Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00150
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 137 9e-33
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 137 9e-33
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 136 2e-32
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 136 2e-32
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 136 2e-32
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 135 4e-32
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 135 4e-32
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 135 4e-32
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 135 4e-32
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 135 4e-32
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 135 4e-32
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 135 4e-32
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 32 0.38
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 30 1.5
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 30 1.5
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 30 1.5
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 30 2.0
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 24 4.4
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 24 4.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 4.6
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 29 4.6
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 29 4.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 4.6
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 29 4.6
Z68318-6|CAA92695.2| 272|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical p... 28 8.1
AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical ... 28 8.1
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 28 8.1
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 137 bits (331), Expect = 9e-33
Identities = 76/150 (50%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-R 477
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + S + R
Sbjct: 80 TATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHETENKAEEVAR 139
Query: 478 ATCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 657
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++
Sbjct: 140 KLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRT 199
Query: 658 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ ++LK SVQKLQKEVDRLE
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLE 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 92 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRR 253
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRR
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR 63
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 137 bits (331), Expect = 9e-33
Identities = 76/150 (50%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-R 477
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + S + R
Sbjct: 80 TATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHETENKAEEVAR 139
Query: 478 ATCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 657
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++
Sbjct: 140 KLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRT 199
Query: 658 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ ++LK SVQKLQKEVDRLE
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLE 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 92 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRR 253
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRR
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR 63
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 136 bits (328), Expect = 2e-32
Identities = 74/150 (49%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-R 477
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +A R + R
Sbjct: 80 TATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVAR 139
Query: 478 ATCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 657
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++
Sbjct: 140 KLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRT 199
Query: 658 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ ++LK SVQKLQKEVDRLE
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLE 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 92 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRR 253
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRR
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR 63
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 136 bits (328), Expect = 2e-32
Identities = 74/150 (49%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-R 477
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +A R + R
Sbjct: 80 TATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVAR 139
Query: 478 ATCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 657
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++
Sbjct: 140 KLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRT 199
Query: 658 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ ++LK SVQKLQKEVDRLE
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLE 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 92 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRR 253
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRR
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR 63
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 136 bits (328), Expect = 2e-32
Identities = 74/150 (49%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-R 477
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +A R + R
Sbjct: 80 TATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVAR 139
Query: 478 ATCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 657
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++
Sbjct: 140 KLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRT 199
Query: 658 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ ++LK SVQKLQKEVDRLE
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLE 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 92 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRR 253
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRR
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR 63
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 18 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 77
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 78 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 137
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 138 SSRLKEAETRAEFAERSVQKLQKEVDRLE 166
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 135 bits (326), Expect = 4e-32
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RA 480
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A R R
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 481 TCSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 660
A AEERAE + KIVELEEELRVVGNNLKSLEVSEEKA +RE++YE ++ +
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 661 DAQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
++LK SVQKLQKEVDRLE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLE 257
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 32.3 bits (70), Expect = 0.38
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 322 EASQAADES---ERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSY 492
+ SQ +ES + +R+ +N++ ++D IL+ +L + + + RN +
Sbjct: 97 DKSQYLEESSLEDEMREIEQNKSYLDDPLTKILKKELEEIKNYEDFQVRNEQVLDNIII- 155
Query: 493 GAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYE 642
P + EQS K+ L EEL +G + E EE+ T+ + ++
Sbjct: 156 -KKPLYRPIQPEQSIPKVSSLAEELNAIGKKVLQKEEIEEEVTQPDRIFK 204
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 544 IVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXXXXXXXXXXSVQKL 723
I L+ EL + + +K LE + +AT+R Y+T ++ L++ K +Q++
Sbjct: 456 IKNLQVELATLESTVKQLERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQI 515
Query: 724 QKEVDRLE 747
++ E
Sbjct: 516 DEDAKNAE 523
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 544 IVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXXXXXXXXXXSVQKL 723
I L+ EL + + +K LE + +AT+R Y+T ++ L++ K +Q++
Sbjct: 456 IKNLQVELATLESTVKQLERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQI 515
Query: 724 QKEVDRLE 747
++ E
Sbjct: 516 DEDAKNAE 523
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 544 IVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXXXXXXXXXXSVQKL 723
I L+ EL + + +K LE + +AT+R Y+T ++ L++ K +Q++
Sbjct: 501 IKNLQVELATLESTVKQLERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQI 560
Query: 724 QKEVDRLE 747
++ E
Sbjct: 561 DEDAKNAE 568
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +1
Query: 376 RTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGPRGAEERAEQSDCKIVE 552
R N + + I + ++ PR T N+ + SYG R EQSD +I E
Sbjct: 109 RANRSSESMEIRNGARERLSTPPRKETSNSMNTSSDVSYGRNRAPPIVRPEQSDSEIDE 167
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 514 EERAEQSDCKIVELEEELRVVGN-NLKSLEVSEEKATKREETYETHLKLLDAQLK 675
+ER D + E E LR+ + K LE E KRE+ E H K +L+
Sbjct: 349 KERPSSPDSEAEEREHNLRIEKERHQKELEFRREALRKREQEREEHKKRAQEELR 403
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 508 GAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLK 654
GA E E+ KIVELEE L+ +K E + K+ E H K
Sbjct: 501 GARESIEEKK-KIVELEELLKETEKRIKESEHRRREDQKKFEAMRLHYK 548
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 508 GAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLK 654
GA E E+ KIVELEE L+ +K E + K+ E H K
Sbjct: 501 GARESIEEKK-KIVELEELLKETEKRIKESEHRRREDQKKFEAMRLHYK 548
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 379 CGSPAPCVFARIHRRPGWPRTA 314
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 4.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 391 PPCWCGSPA 365
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 379 CGSPAPCVFARIHRRPGWPRTA 314
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 391 PPCWCGSPA 365
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.6
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Frame = +1
Query: 334 AADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGP-RG 510
A + +ER RK E D+ AQ+S S+ R + A +
Sbjct: 1700 ANEAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKA 1759
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQ---LKXX 681
AEER++++ L EELR + S V + ++ E ++L +A+ LK
Sbjct: 1760 AEERSKKAIADATRLAEELRQEQEH--SQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGG 1817
Query: 682 XXXXXXXXXSVQKLQKEVD 738
V++L+ E+D
Sbjct: 1818 KKVIAKLEQRVRELESELD 1836
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.6
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Frame = +1
Query: 334 AADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGP-RG 510
A + +ER RK E D+ AQ+S S+ R + A +
Sbjct: 1700 ANEAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKA 1759
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQ---LKXX 681
AEER++++ L EELR + S V + ++ E ++L +A+ LK
Sbjct: 1760 AEERSKKAIADATRLAEELRQEQEH--SQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGG 1817
Query: 682 XXXXXXXXXSVQKLQKEVD 738
V++L+ E+D
Sbjct: 1818 KKVIAKLEQRVRELESELD 1836
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 337 ADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGPRGAE 516
ADE ++ + RT ++ +R L + + ++ ++ N + T YG+ PR +
Sbjct: 311 ADELPPVKPMISLRTQLDMERRPQLMTYVGKRSAETQTELANYESITPTVRYGSIPRSSR 370
Query: 517 ER 522
ER
Sbjct: 371 ER 372
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 337 ADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGPRGAE 516
ADE ++ + RT ++ +R L + + ++ ++ N + T YG+ PR +
Sbjct: 311 ADELPPVKPMISLRTQLDMERRPQLMTYVGKRSAETQTELANYESITPTVRYGSIPRSSR 370
Query: 517 ER 522
ER
Sbjct: 371 ER 372
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 4.6
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Frame = +1
Query: 334 AADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGP-RG 510
A + +ER RK E D+ AQ+S S+ R + A +
Sbjct: 1703 ANEAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKA 1762
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQ---LKXX 681
AEER++++ L EELR + S V + ++ E ++L +A+ LK
Sbjct: 1763 AEERSKKAIADATRLAEELRQEQEH--SQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGG 1820
Query: 682 XXXXXXXXXSVQKLQKEVD 738
V++L+ E+D
Sbjct: 1821 KKVIAKLEQRVRELESELD 1839
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 255 PTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 392
P GP GA ++ V GQPG + G G+P Q GG
Sbjct: 103 PAGPPGPPGQPGAQGEQGHVEVSGQPGAPRPQGPAGGPGQPVQSGG 148
>Z68318-6|CAA92695.2| 272|Caenorhabditis elegans Hypothetical
protein T21B10.5 protein.
Length = 272
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 414 GSTVTGELIAEESDKKYEEVARNLFLW 494
GS+ E + E+ KY++ A+N F+W
Sbjct: 246 GSSYGNEFVESENGNKYKKPAKNPFIW 272
>Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQ 669
A E ++ ++ E EE+ + N+ LE +T RE T LKLL+ +
Sbjct: 520 ASTSQETTEWEVKEEMEEIEEITKNIGDLEAELVVSTTRERERYTLLKLLETK 572
>AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQ 669
A E ++ ++ E EE+ + N+ LE +T RE T LKLL+ +
Sbjct: 520 ASTSQETTEWEVKEEMEEIEEITKNIGDLEAELVVSTTRERERYTLLKLLETK 572
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 514 EERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQL 672
++ E ++ E +EEL +VGN L+ + ++ KR ++ + L A+L
Sbjct: 260 KQDTESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAEL 312
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +3
Query: 165 TSARSTTNGCKWKLCEEKKLSPKWLP*TDVPTAGGGPREVRGASRDRHRQAVRGQP 332
TS S T + + SP + VPTA GG R ++R +++G P
Sbjct: 82 TSTVSATRSSHCSVSLPRPSSPSIRSNSSVPTASGGARNGSPSTRSSTSSSIQGSP 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,978,422
Number of Sequences: 27780
Number of extensions: 269240
Number of successful extensions: 1261
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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