Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00151
(414 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 114 2e-26
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 4e-26
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 111 2e-25
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 93 1e-19
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 59 2e-09
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 44 5e-05
SB_23837| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.040
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.38
SB_655| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-20) 29 2.0
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 27 6.1
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 27 8.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 114 bits (275), Expect = 2e-26
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
K PA+GIDLGTTYSCVGV+QHG VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQV
Sbjct: 3 KTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQV 59
Score = 85.4 bits (202), Expect = 2e-17
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +3
Query: 255 ALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
A+NP TVFDAKRLIGRKFDDP + + M HWPF VI E +PKIQ+EFKGE K
Sbjct: 60 AMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKK 112
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 113 bits (273), Expect = 4e-26
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
K PAIGIDLGTTYSCVGV+QHG VEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQV
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQV 59
Score = 89.8 bits (213), Expect = 8e-19
Identities = 34/53 (64%), Positives = 46/53 (86%)
Frame = +3
Query: 255 ALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
A+NP T+FDAKRLIGR+FDDP ++ MKHW F+V+NE G+PK+++E+KGETK
Sbjct: 60 AMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETK 112
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 111 bits (268), Expect = 2e-25
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
K PAIGIDLGTTYSCVGV+Q+G VEIIANDQGNRTTPSYV FTDTERL+GDAAKNQV
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQV 59
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +3
Query: 255 ALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
ALNP T+FDAKRLIGR++DD +Q MK WPFK+I++ KPKIQ+E+KGE K
Sbjct: 60 ALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERK 112
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 92.7 bits (220), Expect = 1e-19
Identities = 44/54 (81%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQV 255
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQL 757
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3
Query: 261 NPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
NP TVFDAKRLIGR +DD +Q +K +PFKV+++ KP +Q++ K E K
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIK 810
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQ--HGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 252
K IGIDLGTTYSCVG +Q G ++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQ 87
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 258 LNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINE 368
+NP T++DAKR IG+ F ++ + K + F+V +
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTD 126
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 88 MPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 252
M +G D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 1 MSVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 NPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVIN-ECGKPKIQIEFKGE 407
N T+ KR IGRKF DP +Q+ + H P+KV+ IQ+++ G+
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGK 167
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 148 GNVEIIANDQGNRTTPSYVAFTDTERLI 231
GN IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_23837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 34.3 bits (75), Expect = 0.040
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 78 NIQNASYRNRFGNDILMCWSMAARERGDHRERPGQPYHTI 197
NI+ YR RFG + C+ + +R R G P+H +
Sbjct: 117 NIKPLLYRGRFGGTVFGCYFWRSMHHCKYRHRSGSPFHNV 156
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.38
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 157 EIIANDQGNRTTPSYVAFT-DTERL 228
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_655| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-20)
Length = 376
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 233 PMRRSVSVNATYDGVVRLPWSF-AMISTFPCCHTPTH-EYVVPKSIPIAGILNINHC 69
P+R ++ N Y GV+ L W F A+I++ +H EY + + IL ++ C
Sbjct: 153 PLRHRMTTNRMYSGVICLTWVFAALIASLATYIKTSHVEYDIYAAWMSVSILLVSLC 209
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 255 HLVLGCVADETLRVRERDVRWCGTVAL 175
HLV +A +T +RE + R C T+++
Sbjct: 260 HLVASTLASDTANIRELETRGCETISI 286
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 90 ASYRNRFG---NDILMCWSMAARERGDHRERPGQPYHTIVRR 206
ASYR G NDI + G HR+ G YH+I R
Sbjct: 1335 ASYRKSAGVSNNDITTRGIAPVNKVGSHRKTKGNKYHSISER 1376
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 280 STRRG*SGGNSTTPRFSRA*STGPSK*STNAANRKYRSSSKVRR 411
S R+ S S +PR R+ S + S + + R+YR SS RR
Sbjct: 274 SHRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRR 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,076,996
Number of Sequences: 59808
Number of extensions: 258275
Number of successful extensions: 640
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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