG+GKTL+Y++P +HI++QP ++R +GP
Sbjct: 286 QTGTGKTLSYLMPGFIHIDSQPVLQRARNGP 316
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/96 (39%), Positives = 60/96 (62%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTRELA Q++ +D G VR + +FG ++Q +L++ V IV+ATPGR++D
Sbjct: 75 LIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILD 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSL 543
+ +G+ L+ YLV+DEAD+M + EK L
Sbjct: 135 HINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKIL 170
Score = 39.9 bits (89), Expect = 0.060
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQI 692
GF Q+ KI+ + ++ ++SAT +E+K + E Y+ DY INI + N QI
Sbjct: 161 GFVEQMEKILLNLPKEKIVSLFSATIDEEIKYICEKYMLDYSVINIEENESDTNQKTRQI 220
Query: 693 VD 698
D
Sbjct: 221 DD 222
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA+QIQ V G + +R+ ++GG + Q + L RGVEI + PGRL+D
Sbjct: 74 MIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLD 133
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
LE+GT L+ L+LDEAD+M
Sbjct: 134 HLERGTLTLEHLDMLILDEADQM 156
Score = 40.7 bits (91), Expect = 0.034
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F+ F + G++ +GY PTPIQ Q P A+ G++++G+ +
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQ 46
Score = 40.7 bits (91), Expect = 0.034
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGF P +R+I+ RQT+++SAT P ++ LA + L + I IG
Sbjct: 159 MGFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAREALREPQTIQIG 206
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTREL QQI F +R V+GG+ +Q +L+RG EIV+ TPGR+ID
Sbjct: 606 LVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMID 665
Query: 436 FL--EKG-TTNLQRCTYLVLDEADRM 504
L G TNL+R T+LV+DEADRM
Sbjct: 666 ILCTSSGKITNLRRVTFLVMDEADRM 691
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/64 (45%), Positives = 47/64 (73%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI +II+ IRP+RQT+++SAT+P++V+ LA L ++I +G + N +I Q
Sbjct: 694 MGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQ 752
Query: 690 IVDI 701
+V++
Sbjct: 753 LVEV 756
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL ++LP + HI +QPP+ GDGPI
Sbjct: 574 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPI 604
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V PI+++ + + +K + Y++P PIQ Q PI MSG++ +GV
Sbjct: 521 GKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGV 572
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/97 (41%), Positives = 60/97 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QI+ A F + V GG +EQA ++ G E+++ATPGRL+D
Sbjct: 243 LILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLD 302
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+++ L +C Y+V+DEADRM+ + +K L+
Sbjct: 303 VIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLA 339
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++GV E
Sbjct: 154 GGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAE 208
Score = 33.5 bits (73), Expect = 5.2
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 20/85 (23%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQI-----RPD---------------RQTLMWSATWPKEVKKLAEDY 623
V MGFE Q++K++ + +PD RQT+M++AT P ++KLA+ Y
Sbjct: 326 VDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEKLAKKY 385
Query: 624 LGDYIQINIGSLQLSANHNILQIVD 698
L + IGS A + Q+V+
Sbjct: 386 LRRPGIVTIGSAG-QAGSTVTQLVE 409
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Frame = +1
Query: 187 LHLASHCAHK*PTA--YSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 360
L + +H H TA + E +C+++APTREL QI A F + VR ++GG
Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 403
Query: 361 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKS 540
R + +G I+ ATPGRL+D + K L++ YLVLDEADRML + +K
Sbjct: 404 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKL 463
Query: 541 LS 546
+S
Sbjct: 464 IS 465
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/55 (38%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +3
Query: 510 MGFEPQIRKIIE----QIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSL 659
MGF P+++K+I + RQTLM+SAT+P+E+++LA ++L +Y+ + +G +
Sbjct: 454 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQV 508
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
FEEAN + + GY + TP+Q PI ++G++L+
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 329
>UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 370
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQ+ KII + +R TLMWSATWP+EV+ LA +Y+ DYIQ+ IG L N I Q
Sbjct: 1 MGFEPQLNKIIPKTHKNRHTLMWSATWPREVRSLANNYMKDYIQVTIGDDSLKGNIKIKQ 60
Query: 690 IVDI 701
V++
Sbjct: 61 TVEV 64
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
+ L+LAPTREL QI Q + F + + +GG + +QA+ ++R +I++A PGRL
Sbjct: 179 EILILAPTRELVMQIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPGRL 238
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
DFL++G +L + TYLV+DEADR+L
Sbjct: 239 KDFLQEGILDLSKVTYLVIDEADRLL 264
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
MGFE +R I+++ R DRQT+ +SATWPK V+ L+ D+ D I + +G L+ N NI
Sbjct: 266 MGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNID 325
Query: 687 QIVDIC 704
Q + IC
Sbjct: 326 QEI-IC 330
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 48 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
FP +Q + + ++ PTPIQ+ +P+ +SG +L+GV E
Sbjct: 107 FPPQIQNVIDGLNFRAPTPIQSVVFPLILSGYDLIGVAE 145
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELAQQI+ F +R + GG +QA L G EIVIATPGRL D
Sbjct: 347 LILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKD 406
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+ L +CTY+V+DEAD+M+
Sbjct: 407 CIERHVLVLSQCTYVVMDEADKMV 430
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + ++L+G+ E
Sbjct: 259 GGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAE 312
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVL PTRELA Q+ + +G + S + ++GG+ Q L RG ++V+ TPGR+I
Sbjct: 85 LVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMI 144
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
D LE+ T +L R +LVLDEAD ML E+ LS+
Sbjct: 145 DHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSE 183
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGF + +I+ + +Q ++SAT P ++KL+ YL D ++
Sbjct: 171 MGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEV 215
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/103 (37%), Positives = 61/103 (59%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L LAPTRELA+QI + G ++ TC++GG Q + RG+++V+ TPGR++D
Sbjct: 178 LALAPTRELAKQISEYFEAIG--PHLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGRILD 235
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTD 564
++ K T +L + ++VLDE DRML E+ L +T+
Sbjct: 236 YIRKNTLDLSKLKHVVLDEVDRMLDMGFAESVEEILGAAYKTE 278
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQ+ A + + + VFGG +Q R LE+ V++VI TPGR+ID
Sbjct: 203 LVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGTPGRIID 262
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ G+ L + LV+DEADRML
Sbjct: 263 YSRGGSLKLSKVEVLVIDEADRML 286
Score = 36.3 bits (80), Expect = 0.73
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEDYLGD 632
MGF P +++I+ Q+ + +RQTL++SAT + +LA +L +
Sbjct: 288 MGFIPDVKRIVSQLPRKGERQTLLFSATLEDHILRLASGWLAE 330
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTREL QQI++ +F R + GG +QA + +G EI+IATPGRL D
Sbjct: 493 LVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLND 552
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LEK L +C Y+VLDEAD M+
Sbjct: 553 CLEKRYLVLNQCNYIVLDEADMMI 576
Score = 53.6 bits (123), Expect = 5e-06
Identities = 18/49 (36%), Positives = 38/49 (77%)
Frame = +3
Query: 18 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G++++G+ E
Sbjct: 410 NPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAE 458
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRR---GDGP 250
TGSGKT A+++P +++I+ QP + + DGP
Sbjct: 459 TGSGKTCAFVIPMLIYISKQPRLTKDTEADGP 490
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
+ +++APTREL QI A F + + VR V+GG Q R++ +G IV TPGRL
Sbjct: 357 EAIIVAPTRELINQIFLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRL 416
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+D +++G L + YLVLDEADRML
Sbjct: 417 LDVIQRGWIGLTKLRYLVLDEADRML 442
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 5/53 (9%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 653
MGFEP +R+++ + +RQTL++SAT+P++++KLA D+L DY+ + +G
Sbjct: 444 MGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFLKTDYLFLAVG 496
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLI 432
L+L PTRELA QI+ F ++ C++GG R+ Q +L R I++ATPGRL+
Sbjct: 176 LILVPTRELAMQIESEIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLL 235
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
DFL +G T L +YLV+DEADR+L
Sbjct: 236 DFLREGATTLANVSYLVIDEADRLL 260
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNIL 686
+GFE IR+I++QIR DRQT+ +SATWPK VK LA D+ I + IG L+ N NI
Sbjct: 262 LGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIGKSNLTINKNID 321
Query: 687 QIVDIC 704
Q + IC
Sbjct: 322 QEI-IC 326
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+V P + A FP + + ++ + +K PT IQ+ +PI ++G +++G+ +
Sbjct: 88 KVPPPFLSWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYDVIGIAQ 139
Score = 33.5 bits (73), Expect = 5.2
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQ 223
+TGSGKT+AY+LP ++ I +Q
Sbjct: 139 QTGSGKTIAYLLPGLIQITSQ 159
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
L+LAPTRELA QI + F +R C GG+ ++Q DL+RGVEIV+ATPGRLI
Sbjct: 355 LILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATPGRLI 414
Query: 433 DFLEKGTTNL---QRCTYLVLDEADRM 504
D L + L +R T++V+DEADR+
Sbjct: 415 DILTLNSGKLISTKRITFVVMDEADRL 441
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI +I++ +RPD+Q +++SAT+P +++ A L D + + I S L N N+ Q
Sbjct: 444 MGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAARILTDPLTVTINSNNL-VNENVNQ 502
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 75 KTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
K + Y EPT IQ+Q P MSG++L+G+
Sbjct: 293 KELKYDEPTAIQSQAIPAIMSGRDLIGI 320
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+ PTRELA QI++ F + + G +QA L +G EIVIATPGRL+D
Sbjct: 290 LVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLD 349
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWD 516
LE+ L +C YLVLDEADRM+ D
Sbjct: 350 CLERRYVVLNQCNYLVLDEADRMIDMD 376
Score = 35.1 bits (77), Expect = 1.7
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIR 235
TGSGKT A++LP + +I+ PP+R
Sbjct: 256 TGSGKTAAFVLPMLAYISRLPPMR 279
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA Q+ + DF H V ++GG Q R L +G +IV+ TPGRL+
Sbjct: 78 LVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLL 137
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L++GT +L + + LVLDEAD ML
Sbjct: 138 DHLKRGTLDLSKLSGLVLDEADEML 162
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 656
MGF + I+ QI QT ++SAT P+ ++++ ++ + ++ I S
Sbjct: 164 MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQS 212
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 80.2 bits (189), Expect = 5e-14
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+V AP RELA+QI FG +R+ VFGG Q L+RG EIV+ TPGR+ID
Sbjct: 217 IVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMID 276
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L TNL+R T++VLDEADRM
Sbjct: 277 ILVTNNGRITNLRRVTFVVLDEADRM 302
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF PQI++IIE IRPD+Q +M+SAT+P V++ A ++L I+I G + ++ I Q
Sbjct: 305 MGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEIICGG-RSQVSNTIEQ 363
Query: 690 IVDI 701
IV++
Sbjct: 364 IVEV 367
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAY +P I H+ Q P+ +G+GPI
Sbjct: 185 KTGSGKTLAYTIPLIKHVMAQRPLSKGEGPI 215
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G PI+ + E +K + Y++P+P+Q Q P+ MSG + +
Sbjct: 132 GKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDAI 181
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 80.2 bits (189), Expect = 5e-14
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG---APKREQARDLERGVEIVIATP 420
D LVL PTRELA QI Q F + V + V+GG A +Q + L G IVIATP
Sbjct: 72 DTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATP 131
Query: 421 GRLIDFLEKGTTNLQRCTYLVLDEADRML 507
GRL+ L+ GT NL++ +LVLDEADRML
Sbjct: 132 GRLLAQLQSGTANLKQIKHLVLDEADRML 160
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF I ++I + +RQT+M+SAT P +++ LA + D QINI
Sbjct: 162 MGFYDDIVRVISYLPTERQTIMFSATMPTKMRALANKLMKDPQQINI 208
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
F + NF + + +MG+ +PTPIQ + P+ MS +LV
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLV 42
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 80.2 bits (189), Expect = 5e-14
Identities = 41/97 (42%), Positives = 56/97 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + ++G +++T VFGG Q L RG +I+IATPGR++D
Sbjct: 81 LVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMD 140
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+ + LVLDEADRML H +K L+
Sbjct: 141 LYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILA 177
Score = 37.5 bits (83), Expect = 0.32
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF I+KI+ + RQ L++SAT+ E+++LA+ + + I+I++
Sbjct: 166 MGFIHDIKKILAILPKKRQNLLFSATFSPEIRQLAKGLVNNPIEISV 212
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
C+VLAPTRELA+Q++ F + CV+GG P +Q L RGV+IV+ TPGR++
Sbjct: 104 CIVLAPTRELAKQVENEI--FITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPGRIM 161
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + + +L ++VLDEAD+ML
Sbjct: 162 DLMNRRALDLSEIEFVVLDEADQML 186
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
+ +GFE + I+ RQT ++SAT P+ VK++ + +L
Sbjct: 186 LNVGFEEDVEAILHDCPAGRQTFLFSATMPQWVKQITKKFL 226
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
+ ++++PTRELA QI + A F H S +++ V+GG Q L G I++ TPGRL
Sbjct: 488 EVVIISPTRELAIQIHREARKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRL 547
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
DF++KG + + +LDEADRML
Sbjct: 548 KDFVDKGFIDFSNVQFFILDEADRML 573
Score = 39.9 bits (89), Expect = 0.060
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 435 FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQ--IRP--DRQTLMWSATWPKEV 602
F+ KG + V F + MGF I I + + P R TLM+SAT+P +V
Sbjct: 550 FVDKGFIDFSNVQFFILDEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDV 609
Query: 603 KKLAEDYLGDYIQINIGSL 659
+K+A YL DY+ + G++
Sbjct: 610 QKIAGKYLHDYVFVTTGNI 628
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G V N I FE A D V Q +K GY +PTP+Q + ++ ++L+
Sbjct: 401 GNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDLI 450
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAP+RELA QI F R+ V GG QA +L +G EI+I TPGR+ D
Sbjct: 419 LILAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKD 478
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L++ T L +C Y++LDEADRM+
Sbjct: 479 CLDRAYTVLSQCNYVILDEADRMI 502
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+G+
Sbjct: 331 GGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGI 382
Score = 32.7 bits (71), Expect = 9.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPI 232
TGSGKT A++LP + ++ PP+
Sbjct: 385 TGSGKTAAFVLPMLTYVKKLPPL 407
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 80.2 bits (189), Expect = 5e-14
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELA QI ++ +R V+GG+P EQ L+RGVEIV TPGRLI+
Sbjct: 465 LIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIE 524
Query: 436 FL--EKG-TTNLQRCTYLVLDEADRM 504
L G TNL+R T++V+DEADRM
Sbjct: 525 VLTISNGKVTNLRRVTFVVIDEADRM 550
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
+GF PQI I++ IRPDRQT ++SAT+P ++ LA+ L +QI +G SA+
Sbjct: 553 LGFSPQISAIVDNIRPDRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKSAS 607
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
TGSGKT+AY+LPAI H+ QP +R +G IV
Sbjct: 434 TGSGKTMAYLLPAIRHVLYQPKLRENEGMIV 464
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
PI F + PD + ++ Y++P PIQ Q P M G++++ + E
Sbjct: 386 PIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAE 433
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+ +V+ G S +R V+GG +Q + RG I++ TPGR +D
Sbjct: 73 LILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLD 132
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++G N + +Y VLDEAD ML
Sbjct: 133 LIDRGILNFDKVSYFVLDEADEML 156
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
FEE N + + + ++ GY EPT +Q+ PIA++G +LV
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
Score = 36.3 bits (80), Expect = 0.73
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
MGF I+KII + +RQ+ ++SAT P E+ +LA+ ++
Sbjct: 158 MGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFM 196
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/96 (40%), Positives = 59/96 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA QI + +G + +++ +FGG ++ Q L G++I++ATPGRL+D
Sbjct: 75 LVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLD 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSL 543
+ +G +L + VLDEADRML H ++ L
Sbjct: 135 LISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRIL 170
Score = 40.3 bits (90), Expect = 0.045
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
FE N + + + ++ GY PTPIQ Q PI + GK+L+G
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLG 43
Score = 35.9 bits (79), Expect = 0.97
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
MGF I++I++ + RQTL +SAT P E++ LA L
Sbjct: 160 MGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSML 198
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVL PTRELA Q+ A+ +G H +R + GG +Q L + EI++ATPGRL+
Sbjct: 141 LVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLL 200
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D LE+G +L LVLDEADRML
Sbjct: 201 DHLERGRIDLSELKMLVLDEADRML 225
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/98 (39%), Positives = 57/98 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + + C+FGG Q + + +GV++++A PGRL+D
Sbjct: 83 LVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNPQVQAMAKGVDVLVACPGRLLD 142
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
+G+ +L R LVLDEADRML H +K L++
Sbjct: 143 LAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR 180
Score = 35.9 bits (79), Expect = 0.97
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +3
Query: 441 GKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAED 620
G+G L+ V I + MGF ++K++ ++ RQ L++SAT+ K++ LA+
Sbjct: 145 GQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARLPAKRQNLLFSATFSKDITDLADK 204
Query: 621 YLGDYIQINI 650
L + +I +
Sbjct: 205 LLHNPERIEV 214
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTREL Q++ DFG + VR+T + GG +Q DL G +IVIAT GRL+D
Sbjct: 74 LVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMD 133
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+++ L L+LDE DRML
Sbjct: 134 FIKEKEIRLDSVEVLILDEVDRML 157
Score = 41.9 bits (94), Expect = 0.015
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
F + P + +GV+ MGY +PTP+Q + P+ ++G++LV
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLV 42
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGF +++I+ RQTL +SAT P E++ +A L + +I IG
Sbjct: 159 MGFINDVKRIVGLCPKQRQTLFFSATIPPEIEDVARFALQNPERIEIG 206
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVL PTRELAQQ+ + +G +R +FGGA R+Q + L G IV+ATPGRL+
Sbjct: 81 LVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPGRLL 140
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +E+ + +L +VLDEAD ML
Sbjct: 141 DHIERRSIDLTGINAVVLDEADEML 165
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F PD++Q+ ++++GY+ TPIQA P+ + G+++VG+ +
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQ 54
Score = 35.9 bits (79), Expect = 0.97
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF + I+ + +R+ ++SAT PK V+ +A +L + +I++ + + N NI Q
Sbjct: 167 MGFIDDVDTILAKTPKERKVALFSATMPKRVRDIANKHLSNPAEISVAA-AATTNENIEQ 225
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+D
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLD 136
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
++ + LVLDEADRML
Sbjct: 137 LEQQKAVKFNQLEVLVLDEADRML 160
Score = 41.1 bits (92), Expect = 0.026
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF I+KI+ + RQ LM+SAT+ E+++LA+ + ++I++ +AN
Sbjct: 162 MGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+Q+ V GY P+PIQAQ P ++GK+++ +
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 79.8 bits (188), Expect = 6e-14
Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +1
Query: 160 QNGFRQNVG--LHLASHCAHK*PTAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYV 333
Q G + G L L H + P A R L+L PTRELA QI + D+ +
Sbjct: 46 QTGTGKTAGFTLPLLQHLITRQPHAKGRRPVR-ALILTPTRELAAQIGENVRDYSKYLNI 104
Query: 334 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVW 513
R+ VFGG Q L GV++++ATPGRL+D + L + LVLDEADRML
Sbjct: 105 RSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDM 164
Query: 514 DLNHKSEKSLSK 549
H + L+K
Sbjct: 165 GFIHDIRRVLTK 176
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I +
Sbjct: 164 MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 210
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 51 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
PD + + V GY+EPTPIQ Q P + G++L+
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLM 42
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTREL QQI F + V+GG+ +Q +L+RG EIV+ TPGR+ID
Sbjct: 473 LVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMID 532
Query: 436 FL--EKG-TTNLQRCTYLVLDEADRM 504
L G TNL+R TYLV+DEADRM
Sbjct: 533 ILCTSSGKITNLRRVTYLVMDEADRM 558
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI +I++ IRPDRQT+++SAT+P++V+ LA L ++I +G + N +I Q
Sbjct: 561 MGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQ 619
Query: 690 IVDI 701
+V+I
Sbjct: 620 LVEI 623
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTL ++LP + HI +QPP+ GDGPI
Sbjct: 441 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPI 471
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V PIQ++ + + +K + Y++P PIQAQ PI MSG++ +GV
Sbjct: 388 GKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGV 439
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA+Q+++ + Y+ CV+GG Q L RGV++V+ TPGR+ID
Sbjct: 184 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIID 241
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E + L YLVLDEAD+ML
Sbjct: 242 LIEGRSLKLGEVEYLVLDEADQML 265
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+ +GFE + I+E + RQ++++SAT P VKKLA YL + + I++
Sbjct: 265 LAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 313
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +1
Query: 250 DCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK---REQARDLERGVEIVIATP 420
+ +++APTRELAQQI Q F + V ++GG +Q R + G +IVIATP
Sbjct: 74 NAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATP 133
Query: 421 GRLIDFLEKGTTNLQRCTYLVLDEADRML 507
GRLI L G+ +L +Y VLDEADRML
Sbjct: 134 GRLISHLNLGSADLSHVSYFVLDEADRML 162
Score = 41.5 bits (93), Expect = 0.020
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF I +I +Q+ QT+M+SAT P +++KLA L D I++ I + +I+Q
Sbjct: 164 MGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIEVEIAISR--PPESIMQ 221
Query: 690 IVDIC 704
IC
Sbjct: 222 SAYIC 226
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
F+E N D V G+ M + E TP+QA P + G++++
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVI 42
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 79.4 bits (187), Expect = 8e-14
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LV+ PTRELAQQI +VA T +V T V GG + Q L+ G +I++ATPGRL+
Sbjct: 142 LVITPTRELAQQIDEVAGKIADVTGHVAVTVV-GGVSYKPQTAALKYGCDILVATPGRLV 200
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +E+G +L LVLDEADRML
Sbjct: 201 DLIEQGACHLDEVKVLVLDEADRML 225
Score = 38.3 bits (85), Expect = 0.18
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F+E D + + ++ +GY PTP+QA P+ + G++L+ +
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQ 91
Score = 37.5 bits (83), Expect = 0.32
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF P +R+I+ + +RQTL++SAT +E D + D ++ I +A+
Sbjct: 227 MGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTAD 281
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 79.4 bits (187), Expect = 8e-14
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELAQQI + + + T + GG P+ +Q L RGV+++IATPGR+ D
Sbjct: 452 LILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIATPGRVED 511
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
+E+G +L + VLDEAD M
Sbjct: 512 LIEQGRLDLSQVKVTVLDEADHM 534
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTREL QQ +V + G VR +GGAP+ QAR L G + ++A PGRL D
Sbjct: 166 LVLAPTRELVQQTTKVFQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGRLKD 224
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL+ G +++ ++LV DEADR+L
Sbjct: 225 FLDGGDVSIRNLSFLVFDEADRLL 248
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEDYLGD---YIQINIGSLQLSAN 674
MGF+ + +I+ + QT+MWSATWP+ V+ +A YL D I+ L N
Sbjct: 250 MGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQAMARKYLSDDRVLIRAGTAGAGLQVN 309
Query: 675 HNILQIVDIC 704
I Q + C
Sbjct: 310 ERIKQELIFC 319
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 79.4 bits (187), Expect = 8e-14
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELAQQ+ + V+GG+P+ Q +++++GV+IV+ PGR++D
Sbjct: 144 LVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVDIVVGCPGRVLD 203
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+E+G N+ + + L LDEAD+ML
Sbjct: 204 FIERGILNVSKISVLTLDEADKML 227
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 KDNGLQRTDAHSSSRLADSYVWKEFSWRTRTGSGKTLAYILPAIVHINNQ---PPIRRGD 244
+ G++R + Y K+ + +TG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 245 GPIV 256
P+V
Sbjct: 140 RPLV 143
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 79.4 bits (187), Expect = 8e-14
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSY----VRNTCVFGGAPKREQARDLERGVEIVIATPG 423
L+LAP RELA QI+ A + ++ +R + GG +QA L +GVEI+IATPG
Sbjct: 222 LILAPARELALQIEDEAQKLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPG 281
Query: 424 RLIDFLEKGTTNLQRCTYLVLDEADRML 507
R+ D LEK T L +C+Y++LDEADRM+
Sbjct: 282 RMQDCLEKTLTVLVQCSYVILDEADRMI 309
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/54 (31%), Positives = 36/54 (66%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++G+ E
Sbjct: 134 GKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMIGIAE 187
Score = 32.7 bits (71), Expect = 9.0
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQP 226
TGSGKT+A+++P I ++ N+P
Sbjct: 188 TGSGKTIAFLIPLISYVGNKP 208
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QIQ+ +R C GG P + Q +L G EIV+A PGRL D
Sbjct: 256 LVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKD 315
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L + L +C ++VLDEAD+M+
Sbjct: 316 LLNQSYLVLGQCYFVVLDEADKMI 339
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+ + E
Sbjct: 171 EVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIALAE 221
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINI---GSLQLSANHNILQIVD 698
R TLM+SAT P ++K+ +YL I I+I G++ + NIL + D
Sbjct: 380 RTTLMYSATMPSTLEKITNEYLRRPITISIGKTGNVAENVKQNILWVED 428
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 79.0 bits (186), Expect = 1e-13
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VLAPTRELA QI A F + R+ ++GGA K +Q R L G ++V+ATPGRL D
Sbjct: 176 IVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLND 235
Query: 436 FLE--KGTT---NLQRCTYLVLDEADRML 507
FLE G T + + Y+VLDEADRML
Sbjct: 236 FLEPPPGFTAPVSAVKAAYVVLDEADRML 264
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNI 683
MGFEPQI+KI + RQT+M++ATWPK V+K+A+ + +IQI G +L+AN +I
Sbjct: 266 MGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSI 325
Query: 684 LQIVDI 701
Q V++
Sbjct: 326 TQTVEV 331
Score = 53.2 bits (122), Expect = 6e-06
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
P F++A FP +++ +K GY PTPIQA+ WPI + GK++V +
Sbjct: 84 PYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAWPILLKGKDVVAI 129
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +1
Query: 259 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 438
+LAPTREL Q+ A F + S ++ ++GG QA L G +++ATPGRL DF
Sbjct: 534 ILAPTRELVVQLFTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDF 593
Query: 439 LEKGTTNLQRCTYLVLDEADRML 507
+++G N Q YL+LDEAD+M+
Sbjct: 594 IKRGKVNFQNLKYLILDEADKMI 616
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +3
Query: 504 VGMGFEPQIRKIIE--QIRPD--RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
+ MGF PQI IIE + P R TLM+SAT+P +++ LA +L DY+ + +G
Sbjct: 616 IDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLTVG 669
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G PIQ F EAN + + YKEPTPIQ P ++ ++++
Sbjct: 442 GTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILAKRDVM 491
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L+PTRELA QI + D+ + VFGG P Q R L+RG +I++ATPGRL+D
Sbjct: 83 LILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLD 142
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNH---KSEKSLSKYAQT 561
+++ L+ VLDEAD+ML H + +K L K QT
Sbjct: 143 LIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQT 187
Score = 53.6 bits (123), Expect = 5e-06
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQPLCT 212
F+ + Q + +GY +PTPIQAQ P + GK+L G+ + K + +
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHY 67
Query: 213 *ITN-RLFGEVMVRLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLG 389
TN + + R+ L + +++ + +C + H+ S + R L
Sbjct: 68 LATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLD 127
Query: 390 EGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQT 569
G+ + + + L V +F + +GF +R+I + + +RQT
Sbjct: 128 RGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQT 187
Query: 570 LMWSATWPKEVKKLAEDYLGDYIQINI 650
L +SAT PK +++L+ +L D + +++
Sbjct: 188 LFFSATMPKTIQELSSQFLSDPVTVSV 214
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLV+APTRELA QI +V G + +R C+ GG + Q + G++I++ATPGR+
Sbjct: 76 CLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADYGIDILVATPGRMF 135
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + + + R LVLDEAD ML
Sbjct: 136 DLIYQKHIKITRVKILVLDEADHML 160
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + +G R V+GGAP Q R L +GV++V+ATPGR +D
Sbjct: 132 LVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALD 191
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ +GT L +VLDEAD ML
Sbjct: 192 HMGRGTLRLDGLHTVVLDEADEML 215
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +3
Query: 438 LGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
+G+G +L +H + MGF I I+EQ RQT+++SAT P + ++A
Sbjct: 193 MGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIAR 252
Query: 618 DYLGDYIQINIG 653
+L D ++I IG
Sbjct: 253 RHLRDPVRIQIG 264
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
F E + + + +GY+EPTPIQ + P ++G++L+G
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLG 99
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/93 (47%), Positives = 54/93 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELA Q+QQ + R GG R +A+ LERG IV+ TPGRL D
Sbjct: 121 LIVAPTRELAMQVQQELLWLYGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLCD 180
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE 534
L +G NL R +VLDEAD ML DL + E
Sbjct: 181 HLGRGRLNLSRLRAVVLDEADEML--DLGFRDE 211
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/70 (25%), Positives = 39/70 (55%)
Frame = +3
Query: 438 LGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
LG+G L+ + + +GF ++ +I++ +R+TL++SAT +E+ LA+
Sbjct: 182 LGRGRLNLSRLRAVVLDEADEMLDLGFRDELEEILDATPAERRTLLFSATIAREIAALAK 241
Query: 618 DYLGDYIQIN 647
Y + ++I+
Sbjct: 242 RYQTNALRID 251
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI +G +R+ ++GG + Q + L+RG I++ATPGRL+D
Sbjct: 79 LVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLD 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ +G L + VLDEADRML
Sbjct: 139 LMNQGHIKLNQLEVFVLDEADRML 162
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +3
Query: 438 LGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
+ +GH +L + +F + MGF P +++II Q+ RQ+L +SAT ++ +LA
Sbjct: 140 MNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAH 199
Query: 618 DYLGDYIQINI 650
L + +N+
Sbjct: 200 SLLSKPVTVNV 210
Score = 36.3 bits (80), Expect = 0.73
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
F+E VQ+ + YK PTPIQAQ P A+ G++++G
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLG 44
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI A +G + V GGA QAR +E GV++++ATPGRL+D
Sbjct: 134 LVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLD 193
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ G L +VLDEAD+ML
Sbjct: 194 HVAAGVIRLDAVETVVLDEADQML 217
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 632
+GF P IR+I+ ++ RQ +M+SAT PK ++ LA ++L D
Sbjct: 219 LGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRD 259
Score = 34.3 bits (75), Expect = 3.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 66 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+ + Y+ PTPIQA+ P+ + G +LVG+ +
Sbjct: 70 RAISEQSYETPTPIQARSIPVMLEGHDLVGIAQ 102
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 78.6 bits (185), Expect = 1e-13
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 414
L++ P+RELA+QI + + G C+ GG P EQA+D+ G+ IV+A
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVVA 328
Query: 415 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
TPGRL D L K NL+ C YLVLDEADRML D+ + E KS+ + + R
Sbjct: 329 TPGRLSDMLTKKIINLEVCRYLVLDEADRML--DMGFEDEIKSIFYFFKAQR 378
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFE +I+ I + RQTL++SAT P++++ A+ L I +N+G +A+ N+LQ
Sbjct: 361 MGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQ 419
Score = 39.9 bits (89), Expect = 0.060
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + PI F E FP + + + K G PT IQ QG P+A+SG++++G+
Sbjct: 181 GDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGI 233
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
L+LAPTRELA QI + F + +R+ C GG+ ++Q DL+RG EIV+ATPGR I
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 433 DFLEKGTTNL---QRCTYLVLDEADRM 504
D L L +R T++V+DEADR+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRL 420
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEPQI +I++ +RPD+Q +++SAT+P +++ A L I I I S + N N+ Q
Sbjct: 423 LGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGM-VNENVKQ 481
Query: 690 IVDIC 704
IC
Sbjct: 482 KFRIC 486
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQPPIRRGD-GPI 253
++TGSGKT++Y+LP + + Q P+ + + GP+
Sbjct: 300 SKTGSGKTISYLLPLLRQVKAQRPLSKHETGPM 332
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
L+L+PTRELA QI + F G S +R+ C GG+ + Q D++RGVEIVIATPGR
Sbjct: 315 LILSPTRELALQIHEEVTKFTSGDPS-IRSLCCTGGSELKRQINDIKRGVEIVIATPGRF 373
Query: 430 IDFLEKGTTNL---QRCTYLVLDEADRM 504
ID L + NL +R ++V+DEADR+
Sbjct: 374 IDLLSLNSGNLINPKRIVFVVMDEADRL 401
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEPQ+ +I++ IRPD+Q +++SAT+P ++K A L D + I + S L N NI Q
Sbjct: 404 LGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYITVNSKSL-INENIEQ 462
Query: 690 IVDI 701
V+I
Sbjct: 463 KVEI 466
Score = 32.7 bits (71), Expect = 9.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 75 KTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
+ + + PTPIQAQ P MSG++++G+
Sbjct: 253 RELEFTVPTPIQAQAIPAIMSGRDVIGI 280
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELAQQ+ + + + V+GG R Q L +GV+I+IATPGRL+D
Sbjct: 81 LILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLLD 140
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L T+L + LVLDEADRML
Sbjct: 141 HLFTKKTSLNQLQMLVLDEADRML 164
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/55 (32%), Positives = 37/55 (67%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF P I++I++++ +RQTL++SAT+ VK LA + + +++ + + +A+
Sbjct: 166 MGFLPDIQRIMKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTAD 220
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTREL+ QI +G + +T GG P Q R L +GVE+++ATPGRL+D
Sbjct: 93 LVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLD 152
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
++ L +LVLDEADRML
Sbjct: 153 LVQSNGLKLGSVEFLVLDEADRML 176
Score = 55.2 bits (127), Expect = 1e-06
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 4/224 (1%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKRWPTSCQPLCT 212
F++ + + + + Y PTPIQAQ P A++G+++VG+ + K + L
Sbjct: 18 FQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHR 77
Query: 213 *ITNRLFGEVMV-RLFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLG 389
+ +R+ + R+ L + +S S + HI S + + R L
Sbjct: 78 LLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLM 137
Query: 390 EGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQT 569
+G + + +L +V + MGF IRKI+ ++ RQT
Sbjct: 138 QGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQT 197
Query: 570 LMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA---NHNILQI 692
L +SAT PK++ +LA+ L D ++ + + +A N ILQ+
Sbjct: 198 LFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQV 241
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QI Q D+ ++ V+GG ++ Q +E G++I++ATPGRL+D
Sbjct: 79 LILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLD 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E G N + VLDEAD ML
Sbjct: 139 LIETGDINFKALEVFVLDEADTML 162
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF ++ II ++ RQTL++SAT P E++ LAE L D +I I
Sbjct: 164 MGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQI 210
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 72 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
V GYK+PTPIQ + P ++G +L+G+ +
Sbjct: 17 VNLKGYKQPTPIQKECIPALINGNDLLGIAQ 47
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+V+APTRELA+Q+ + + G + V+GGA Q L RGV++V+ TPGRLID
Sbjct: 80 IVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLID 137
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE+G +L Y VLDEAD ML
Sbjct: 138 HLERGNLDLSAIQYAVLDEADEML 161
Score = 36.3 bits (80), Expect = 0.73
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+ +GF I I++Q RQT+++SAT E+ +LA YL + + +++
Sbjct: 161 LSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLREPVVVDL 209
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 62 ATRCKDNGLQRTDAHSSSRLADSYVWKEFSWRTRTGSGKTLAYILPAIVHI 214
A R + G+ + L + K+ R RTG+GKTLA+ LP I ++
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNL 62
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTREL QI + +G V+GG+ Q DL+RG EIV TPGR+ID
Sbjct: 194 MIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMID 253
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L G+ TNL+R TY+VLDEADRM
Sbjct: 254 LLTTGSGKITNLRRVTYMVLDEADRM 279
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI +I+ +RPDRQT+M+SAT+P ++ LA L + I+I IG + N +I Q
Sbjct: 282 MGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALDNPIEIQIGGKSV-VNSDIEQ 340
Query: 690 IVDI 701
+V++
Sbjct: 341 LVEL 344
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAYILP + HIN Q P+ GDGPI
Sbjct: 162 KTGSGKTLAYILPMLRHINAQEPLASGDGPI 192
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V PI+ + +A + V + ++ G+++P PIQAQ P+ MSG++ +GV
Sbjct: 109 GKKVPKPIKTWAQAGLNNRVHELIRRSGFEKPMPIQAQALPVIMSGRDCIGV 160
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-----RGVEIVIATP 420
LVLAPTRELA QI Q A FG + GG +E ++ RGV IV+ TP
Sbjct: 267 LVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVVGTP 326
Query: 421 GRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
GRL+D +E+ N +C YLV+DEADRM+ K ++ + ++L
Sbjct: 327 GRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLPKNEKL 376
Score = 37.5 bits (83), Expect = 0.32
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G ++ + + ++E+ + +K+ G+++PTP+Q PI++ +++VGV E
Sbjct: 177 GKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAE 230
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 77.8 bits (183), Expect = 2e-13
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QI A F VFGG + Q +L+RG EIV+ATPGRLID
Sbjct: 784 LILVPTRELATQIYLEAKPFLKAYKYEIVAVFGGTGIKGQLSELKRGCEIVVATPGRLID 843
Query: 436 FLEKGT---TNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
L TNL+R T +V+DEADRM +DL E ++K T R
Sbjct: 844 VLTTSNGKITNLKRITMVVIDEADRM--FDLGF--EPQIAKILATTR 886
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNIL 686
+GFEPQI KI+ RPD+QT+++SAT+PK V+ LA+ + +++ +G+ + A NI
Sbjct: 872 LGFEPQIAKILATTRPDKQTVLFSATFPKNVENLAKKLMRHKPVEVVVGA-RGQACTNIT 930
Query: 687 QIVDI 701
Q+++I
Sbjct: 931 QLIEI 935
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKTLAY+LP I H++ Q P++ GDGPI
Sbjct: 753 TGSGKTLAYLLPMIRHVSAQRPLQEGDGPI 782
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G EV PI+ + ++ D + + ++ Y +P PIQ Q P+ MSG++++
Sbjct: 687 GQEVPRPIKSWLQSGLSDRILEVLIEKKKYDKPFPIQCQSLPVIMSGRDMI 737
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/83 (48%), Positives = 48/83 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGRL D
Sbjct: 113 LVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLED 172
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
L + L +V+DEAD M
Sbjct: 173 LLRQQALTLSSVEVVVIDEADEM 195
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 632
MGF P +++++EQI PD Q +++SAT V ++ +L D
Sbjct: 198 MGFLPPVKRLLEQISPDAQHMLFSATLDHGVDEVVNTFLHD 238
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 119 LADSYVWKEFSWRTRTGSGKTLAYILPAIVHINN 220
L DS ++ R RTGSGKTLA+ +P + + +
Sbjct: 41 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGS 74
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/83 (48%), Positives = 48/83 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGRL D
Sbjct: 129 LVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLED 188
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
L + L +V+DEAD M
Sbjct: 189 LLRQQALTLSSVEVVVIDEADEM 211
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 632
MGF P +++++EQI PD Q +++SAT V ++ +L D
Sbjct: 214 MGFLPPVKRLLEQISPDAQHMLFSATLDHGVDEVVNTFLHD 254
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 119 LADSYVWKEFSWRTRTGSGKTLAYILPAIVHINN 220
L DS ++ R RTGSGKTLA+ +P + + +
Sbjct: 57 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGS 90
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+++ + G ++ V+G AP Q ++L++ +V+ TPGR+ID
Sbjct: 76 LVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGRIID 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
+EKGT + + YLV+DEAD M
Sbjct: 136 HMEKGTFDTSQIKYLVIDEADEM 158
Score = 36.7 bits (81), Expect = 0.55
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF QI II+ + R T++ SAT P ++ L+ Y+ D I I
Sbjct: 161 MGFVDQIETIIKDLSKKRVTMLLSATMPSAIETLSNRYMKDPIHAEI 207
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
L++APTREL QI + H VR V+GG+ +EQAR++ RG +IV+ATPGR+
Sbjct: 74 LIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQ 133
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + + ++ + +Y VLDEAD ML
Sbjct: 134 DMMRRRMVDITKLSYCVLDEADEML 158
Score = 41.9 bits (94), Expect = 0.015
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
+ MGF I I+ D+ T ++SAT P+EV ++A++++ D ++I +G
Sbjct: 158 LNMGFYEDITNILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVG 207
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTREL QI + A +G V+GG+ Q +L+RG EIV TPGR+ID
Sbjct: 407 MIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPGRMID 466
Query: 436 FLEKG---TTNLQRCTYLVLDEADRM 504
L G TNL+R TY+VLDEADRM
Sbjct: 467 ILTTGGGKITNLRRVTYIVLDEADRM 492
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGFEPQI +I+ +RPDRQT+M+SAT+P ++ LA L + ++I IG + N +I Q
Sbjct: 495 MGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALENPVEIQIGGKSV-VNSDIDQ 553
Query: 690 IVDI 701
+V+I
Sbjct: 554 VVEI 557
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKTLAYILP + HIN Q P++ GDGPI
Sbjct: 375 KTGSGKTLAYILPMLRHINAQEPLKNGDGPI 405
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G +V PI+ + A + + ++ G+++P PIQAQ P+ MSG++ +G+
Sbjct: 322 GKKVPKPIKTWAHAGLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGI 373
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++++PTRELA QI A F SY++ V+GG R Q + RG +VIATPGRL+D
Sbjct: 322 VIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLD 381
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+++ + ++VLDEADRML
Sbjct: 382 FVDRTFITFEDTRFVVLDEADRML 405
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/50 (42%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGF +R+I+ + RP+ QTLM+SAT+P+E++++A ++L +Y+ + IG
Sbjct: 407 MGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIG 456
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+
Sbjct: 237 GSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLM 286
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q++ A + +R+ VFGG R Q + L+ GV+I++ATPGRL+D
Sbjct: 100 LVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLD 159
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ + LVLDEADRML
Sbjct: 160 LINQKMIRFDNLKVLVLDEADRML 183
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF I+K+IE + +RQ +M+SAT+ +KKLA L D ++I S+Q A I
Sbjct: 185 MGFIRDIKKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIK-ASVQNQAAPTIEH 243
Query: 690 IVDIC 704
+V C
Sbjct: 244 LVHPC 248
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q+++ +G + + GG Q R LERG +++IATPGRL+D
Sbjct: 81 LILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGRLLD 140
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
E+GT L LV+DEADRML
Sbjct: 141 HFERGTLLLMGVEILVIDEADRML 164
Score = 35.9 bits (79), Expect = 0.97
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF P I +I + RQTL +SAT E+ KL E +L + + I
Sbjct: 166 MGFIPDIERICKLTPFTRQTLFFSATMAPEIIKLTEQFLHSPVCVEI 212
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
P+ F+ V + V+ GY PTPIQ++ P + K+++G+ +
Sbjct: 4 PLNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQ 51
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELA QIQ+ A F + ++ ++GG R +++ +++ TPGRL D
Sbjct: 435 LVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKD 494
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL K +L YL+LDEADRML
Sbjct: 495 FLGKRKISLANLKYLILDEADRML 518
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 659
MGF P+I+ II + DR TLM+SAT+P E++ LA ++L +Y+ + IG +
Sbjct: 520 MGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKV 573
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++APTRELA QI F + C GGA Q DL+RG EIV+ TPGR+ID
Sbjct: 581 IIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMID 640
Query: 436 FLEKGT---TNLQRCTYLVLDEADRM 504
L TNL+R TY+V+DEADRM
Sbjct: 641 VLTTSNGKITNLRRVTYVVIDEADRM 666
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFEPQI KII+ IRPDRQ +M+SAT+PK V++LA+ L I+ +G + A NI Q
Sbjct: 669 LGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAKRVLRKPIECIVGG-RGQAGGNIEQ 727
Query: 690 IVD 698
I++
Sbjct: 728 IIE 730
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 140 KEFSWRTRTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
++F TGSGKTLAY+LP + H+ +QP ++ GDGPI
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPI 579
Score = 35.9 bits (79), Expect = 0.97
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
G +V PIQ + + D V ++ + P PIQAQ P MSG++ +G+ E
Sbjct: 495 GKDVPKPIQNWYQCGLNDRVLNVLIEKKKFINPFPIQAQAVPCIMSGRDFIGIAE 549
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA QI A FG +R ++GG +Q L +G ++VIATPGRLID
Sbjct: 88 LILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGRLID 147
Query: 436 FLEK-GTTNLQRCTYLVLDEADRM 504
+L++ +L+ C VLDEADRM
Sbjct: 148 YLKQHEVVSLRVCEICVLDEADRM 171
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLI 432
L+LAPTRELA QIQ F C+ G E A L G EI++ATPGRL+
Sbjct: 337 LILAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLV 396
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D LE+ L +C+Y+VLDEADRM+
Sbjct: 397 DCLERHLLVLSQCSYVVLDEADRMV 421
Score = 54.4 bits (125), Expect = 3e-06
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+G+
Sbjct: 249 GNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGI 300
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 561 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 659
RQT+M+SAT P V+++A++YL + IG++
Sbjct: 465 RQTVMYSATMPPSVERIAKNYLKHPAMVTIGTI 497
Score = 32.7 bits (71), Expect = 9.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 158 TRTGSGKTLAYILPAIVHINNQPPI 232
++TGSGKT A++LP + +I PP+
Sbjct: 301 SKTGSGKTAAFVLPMLSYIEPLPPL 325
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTREL QI + A H+ +R+ + GG + Q +DLE I++ATPGRLI
Sbjct: 74 LVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLI 133
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D ++ G+ ++ + VLDEADRML
Sbjct: 134 DMIKSGSIDISNVEFFVLDEADRML 158
Score = 37.1 bits (82), Expect = 0.42
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF IR ++ + + +QTL++SAT EV +LA +L + ++I I
Sbjct: 160 MGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVEIQI 206
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
FEE + + ++ +GY E TPIQ + P + GK++ G+ +
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQ 46
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/96 (41%), Positives = 54/96 (56%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + G + V+ ++GG Q R L GV++VI TPGR++D
Sbjct: 78 LVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILD 137
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSL 543
L + T +L + +VLDEAD ML EK L
Sbjct: 138 HLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKIL 173
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLS 668
MGF I KI++ +RQTL++SAT P E+++LA Y+ D I I++ QL+
Sbjct: 163 MGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLT 215
Score = 38.3 bits (85), Expect = 0.18
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
F + + V + + MG++EP+PIQAQ P + GK+++G
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIG 48
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
LVL PTRELA Q+ Q + +R+ ++GGA Q + L +G +IV+ATPGRL
Sbjct: 77 LVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGCDIVVATPGRL 136
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+D + K +L+ LVLDEADRML
Sbjct: 137 LDLMRKNALDLRGLKALVLDEADRML 162
Score = 40.3 bits (90), Expect = 0.045
Identities = 17/47 (36%), Positives = 34/47 (72%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF ++ I++Q + QTL++SAT+P +VK+L E+ L + ++I++
Sbjct: 164 LGFADELDDILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEISV 210
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F D+ + ++GYKEPT IQ + P + G +L+ E
Sbjct: 3 FVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAE 46
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CLVL+PTRELA QI + D+G + +FGG Q + L GV++V+ATPGRL+
Sbjct: 141 CLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLM 200
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L + + +L VLDEAD+ML
Sbjct: 201 DHLGEKSAHLNGVEIFVLDEADQML 225
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +3
Query: 438 LGKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
LG+ L V IF + +GF IRKI Q+ +RQ L +SAT P E+ KLA
Sbjct: 203 LGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAG 262
Query: 618 DYLGDYIQINI 650
+ L + Q+ I
Sbjct: 263 ELLKNPAQVAI 273
Score = 39.9 bits (89), Expect = 0.060
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
E H+ Q F + + + + GY PTPIQAQ P+ MSG++L+G+ +
Sbjct: 60 ETHSLTQ-FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQ 110
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/87 (42%), Positives = 55/87 (63%)
Frame = +1
Query: 247 SDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 426
+ LVL PTRELA Q+ + +G + ++GG +Q R L+RGV++V+ATPGR
Sbjct: 108 ASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGR 167
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRML 507
+D L++ T L++ +VLDEAD ML
Sbjct: 168 ALDHLQRKTLKLEQVRVVVLDEADEML 194
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
FE + + + +GY+EPTPIQ P + GK+L+G+
Sbjct: 38 FESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGI 79
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF + I+ RQT ++SAT P + +AE +L + +++ I
Sbjct: 196 MGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRI 242
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTREL QI A D+G + ++ + GG + L RG +I+IATPGRL+D
Sbjct: 79 LVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLD 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ NL LVLDEAD+ML
Sbjct: 139 LIDQKAFNLGSVEVLVLDEADQML 162
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF +R+I + + +RQTL +SAT PK +K+L Y + +Q+++
Sbjct: 164 LGFVHALRRISQLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSV 210
Score = 35.9 bits (79), Expect = 0.97
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F + V Q + GY PTPIQ Q P + G++L+G+ +
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQ 47
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA QI Q + +R+T +FGG +Q DL G EIV+AT GRL+D
Sbjct: 109 LVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLD 168
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+++ +L + +VLDEADRML
Sbjct: 169 HVKQKNISLNKVEIVVLDEADRML 192
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF IRKI++ + RQTL++SAT+ ++KLA+D++ + + + Q + N N+ Q
Sbjct: 194 MGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QNTTNANVEQ 252
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/101 (38%), Positives = 59/101 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++L+PTRELA Q +V DF + +R + GG +Q DL R +I+IATPGRL+
Sbjct: 304 VILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMH 363
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQ 558
L + +L + Y+V DEADR+ N + + LSK ++
Sbjct: 364 HLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSE 404
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWP 593
MGF Q+ +I+ ++ +RQTL++SAT P
Sbjct: 389 MGFNEQLTEILSKLSENRQTLLFSATLP 416
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++++PTREL QI Q F S ++ +GG Q L G I++ATPGRL+D
Sbjct: 277 VIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLD 336
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+EKG +LVLDEADRML
Sbjct: 337 FVEKGRVKFSSVQFLVLDEADRML 360
Score = 65.7 bits (153), Expect = 1e-09
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKR 182
G V PI+ FE A + V +K GYK+PTP+Q PI M+G++L+ + K
Sbjct: 188 GDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKT 247
Query: 183 WPTSCQPLCT*ITNRLFGEVMVRLFGLGAYQRVSTTNSAS------CCRFWTHILCS*HV 344
P+ + R V+ + VS T + +F + + V
Sbjct: 248 -AAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVV 306
Query: 345 CVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFEP 524
S L G + F+ KG + ++V + MGF P
Sbjct: 307 AYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLP 366
Query: 525 QIRKII--EQIRP--DRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
I K++ E + P +RQTLM+SAT+P EV+ LA +L +Y+ + +G
Sbjct: 367 SIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVG 413
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 77.0 bits (181), Expect = 4e-13
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 414
+++ P+RELA+Q +V F G S N C+ GG+ +EQ+ ++RGV +V+A
Sbjct: 127 MIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVA 185
Query: 415 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSE-KSLSKYAQTDR 567
TPGRL+D L+K L C YLVLDEADRM+ D+ + + +++ Y ++ R
Sbjct: 186 TPGRLMDLLDKRIITLDVCRYLVLDEADRMI--DMGFEEDVRTIFSYFKSQR 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G ++ P++ F+E FP + +K G PTPIQ QG P ++G++++G+
Sbjct: 39 GDDIPPPVKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGI 90
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/65 (33%), Positives = 40/65 (61%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 683
+ MGFE +R I + RQTL++SAT PK+++ A+ L + +N+G +A+ ++
Sbjct: 216 IDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDV 274
Query: 684 LQIVD 698
+Q V+
Sbjct: 275 IQEVE 279
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/97 (41%), Positives = 55/97 (56%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++ PTREL Q+ + G V+ V+GG Q L RGV +++ATPGRLID
Sbjct: 75 LIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLID 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+E+GT +L + +VLDEAD ML E+ LS
Sbjct: 135 HIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILS 171
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
+ MGF I +I+ + RQT+++SAT K + ++A Y+
Sbjct: 158 LNMGFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYM 198
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
CL+L PTRELA QI + + +++ +FGG + Q R L+ GV+I+IATPGRL+
Sbjct: 80 CLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLM 139
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + L R VLDEADRML
Sbjct: 140 DLHGQKHLKLDRVEIFVLDEADRML 164
Score = 36.3 bits (80), Expect = 0.73
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 441 GKGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAED 620
G+ H +L V IF + MGF I+KI+ + R L +SAT P E++ LA
Sbjct: 143 GQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLANR 202
Query: 621 YL 626
L
Sbjct: 203 IL 204
Score = 34.3 bits (75), Expect = 3.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 60 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
+Q +K GY+ PTPIQ P+ + G +L+G+ +
Sbjct: 15 LQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQ 49
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SDCLVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 423
+ L+L+PTREL QI ++ + + V+GGA EQARD++RG +I++ATPG
Sbjct: 72 TQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGAQIIVATPG 131
Query: 424 RLIDFLEKGTTNLQRCTYLVLDEADRML 507
R+ D + + ++ + Y +LDEAD ML
Sbjct: 132 RMQDMINRRLVDISQINYCILDEADEML 159
Score = 37.9 bits (84), Expect = 0.24
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 656
+ MGF I I+ ++ T ++SAT P EV ++ + ++ D I+I +G+
Sbjct: 159 LNMGFYEDIVNILSTTPDEKNTWLFSATMPAEVARIGKQFMTDPIEITVGA 209
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/98 (40%), Positives = 53/98 (54%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q++ A H + V+GG P R Q L+R IV+ TPGR+ID
Sbjct: 78 LILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVID 137
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
+ + L+ +VLDEADRML EK L +
Sbjct: 138 LMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRR 175
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 671
+GF P I KI+ + +RQTL+ SAT P ++KLA+ Y+ + +++ +SA
Sbjct: 163 IGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISA 216
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QI Q A D+ + + GG Q R+L+R +IV+ATPGRL+D
Sbjct: 76 LVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKRNWDIVVATPGRLLD 135
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ + L + +++DEADRML
Sbjct: 136 HVRRNNLTLANTSLVIIDEADRML 159
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANH 677
MGF P I I+ Q+ RQ+L++SAT P +++LA + D + + + + ++H
Sbjct: 161 MGFLPDINTIVRQLPKGRQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDH 216
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
FE + + + +G+ PTPIQ Q P + G++L+G+ +
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQ 46
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+ PTRELA QI + + S +R+T VFGG Q L +GV+I++ATPGRLID
Sbjct: 79 LVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLID 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+G +L + VLDEAD ML
Sbjct: 139 LQMQGNIDLSQLEIFVLDEADLML 162
Score = 34.3 bits (75), Expect = 3.0
Identities = 23/84 (27%), Positives = 48/84 (57%)
Frame = +3
Query: 444 KGHNQLTAVHIFSS**G*SYVGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDY 623
+G+ L+ + IF + MGF I+KI + +QTL++SAT P+++ +L++
Sbjct: 142 QGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLFSATIPEKIDELSKSI 201
Query: 624 LGDYIQINIGSLQLSANHNILQIV 695
+ + +++I + +A NI Q++
Sbjct: 202 VKNATKVDINPEETTAK-NIGQLL 224
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/94 (41%), Positives = 54/94 (57%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTREL QI + F S+++ + GG Q + ERG ++++ATPGRLID
Sbjct: 148 LILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLID 207
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEK 537
L++ L +LVLDEAD+ML H K
Sbjct: 208 LLDRKALRLSETRFLVLDEADQMLDLGFIHALRK 241
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
+GF +RKI + +RQT+++SAT PK++++L+ YL D ++ +
Sbjct: 233 LGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Rep:
DEAD-box helicase 5 - Plasmodium falciparum
Length = 755
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTREL++Q++ + ++GG Q L +G++I+ TPGR+ID
Sbjct: 261 LVLEPTRELSKQVENTFKEISQFYNFNIMSIYGGESYTYQENKLRKGIDILTGTPGRIID 320
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+EK +LQ Y+VLDEAD ML H E+ LS
Sbjct: 321 HIEKKNLSLQNIKYVVLDEADEMLNLGFTHDIERILS 357
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = +1
Query: 247 SDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 426
+ L+LAPTRELA Q+ + + + V+GG Q R+L RGV+IV+ TPGR
Sbjct: 72 TQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQIVVGTPGR 131
Query: 427 LIDFLEKGTTNLQRCTYLVLDEADRML 507
++D + + T L+ +Y+VLDEAD ML
Sbjct: 132 ILDHISRRTIKLENVSYVVLDEADEML 158
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLS 668
+ MGF + +I++ + +++ L++SAT P + KLA++Y+ +Y I + QL+
Sbjct: 158 LNMGFIDDVEEILKSVSTEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLT 212
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+V++PTRELA QI + F +R +C GG+ E +++G E+VI TPGR+ID
Sbjct: 480 VVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMID 539
Query: 436 FLEKG---TTNLQRCTYLVLDEADRM 504
L TN++R TY+V+DEADRM
Sbjct: 540 LLTANNGRVTNVRRTTYIVMDEADRM 565
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 671
MGFEPQ+ KII +RP Q +++SAT+PK ++ LA L ++I +G + A
Sbjct: 568 MGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVA 621
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +2
Query: 161 RTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
+TGSGKT+A++LP + H+ +Q P+ +GPI
Sbjct: 448 KTGSGKTVAFLLPMLRHVRDQRPVSGSEGPI 478
Score = 37.5 bits (83), Expect = 0.32
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + P++ + P +K G++ PT IQAQ P MSG++++G+
Sbjct: 395 GQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGI 446
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 76.2 bits (179), Expect = 7e-13
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA Q+ + + + S R V+GG +Q L+RGV +++ TPGR+I
Sbjct: 87 LVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVI 146
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
D LE+GT +L LVLDEAD ML E+ L K
Sbjct: 147 DHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRK 185
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 671
MGF + +++ ++ RQ ++SAT P +++++A+ YL D I++ I + +A
Sbjct: 173 MGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTA 226
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 GVEVHNPIQ---YFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVP 173
GV + NP F + D V Q V +GY+ P+PIQA P ++G++++G +
Sbjct: 4 GVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGT 63
Query: 174 AKRWPTSCQPLCT*ITNRLFGEVMV 248
K + L + N++ +V+V
Sbjct: 64 GKTAAFALPLLTRTVLNQVKPQVLV 88
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 76.2 bits (179), Expect = 7e-13
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQ-VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVL PTRELA Q+ + A H VR V+GG P QA L RG ++V+ TPGR++
Sbjct: 77 LVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRIL 136
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
D + +GT L VLDEAD ML E+ LS+
Sbjct: 137 DHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSE 175
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELAQQ+ A + V+GG+ + Q L RG +V+ TPGRL+D
Sbjct: 127 LVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGTPGRLLD 186
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ +G+ L + LVLDEAD ML
Sbjct: 187 LIRQGSLKLDQLKTLVLDEADEML 210
Score = 37.5 bits (83), Expect = 0.32
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 665
+ MGF I I+ Q DRQT+++SAT V +A YL I+I Q+
Sbjct: 210 LSMGFIDDIETILSQTPKDRQTMLFSATLSSRVMSIANRYLHSPESISISPKQM 263
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
P F + N + + +G+ +PTPIQ + P+ ++G +L+G
Sbjct: 53 PAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIG 97
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/98 (39%), Positives = 55/98 (56%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + + ++ ++GG Q R L R EI++ TPGRL+D
Sbjct: 75 LVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMD 134
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
+ +GT +L Y+VLDEAD ML +K LS+
Sbjct: 135 HMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQ 172
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
MGF P I+KI+ Q +RQT ++SAT P EV++L ++
Sbjct: 160 MGFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFM 198
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 66 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
Q + G+++PTPIQ + PIAM+G +L+G
Sbjct: 17 QMIDEKGFEKPTPIQVKSIPIAMAGLDLMG 46
>UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|Rep:
DEAD-box RNA helicase - Athelges takanoshimensis
Length = 124
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL P+RELA QI + ++ +++T VFGG Q + L +GV+I++ATPGRL+D
Sbjct: 36 LVLTPSRELAAQILENVKEYSTHLDIKSTVVFGGVKASGQIKTLRQGVDILVATPGRLLD 95
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ + R L+LDEADRML
Sbjct: 96 LHSQKAVSFNRIDVLILDEADRML 119
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VLAPTREL QQ +V + VR +GGAP+ QAR L G ++++A PGRL D
Sbjct: 191 VVLAPTRELVQQTAKVFHQLS-SGKVRVCEAYGGAPREAQARRLHNGCDVLVACPGRLKD 249
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
FL+ G ++LV DEADR+L
Sbjct: 250 FLQNGDVIFDEVSFLVFDEADRLL 273
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDR--QTLMWSATWPKEVKKLAEDYLGD---YIQINIGSLQLSAN 674
MGF+ Q+ I+ R QT+MWSATWP V++LA++YL I+ L N
Sbjct: 275 MGFKVQLDDILGYFSSHRPAQTMMWSATWPPVVEQLAQEYLSQNRYVIRSGTAGTGLQVN 334
Query: 675 HNILQ 689
NI Q
Sbjct: 335 ENIKQ 339
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 NPIQYFEEA-NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
NP++ F + N PD++ +G+++ G+ TPIQ+ P+ G +++G+
Sbjct: 114 NPVKLFSDLDNLPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGL 161
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 76.2 bits (179), Expect = 7e-13
Identities = 40/104 (38%), Positives = 55/104 (52%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTREL QQ+ ++ V GG P Q L G ++V+ATPGRL+D
Sbjct: 117 LILTPTRELMQQVFMNVSEMLDVIRCPGNPVCGGVPVSTQTIALREGADVVVATPGRLLD 176
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
++G L + TYLV+DEADRML + + K + T R
Sbjct: 177 LCKRGALCLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSR 220
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPERVPAKR 182
G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+ E K
Sbjct: 32 GEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKT 91
Query: 183 WPTSCQPLC 209
S PLC
Sbjct: 92 LAYSL-PLC 99
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
+GMG E Q+RKI+ RQTL+WSAT P+ +++LA + + I I +G
Sbjct: 200 LGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVG 252
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKTLAY LP + + + P GD P+
Sbjct: 86 TGSGKTLAYSLPLCMLLRTKAPSNPGDTPV 115
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 76.2 bits (179), Expect = 7e-13
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++L PTREL++Q++ A + +R V+GG+ Q L+RGVEI++ TPGR+ID
Sbjct: 746 IILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIID 805
Query: 436 FLEKG---TTNLQRCTYLVLDEADRMLVWDLNHKSE 534
L TNL R +++VLDEADR+L DL +S+
Sbjct: 806 ILTISNCKVTNLNRVSFVVLDEADRLL--DLGFESQ 839
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
+GFE QI I+ R D+QT M SAT+P ++ LA+ L I+I +G + N+NI Q
Sbjct: 834 LGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVGE-KGKTNNNIYQ 892
Query: 690 IVDI 701
V++
Sbjct: 893 FVEV 896
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
TGSGKTL+Y+ P I H+ +QPP+R DGPI
Sbjct: 715 TGSGKTLSYLFPLIRHVLHQPPLRNNDGPI 744
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+LAPTRELA Q+ + +F V+ VFGG P Q + L++G +IV+ TPGR+ID
Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVID 132
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
L + T L+LDEAD M+
Sbjct: 133 HLNRRTLKTDGIHTLILDEADEMM 156
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
+Q F+E D Q +++MG+KEPTPIQ P A+ G +++G
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILG 44
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRP-DRQTLMWSATWPKEVKKLAEDYL 626
+ MGF +R I+++I RQT+++SAT PK ++ L + ++
Sbjct: 156 MNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFM 197
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELAQQI+ F + + GG EQ L G EI+IATPGRL D
Sbjct: 395 LIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKD 454
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
++K + +C Y+V+DEADRM+
Sbjct: 455 MVDKSILVMSQCRYVVMDEADRMV 478
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+GV
Sbjct: 307 GGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGV 358
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELAQQ+ + H S V+ ++GG+ Q R L++G + V+ TPGR++
Sbjct: 78 LVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPGRVM 137
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + +GT L+ +VLDEAD ML
Sbjct: 138 DHIRRGTLKLEGIRAVVLDEADEML 162
Score = 41.1 bits (92), Expect = 0.026
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 689
MGF + +++Q+ RQ ++SAT PK++K +AE +L + +I I S + + N +I Q
Sbjct: 164 MGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKS-KTATNESIEQ 222
Score = 35.1 bits (77), Expect = 1.7
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
F P + + ++ GY++P+PIQ Q P + GK+++G+ +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQ 51
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LV+APTRELA Q++ +++ +G V +CV GG R++ R LERG IV+ATPGRL
Sbjct: 80 LVIAPTRELALQVKRELSWLYGDAGAVLASCV-GGMDMRDERRALERGAHIVVATPGRLR 138
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D + +G+ +L +VLDEAD ML
Sbjct: 139 DHITRGSIDLSGVAAVVLDEADEML 163
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQIN 647
+GF + I+E+ DRQTL++SAT K + LA+ Y D +I+
Sbjct: 165 LGFREDLEFILEETPEDRQTLLFSATVSKPIAALAQTYQNDAQRIS 210
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ G + +R + V GG P Q L+RG++++IATPGRL+D
Sbjct: 223 LVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVD 282
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
+++ +L VLDEAD M
Sbjct: 283 LIDRDAVSLAEVDVAVLDEADHM 305
Score = 36.3 bits (80), Expect = 0.73
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 632
+GF P +R I+E +P Q + +SAT + V+ L D+L D
Sbjct: 308 LGFLPNVRAILEGTKPGGQRMFFSATLDRGVEALVTDFLTD 348
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 83 GLQRTDAHSSSRLADSYVWKEFSWRTRTGSGKTLAYILPAIVHINNQ 223
G+ A S L D ++ R RTGSGKTL + LP + + Q
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQ 211
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELA QI G + +R ++GG +Q R L GV++V+A PGRL+D
Sbjct: 74 LVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLD 133
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
+ +GT ++ L++DEADRM
Sbjct: 134 HIWRGTIDVCGVETLIIDEADRM 156
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
FE NF V GV+ GYKEPTPIQAQ P M+G +++G+ +
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQ 46
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG--SLQLSANHNI 683
MGF+P I+ I++ + QTL++SAT P EV+KL + + + + +G S S +H++
Sbjct: 159 MGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSHSV 218
Query: 684 LQI 692
+
Sbjct: 219 YPV 221
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 75.8 bits (178), Expect = 1e-12
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++ PTRELA Q A + S +R V+GG +Q R + G +I+ ATPGRL+
Sbjct: 216 VIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLH 275
Query: 436 FLEK-GTTNLQRCTYLVLDEADRMLV--WDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*R 606
F++K NLQR Y+V+DEAD ML W+ + K S AQ + PKK R
Sbjct: 276 FMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKIMSAGGAAQEIKYLLFSATFPKKIR 335
Query: 607 NLLR 618
+L R
Sbjct: 336 DLAR 339
Score = 35.9 bits (79), Expect = 0.97
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPE 164
P FE+A + + V GYK PTPIQA P G +++G+ +
Sbjct: 120 PALRFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAIHKGHDVIGIAQ 167
Score = 35.9 bits (79), Expect = 0.97
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 570 LMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIV 695
L++SAT+PK+++ LA ++L D++Q+ +G S + NI+Q V
Sbjct: 324 LLFSATFPKKIRDLAREHLSEDHVQLRVGRAG-STHSNIIQTV 365
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGRL 429
++++PTRELA Q + + C+FGG+ K EQ L + GV+I+ ATPGRL
Sbjct: 261 VIVSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRL 320
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
DFL +G+ +L ++ VLDEADRML
Sbjct: 321 KDFLSEGSISLANVSFAVLDEADRML 346
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRP--DRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
GF I+ I+ P RQTLM++ATWP +++KLAE Y+ + Q+ IG
Sbjct: 349 GFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYMINPAQVTIG 397
Score = 38.3 bits (85), Expect = 0.18
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 87 YKEPTPIQAQGWPIAMSGKNLVGVPE 164
Y PTPIQ+ WP ++SG++++G+ E
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGIAE 224
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVLAPTRELA+QI + A F + + + V GG Q LE+ +I++ATPGRL+D
Sbjct: 79 LVLAPTRELAEQIHEQAKQFEAKTGLTSVVVTGGINYGSQLSVLEKTHDILVATPGRLMD 138
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE NL+ +L++DEADRML
Sbjct: 139 LLEAEQYNLEGIEWLIIDEADRML 162
Score = 32.7 bits (71), Expect = 9.0
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 164 TGSGKTLAYILPAIVHINNQPPIRRGDGP 250
TG+GKTLA++LPA+ H+ + P R+ GP
Sbjct: 49 TGTGKTLAFLLPALQHLLDFP--RQQPGP 75
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA Q V G ++ + GG + +Q + + GV+I++AT GRL+D
Sbjct: 94 LILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGVDIIVATHGRLLD 153
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKY 552
+ + L+ TYLVLDEADR+L D + S +L+ Y
Sbjct: 154 LVMQADLVLEHLTYLVLDEADRLLDEDFS-ASMTALTPY 191
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
LVLAPTRELA Q+ + GH +++ V+GG R Q L RGV++V+ TPGR+
Sbjct: 143 LVLAPTRELAMQVADSFKAYAAGHP-HLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRV 201
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+D + +GT + T LVLDEAD ML
Sbjct: 202 MDHMRQGTLDTSGLTSLVLDEADEML 227
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF + I+EQ+ +RQ +++SAT P E+++L++ YL D ++ I
Sbjct: 229 MGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTI 275
Score = 33.5 bits (73), Expect = 5.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
P F+ F + + + + GY +P+PIQ +P M G++LVG
Sbjct: 69 PQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVG 113
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELA Q+ + R V+GG EQ R+LE+G EI++ T GR+ID
Sbjct: 119 LVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGTTGRVID 178
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+E+G+ L Y +LDEAD ML
Sbjct: 179 HIERGSLELSYLRYFILDEADEML 202
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 635
+ MGF I I D + LM+SAT P+++ +A ++G Y
Sbjct: 202 LNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIASTFMGSY 245
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELAQQ+ +G + + GG REQ L RG ++++ TPGR+I
Sbjct: 81 LVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQVIVGTPGRVI 140
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L++G+ L LVLDEAD ML
Sbjct: 141 DHLDRGSLKLDGLNALVLDEADEML 165
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 650
MGF +++++ D Q + +SAT P E+ ++ YL D ++I I
Sbjct: 167 MGFIDDVKRVVSDTPKDAQRVFFSATLPDEISRIVNHYLVDPLRIAI 213
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
F E + P + ++T+GY+ P+ IQA+ P + G++++G
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLG 51
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
LVLAPTRELA Q+ +Q A + + C++GG Q R L++GV++V+ T GR++
Sbjct: 81 LVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVM 140
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D +EKGT L LVLDEAD ML
Sbjct: 141 DHIEKGTLQLDNLRALVLDEADEML 165
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 674
MGF ++ ++ + + Q L++SAT P ++ + E+YL + +I + + +AN
Sbjct: 167 MGFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTAN 221
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/101 (43%), Positives = 54/101 (53%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++ PTRELA Q+Q V V T ++GG Q R L GV+IV+ATPGR D
Sbjct: 164 VIFCPTRELAIQVQDVLCGISCGLVV--TALYGGVAYANQERVLRSGVDIVVATPGRAKD 221
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQ 558
FLEKGT + R LDEAD ML E LS+ A+
Sbjct: 222 FLEKGTLHFDRVVMACLDEADHMLDIGFKDDIELLLSQVAE 262
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+++APTRELA QI F H + ++ +GG + Q + + G +++ATPGRL+D
Sbjct: 253 VIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLD 312
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+++G + ++VLDEADRML
Sbjct: 313 FIDRGYVTFENVNFVVLDEADRML 336
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 510 MGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 653
MGF P I K++ + RQTLM+SAT+P E+++LA +L +YI + +G
Sbjct: 338 MGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVG 389
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 152
++ FE + + V V+ Y +PTPIQ PI ++G++L+
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
L++APTRELA Q+ +++ + +T+ TCV GG R++ R LERG IV+ TPGRL+
Sbjct: 79 LIIAPTRELALQVARELRWLYANTNAEIATCV-GGMDMRDERRALERGAHIVVGTPGRLV 137
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSL 543
D + +G+ + +VLDEAD ML DL + E L
Sbjct: 138 DHINRGSFDTSAIRAVVLDEADEML--DLGFREELEL 172
Score = 36.7 bits (81), Expect = 0.55
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 656
+GF ++ I+E +R+TLM+SAT PK + LA Y + ++I S
Sbjct: 164 LGFREELELILEDTPKERRTLMFSATVPKGIAALATRYQKNGLRITTDS 212
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
+V+ PTRELA+Q+ ++ + + ++ ++GG P R QA L +G I+I TPGR+
Sbjct: 75 IVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPGRIQ 134
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
D L KGT L+ LVLDEADRML
Sbjct: 135 DHLAKGTLTLESIKTLVLDEADRML 159
Score = 40.3 bits (90), Expect = 0.045
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 686
MGF +I KI + +QTL++SAT+P +++ LA+ L D + I + ++Q + N L
Sbjct: 161 MGFYEEIIKIGSNMPKQKQTLLFSATFPPKIESLAKALLKDPLTIKVDTVQEAMKINEL 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,443,381
Number of Sequences: 1657284
Number of extensions: 17037596
Number of successful extensions: 46560
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 42095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45784
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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