Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00153
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.72 
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   5.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 349 RHVQIGHLVPRSRCYHQQLGVIRSLLDASY 260
           RH++  +  P   C H+ LG +  L D S+
Sbjct: 323 RHIKSPYHTPEPDCIHELLGHMPLLADPSF 352


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 532 TVSSRCQTDLRSIGTFLGSN 473
           TVSS   +D+ ++ T +G N
Sbjct: 126 TVSSEADSDVTTLPTLIGKN 145


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 532 TVSSRCQTDLRSIGTFLGSN 473
           TVSS   +D+ ++ T +G N
Sbjct: 174 TVSSEADSDVTTLPTLIGKN 193


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 532 TVSSRCQTDLRSIGTFLGSN 473
           TVSS   +D+ ++ T +G N
Sbjct: 174 TVSSEADSDVTTLPTLIGKN 193


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 532 TVSSRCQTDLRSIGTFLGSN 473
           TVSS   +D+ ++ T +G N
Sbjct: 174 TVSSEADSDVTTLPTLIGKN 193


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 355  RHRHVQIGHLVPRSRC 308
            RH + ++ H  P  RC
Sbjct: 1686 RHMYEELNHCAPNRRC 1701


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 192 NQRSLPESHRQP 157
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 192 NQRSLPESHRQP 157
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 192 NQRSLPESHRQP 157
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,882
Number of Sequences: 438
Number of extensions: 3677
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)