Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00153
(586 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 39 0.003
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 36 0.032
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 36 0.032
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 33 0.13
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 33 0.23
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 33 0.23
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 32 0.40
SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12) 31 0.52
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19) 30 1.6
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16) 29 2.1
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 29 2.8
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_34306| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.7
SB_2072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18) 28 4.9
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 28 6.4
SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 28 6.4
SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_55357| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_52097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_22475| Best HMM Match : Peptidase_A17 (HMM E-Value=3e-11) 27 8.5
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 27 8.5
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
V+DGSPAE AG+++GD IL+VNG+++ G H
Sbjct: 2688 VEDGSPAERAGVRKGDFILQVNGNAVKGLPH 2718
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 147 VIGKVDDGSPAETAGLKRGDRILEVN 224
V+ +VD+ S AE AGL++GDRIL +N
Sbjct: 2582 VVSQVDEWSIAERAGLQKGDRILRLN 2607
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
+ VD GSPA A LK GD ILE+NG ++ +TH
Sbjct: 486 VRSVDKGSPAAQARLKPGDHILEINGLNVRNKTH 519
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
VD GSPA A LK GD ILE+NG ++ +TH
Sbjct: 321 VDKGSPAAQARLKPGDHILEINGLNVRNKTH 351
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +3
Query: 147 VIGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKKW*LASRSDLMTP 293
VI V D S AE AGL+ GD+ILE+NG ++ T + L +R P
Sbjct: 23 VIISVQDNSIAERAGLQAGDQILELNGENVQALTKDQIVLLARRSTRVP 71
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSI 236
+ V+ SPA T G++ GD +L+VNG S+
Sbjct: 104 VHNVEPKSPAFTVGMRTGDLVLKVNGVSV 132
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
I + GSPAE A L+ GD ILEVNG S+ +H
Sbjct: 70 IDSIAQGSPAERANLRIGDEILEVNGTSVENFSH 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 147 VIGKVDDGSPAETAGL-KRGDRILEVNGHSIAGET 248
+IG++ G AE +GL GD ILE+NG + G++
Sbjct: 469 LIGRIVKGGAAEKSGLLHEGDEILEINGVHMKGKS 503
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 189 GLKRGDRILEVNGHSIAGETHKK 257
GLKRGD++L VNG S+ GE H+K
Sbjct: 575 GLKRGDQLLSVNGVSVEGENHEK 597
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 171 SPAETAGLKRGDRILEVNGHSIAGETHKK 257
SPA AGLK GD+IL VNG S+ H++
Sbjct: 308 SPAHKAGLKPGDQILYVNGSSVERHPHEQ 336
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
I VD+ S A AGLK GD+I++VNG S +H
Sbjct: 1336 IAGVDEHSAASRAGLKCGDQIMDVNGTSFLNISH 1369
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
+ +D GS +E GL GD IL VN + G TH
Sbjct: 1271 VSSIDTGSVSEAIGLLPGDHILAVNDVNFDGLTH 1304
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 174 PAETAG-LKRGDRILEVNGHSIAGETHKK 257
PA+ G ++ GDRILEVNG S+ G THK+
Sbjct: 1291 PADRNGKIRIGDRILEVNGVSLVGVTHKQ 1319
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 150 IGKVDDGSPAETAG-LKRGDRILEVNGHSIAGETHKK 257
I + GS AE G L+ GD+IL+VNG + G +H +
Sbjct: 1937 IKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMSHAR 1973
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 150 IGKVDDGSPAETAG-LKRGDRILEVNGHSIAGETHK 254
+ V +GS A G LK GDRIL VNG S+ +H+
Sbjct: 998 VKSVTEGSVAFKDGRLKAGDRILAVNGTSLEQVSHE 1033
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 35.1 bits (77), Expect = 0.043
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETHKK 257
V DG+ A+ L+ GD +++VNG S+ +TH++
Sbjct: 474 VPDGAAAKDGKLRTGDALIKVNGRSVVNKTHQE 506
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 144 SVIGKVDDGSPAETAG-LKRGDRILEVNGHSIAGETH 251
S IG++ GSPA+ L GD+++ VNG SI G H
Sbjct: 917 STIGRIIQGSPADRCRELYVGDKLVAVNGTSIVGMHH 953
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 156 KVDDGSPAETAG-LKRGDRILEVNGHSIAGETH 251
K+ +G A+ G +K GD +LE+NG S H
Sbjct: 1300 KIAEGGVADLDGRIKVGDEVLEINGRSTQHMLH 1332
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKK 257
+ KV PA GLK GD+ILEVNG ++ TH +
Sbjct: 563 VTKVQPEGPA-AFGLKPGDKILEVNGINLRNTTHDR 597
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 150 IGKVDDGSPAETAG-LKRGDRILEVNGHSIAGETH 251
I + G+PAE G L+ GD++L+VN + G TH
Sbjct: 2316 IKDIQPGTPAEKCGHLRTGDQLLQVNDECLVGVTH 2350
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 168 GSPAETAGLKRGDRILEVNGHSIAGETHKK 257
G A+ +++GDR+L VNG S G TH++
Sbjct: 2541 GVAAKDGRIRKGDRVLSVNGRSTKGLTHQE 2570
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 153 GKVDDGSPAETAGLKRGDRILEVNG 227
GK D + + + GL+ GD ILEVNG
Sbjct: 46 GKSADQAQSVSGGLRPGDEILEVNG 70
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 171 SPAETAGLKRGDRILEVNGHSIAGETH 251
S + +GL+ GD +LEVNG + G T+
Sbjct: 2701 SASSRSGLEIGDEVLEVNGRHMRGMTN 2727
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKK 257
+ +V PA+ AGL GD+I+ VNG+ + T+ +
Sbjct: 189 VRQVAPNGPADKAGLSSGDQIVSVNGNQVLNRTYSQ 224
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 174 PAETAGLKRGDRILEVNGHSIAGETHKK 257
P++ GL+ GD I+ +NG SI G++H++
Sbjct: 549 PSQVGGLEPGDEIVGINGKSIKGKSHEE 576
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 150 IGKVDDGSPAETAG-LKRGDRILEVNGHSIAGETHKK 257
+ V GSP+ G L+RGD ++ +NG + TH++
Sbjct: 172 VRNVIPGSPSAEGGVLERGDEVVGINGVNTEDMTHQQ 208
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNG 227
I +VD S AE GL GD+I+EVNG
Sbjct: 157 ISQVDSDSQAEKQGLHLGDQIIEVNG 182
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETHKK 257
+++ S A LK GD+ILEV+GH + +H++
Sbjct: 1326 LENSSVARLGELKAGDQILEVDGHDLRNASHEE 1358
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVNGHSIAGETH 251
IG+V+ G A+ G+K D ILEV G + TH
Sbjct: 719 IGEVERGGEADRKGVKCKDFILEVEGEDVTTATH 752
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 201 GDRILEVNGHSIAGETH 251
GD +LEVNGH ++G TH
Sbjct: 167 GDELLEVNGHKLSGRTH 183
>SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12)
Length = 217
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAG 242
V SPA GL+ GD+IL+++G ++AG
Sbjct: 71 VHKDSPAALGGLRFGDQILQIDGENMAG 98
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETHKK 257
V DG A+ L+ GD+++ VNG S+ G + +K
Sbjct: 1013 VKDGPAAKDGRLQAGDQLIAVNGESLIGVSQEK 1045
>SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19)
Length = 129
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVN 224
+ V +G+PA GL+RGD+IL N
Sbjct: 57 VAGVREGNPAHRQGLRRGDKILMAN 81
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKRGDRILEVN 224
+ V +G+PA GL+RGD+IL N
Sbjct: 948 VAGVREGNPAHRQGLRRGDKILMAN 972
>SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16)
Length = 270
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 156 KVDDGSPAETAG-LKRGDRILEVNGHSIAGET 248
+V D +PA G L+ GD I+ VNG S+ G+T
Sbjct: 48 QVFDNTPASKDGTLQAGDEIVGVNGKSLRGKT 79
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 150 IGKVDDGSPAE-TAGLKRGDRILEVNGHSIAGETHKK 257
I + GS AE + L+ GD ILEVNG SI E+H K
Sbjct: 33 ISDIVKGSAAEGVSNLQPGDIILEVNGKSIE-ESHFK 68
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 356 PAPARPNRASGP-PEPVLSPAARRHQVAP 273
PAPAR ASGP P+P + P R P
Sbjct: 222 PAPARDRAASGPGPKPAVKPRDRLATAPP 250
>SB_34306| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 367
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 563 DAHCTLITHHHSFFTMSN*PKVH--RHFLRVELLLGGEMCSHLG 438
+ H HH S T+ + ++ RH+L +E + GG++ H G
Sbjct: 57 EGHIVASLHHPSIITIYDIDQLADGRHYLTMEFVPGGDLAQHKG 100
>SB_2072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3
Query: 336 IWTCRCRKRPLRLANPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSV* 515
+W C P+ + P DSP PP L R +A K +PK+ + +
Sbjct: 289 LWQYECSDDPVDIELPPDSPET--PPNLPQPPKRRSRRLQVATGLKLNPKRPELSRNTAE 346
Query: 516 H 518
H
Sbjct: 347 H 347
>SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)
Length = 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 162 DDGSPAETAGLKRGDRILEVNGHSIAGETH 251
+DG+ A+ L GD+ILEVN + TH
Sbjct: 61 EDGAAAKDGRLWAGDQILEVNNCDLREATH 90
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +3
Query: 354 RKRPLRLANPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSV*HREE 527
RKR LR P S P PPKL +++ E + KKK KK D R REE
Sbjct: 1156 RKRLLRKLKPNGSTLPELPPKLCIKLKVKEKK-----KKK---KKKGSDERETLMREE 1205
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 165 DGSPAETAG-LKRGDRILEVNGHSIAGETHKK 257
DGS A L+RGD+++ V G ++ G TH++
Sbjct: 125 DGSDAYRDNRLRRGDQLVTVAGETLVGVTHEQ 156
>SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 159 VDDGSPAETAGLKRGDRILEVNGHSIAGETHK 254
V++ PA AG++ GD I+ V + E H+
Sbjct: 425 VEEDGPAYMAGMRPGDIIVSVENRDVEEEDHR 456
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 192 LKRGDRILEVNGHSIAGETHKK 257
L+ GD +LE NG S+ G T+ K
Sbjct: 270 LQEGDHLLEANGESMVGVTNDK 291
>SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 150 IGKVDDGSPAETAGLKR-GDRILEVNGHSIAGET 248
I ++ G AE+ GL D +LEVNG ++G+T
Sbjct: 198 ISRLVPGGLAESTGLLAVNDEVLEVNGIDVSGKT 231
>SB_55357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 345 CRCRKRPLRLANPRDSPSPTEPP 413
C RK+ ++L P P PT+PP
Sbjct: 31 CVIRKKTIKLKEPLPLPMPTKPP 53
>SB_52097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -3
Query: 431 HLQVQLRRFGRRRT--VPGVR*AEGSFPAPARPNRASGPPE--PVLSPAARRHQVAP*CE 264
HL ++ ++ GR+R + G+ A G+ P + +G P P+LS R Q+AP C
Sbjct: 306 HLGLEKKKRGRKRRSELMGIPGANGA-PLIKKVMTDNGIPVAGPLLSSVVRPRQLAPACN 364
Query: 263 LPLLVGLAGDTMT 225
L +A MT
Sbjct: 365 LQQNGSVARPAMT 377
>SB_22475| Best HMM Match : Peptidase_A17 (HMM E-Value=3e-11)
Length = 646
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -3
Query: 521 TMSN*PKVHRHFLRVELLLGGEMCSHLGRGHLQVQLRRFGRRRTVPGVR*AEGSF 357
TM P LR+ ++ + S LG G + V L+RF RT+P + A +F
Sbjct: 12 TMKTSPSAWSVGLRLTIVSLFLVISVLGNGSILVLLKRFKSLRTIPNILIANLAF 66
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 171 SPAETAGLKRGDRILEVNGHSI 236
SPA+ AGL +GD ++ V+G I
Sbjct: 241 SPADLAGLHKGDVLIAVDGQKI 262
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 353 APARPNRASGPPEPVLSPAAR 291
AP P++A PP P SPA R
Sbjct: 116 APETPSQAPSPPPPPTSPATR 136
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,993,433
Number of Sequences: 59808
Number of extensions: 416072
Number of successful extensions: 1647
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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