Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00151
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 110 4e-25
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 110 4e-25
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 99 6e-22
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 99 6e-22
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 99 6e-22
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 91 4e-19
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 90 7e-19
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 90 7e-19
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 60 6e-10
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 60 6e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 60 8e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 60 8e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 27 4.1
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 7.1
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 27 7.1
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 26 9.4
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 110 bits (264), Expect = 4e-25
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
K A+GIDLGTTYSCVGV+ HG VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 59
Score = 89.8 bits (213), Expect = 7e-19
Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 ALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVIN-ECGKPKIQIEFKGETK 413
A+NP+ TVFDAKRLIGRKFDDP +Q MKHWPFKVI+ E KPK+Q+E+KGE K
Sbjct: 60 AMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENK 113
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 110 bits (264), Expect = 4e-25
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
K A+GIDLGTTYSCVGV+ HG VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 59
Score = 89.8 bits (213), Expect = 7e-19
Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 ALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVIN-ECGKPKIQIEFKGETK 413
A+NP+ TVFDAKRLIGRKFDDP +Q MKHWPFKVI+ E KPK+Q+E+KGE K
Sbjct: 60 AMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENK 113
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 99 bits (238), Expect = 6e-22
Identities = 43/53 (81%), Positives = 51/53 (96%)
Frame = +1
Query: 94 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 252
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQ 58
Score = 72.9 bits (171), Expect = 8e-14
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +3
Query: 240 SQEPGALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+++ A NP TVFDAKRLIGR+FD+ +Q KHWPF V + GKP I++E KGE +
Sbjct: 55 AKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKR 112
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 99 bits (238), Expect = 6e-22
Identities = 43/53 (81%), Positives = 51/53 (96%)
Frame = +1
Query: 94 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 252
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQ 58
Score = 72.9 bits (171), Expect = 8e-14
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +3
Query: 240 SQEPGALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+++ A NP TVFDAKRLIGR+FD+ +Q KHWPF V + GKP I++E KGE +
Sbjct: 55 AKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKR 112
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 99 bits (238), Expect = 6e-22
Identities = 43/53 (81%), Positives = 51/53 (96%)
Frame = +1
Query: 94 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 252
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQ 58
Score = 73.7 bits (173), Expect = 5e-14
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = +3
Query: 240 SQEPGALNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+++ A NP TVFDAKRLIGR+FD+ +Q +KHWPF V + GKP +++E KGE +
Sbjct: 55 AKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKR 112
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 90.6 bits (215), Expect = 4e-19
Identities = 44/55 (80%), Positives = 49/55 (89%), Gaps = 2/55 (3%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQV 255
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQL 87
Score = 69.7 bits (163), Expect = 8e-13
Identities = 25/52 (48%), Positives = 40/52 (76%)
Frame = +3
Query: 258 LNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+NP T+FDAKRLIGR +++ +QQ +KHWPFK++++ KP ++++ ETK
Sbjct: 89 INPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETK 140
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 89.8 bits (213), Expect = 7e-19
Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 2/55 (3%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQV 255
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQL 90
Score = 67.3 bits (157), Expect = 4e-12
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +3
Query: 258 LNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+NP T+FDAKRLIGR ++D +Q +KHWPFKVI++ KP ++++ + K
Sbjct: 92 INPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNK 143
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 89.8 bits (213), Expect = 7e-19
Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 2/55 (3%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQV 255
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQL 90
Score = 67.3 bits (157), Expect = 4e-12
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +3
Query: 258 LNPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKPKIQIEFKGETK 413
+NP T+FDAKRLIGR ++D +Q +KHWPFKVI++ KP ++++ + K
Sbjct: 92 INPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNK 143
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 60.1 bits (139), Expect = 6e-10
Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 252
IGIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +3
Query: 261 NPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVI 362
N T+F KRLIGR+++DP++Q+ +K P+K++
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 60.1 bits (139), Expect = 6e-10
Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 97 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 252
IGIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +3
Query: 261 NPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVI 362
N T+F KRLIGR+++DP++Q+ +K P+K++
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 59.7 bits (138), Expect = 8e-10
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 94 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQV 255
+IGIDLGTT+SCV +Q+G V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVI 56
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 TVFDAKRLIGRKFDDPKIQQGMKHWPFKV-INECGKPKIQI 392
++FD KR+IGR++DD +Q+ M WPFKV ++ G P ++I
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 59.7 bits (138), Expect = 8e-10
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 94 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQV 255
+IGIDLGTT+SCV +Q+G V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVI 56
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 TVFDAKRLIGRKFDDPKIQQGMKHWPFKV-INECGKPKIQI 392
++FD KR+IGR++DD +Q+ M WPFKV ++ G P ++I
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 44.4 bits (100), Expect = 3e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 88 MPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 255
M +G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V
Sbjct: 1 MSVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAV 56
Score = 33.5 bits (73), Expect = 0.062
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 NPNXTVFDAKRLIGRKFDDPKIQQGMKHWPFKVINECGKP-KIQIEFKGE 407
N TV + K LIGRKF DP Q+ + P KV+ +Q+ + GE
Sbjct: 59 NIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGE 108
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 100 GIDLGTTYSCVGVWQ--HGNVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQ 252
GIDLGTTYS +G++ G I+ +D G ++ PS VAF LIG A Q
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQ 90
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 237 RSQEPGALNPNXTVFDAKRLIGRKFD--DPKIQQGMKHWPFKV-INECGKPKIQIEFKGE 407
R+ E NP T++DAKR IGR F+ + K +PFK+ ++ GK +I
Sbjct: 86 RATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSG 145
Query: 408 TK 413
TK
Sbjct: 146 TK 147
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.009
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 85 KMPAIGIDLGTTYSCVGVWQHG-NVEIIANDQGNRTTPSYVAFTDTERLIGDAA 243
++ A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 23 QLAAMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 212 VNATYDGVVRLPWSFAMISTFPCCH 138
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 212 VNATYDGVVRLPWSFAMISTFPCCH 138
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 212 VNATYDGVVRLPWSFAMISTFPCCH 138
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 138 MAARERGDHRERPGQPYHTIVRRVHGHGASHRRRSQEPG 254
M ++ +E G P H +V+R G G RS + G
Sbjct: 192 MHEHQKRSTQEVSGHPEHHLVKRSGGEGGHRHHRSTDQG 230
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 276 VFDAKRLIGRKFDDPKIQQGMKHWPFKVINE 368
V D ++G FD+ Q+ + W F+V+N+
Sbjct: 608 VIDCSAVVGWLFDEKMWQEHDRQWLFEVLNQ 638
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 274 PCSTRRG*SGGNSTTPRFSRA*STGPSK*STNAANRKYRSSSKVR 408
PC++ S G ST S + + GPS +TN+A+ + +S+ +
Sbjct: 633 PCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSETPCNSETQ 677
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 274 PCSTRRG*SGGNSTTPRFSRA*STGPSK*STNAANRKYRSSSKVR 408
PC++ S G ST S + + GPS +TN+A+ + +S+ +
Sbjct: 671 PCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSETPCNSETQ 715
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 274 PCSTRRG*SGGNSTTPRFSRA*STGPSK*STNAANRKYRSSSKVR 408
PC++ S G ST S + + GPS +TN+A+ + +S+ +
Sbjct: 709 PCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSETPCNSETQ 753
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,578,957
Number of Sequences: 27780
Number of extensions: 193878
Number of successful extensions: 566
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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