Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00154
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    25   2.7  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   6.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   6.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 365 PTSHRQNFIALRDQLAALLVNKLKCRP 445
           P SH++     R+ +AA L  K KCRP
Sbjct: 102 PMSHQETMTLWRE-VAAALDGKAKCRP 127



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 274 RGRRCTRCPRAGQCAALW*GKRRAAR 197
           R R+C RC   G  AA   GK R+++
Sbjct: 210 RRRQCYRCYEYGHTAARCHGKDRSSK 235


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 94  AASMIVLQLQSNPARRPSVDKLLQH 168
           A  +++  L  NP  RP++ ++L H
Sbjct: 230 AKDLVLKMLAPNPISRPTITEVLDH 254


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = -1

Query: 181 MRRIHAAEVCPRTDDAQGSIATAVQSWTPPVCEATTESCIRTV*SFCMYP*GWTSQT 11
           ++R H+A++  R D    +  TAV  ++P    A   +         MY    T+ T
Sbjct: 679 IKRSHSAQLPQREDARSRTPLTAVSDYSPATAAAAAAAAAAKERELLMYETSSTTTT 735


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 257 QMPSSWSVRGAVVRQETGSPAGK 189
           + P+ W ++  V+ Q+ G P G+
Sbjct: 484 EFPAHWKIQRLVLLQKPGKPPGE 506


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 915,607
Number of Sequences: 2352
Number of extensions: 20176
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)