Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00150
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07190.1 68416.m00857 expressed protein 39 0.004
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 36 0.038
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 33 0.15
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 33 0.20
At3g46160.1 68416.m04995 protein kinase-related contains eukaryo... 32 0.35
At1g14680.1 68414.m01746 hypothetical protein 32 0.35
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 31 0.61
At4g40020.1 68417.m05666 hypothetical protein 31 1.1
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 2.5
At1g47900.1 68414.m05334 expressed protein 29 2.5
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 29 3.3
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 3.3
At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger) fa... 28 5.7
At5g56210.1 68418.m07014 expressed protein ; expression supporte... 28 5.7
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 28 5.7
At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7) ide... 28 7.6
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 28 7.6
At5g27220.1 68418.m03247 protein transport protein-related low s... 28 7.6
At2g20240.1 68415.m02365 expressed protein 28 7.6
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 28 7.6
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 28 7.6
At5g43760.1 68418.m05352 beta-ketoacyl-CoA synthase, putative si... 27 10.0
At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)... 27 10.0
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 27 10.0
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 27 10.0
At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UD... 27 10.0
At1g68790.1 68414.m07863 expressed protein 27 10.0
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 10.0
At1g35940.1 68414.m04463 AT hook motif-containing protein-relate... 27 10.0
>At3g07190.1 68416.m00857 expressed protein
Length = 220
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 514 EERAEQSDCKIVELEEELRVVGNNLKSLE-VSEEKATKREETYETHLKLLDAQLKXXXXX 690
+E+ E++ +I +L+E+L V NLK LE S+EK TK ET E H+ L Q
Sbjct: 140 KEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKL-ETAEAHVTALQKQSSELLLE 198
Query: 691 XXXXXXSVQKLQKEV 735
Q LQ ++
Sbjct: 199 YDRLLEDNQNLQSQI 213
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo
sapiens]
Length = 927
Score = 35.5 bits (78), Expect = 0.038
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLS--QANSSPRSRTRNTKRW 474
T ++L EA A +E +++ R + R+ +LEAQLS +A S++ +R
Sbjct: 647 TLNSRLQEAESKAATAEERERSVNERLSQTLSRINVLEAQLSCLRAEQGQLSKSLEKERQ 706
Query: 475 RAT---CSYGAGPRGA---EERAEQSDCKIVEL----EEELR--VVGNNLKSLEVSEEKA 618
RA Y A A E RA Q + +I EL ++EL+ ++ N L ++ EKA
Sbjct: 707 RAAENRQEYLAAKEEADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKA 766
Query: 619 TK 624
++
Sbjct: 767 SR 768
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLK 675
AE RAE + KI EL+ + L L+ +++K TK+ + E ++ L+ Q++
Sbjct: 362 AESRAESGEAKIKELDAANLELTEELNFLKDADDKKTKKVNSLEKQVRELEVQVQ 416
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/140 (18%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 334 AADESERIRKALENRTNM-EDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGPRG 510
A +E+ + +K L+ M E+ + + + Q+ + S + + ++ + +Y G
Sbjct: 250 AEEEARKDQKLLQRLNFMVENKQYRLKKLQIKYSQDSVKLKYETEEKEKILRAYSEDLTG 309
Query: 511 AEERAEQSDCKIVELEEELRV-VGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXXX 687
++++ +I E+ +V + + +K LE+ + + KRE ET K++ +L+
Sbjct: 310 RQQKSTDHFNRIFADHEKQKVQLESQIKELEIRKLELAKREAENETQRKIVAKELEQNAA 369
Query: 688 XXXXXXXSVQKLQKEVDRLE 747
S + QK ++ +
Sbjct: 370 INSYVQLSALEQQKTREKAQ 389
>At3g46160.1 68416.m04995 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 393
Score = 32.3 bits (70), Expect = 0.35
Identities = 26/105 (24%), Positives = 44/105 (41%)
Frame = +1
Query: 340 DESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSYGAGPRGAEE 519
D+S R K L++ T + + V +A S + RW T G R +
Sbjct: 15 DDSNRPHKKLKHSTTISETSVIEDDADSSTQMGHSIKTIPKSDRWVVTRYLGNSSRSSVY 74
Query: 520 RAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLK 654
AE + +E EE+ +KS+E+S+ EE + + L+
Sbjct: 75 LAEST----IEGEEDYLPDEMTIKSIEISQASRLMNEEKFLSRLQ 115
>At1g14680.1 68414.m01746 hypothetical protein
Length = 290
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 514 EERAEQSDCKIVELEEELRVVGNNLKSLEVSEE 612
+ERA +++ ++ ELEEE+R + + +KS SEE
Sbjct: 120 DERAREAESRVRELEEEVRKMSDEIKSRIESEE 152
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 31.5 bits (68), Expect = 0.61
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Frame = +1
Query: 340 DESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-----RATCSYGAGP 504
D S +++A +N + + V LE +L +A S + + K + S
Sbjct: 723 DLSLFLKRAEQNEHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHD 782
Query: 505 RGAEERAEQSDCKIVELEEELRVVGNNLKSLE------VSEEKATKREET-YETHLKLLD 663
+ E R + + I ++ +++ +LKS E V EE+A K+E++ E+HL L+
Sbjct: 783 KNREGRLKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLE 842
Query: 664 AQLKXXXXXXXXXXXSVQKLQK 729
Q+ V LQK
Sbjct: 843 TQISTLTSEVDEQRAKVDALQK 864
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 511 AEERAEQSDCKIVELEEELRVVGNNLKS---LEVSEEKA 618
A E A+ S K+ EL EE++ V N LKS E++ EKA
Sbjct: 140 AHEAAQASSLKVSELLEEMKSVKNELKSATDAEMTNEKA 178
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Frame = +1
Query: 313 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSY 492
KL E S+ +E ++IRK E R+N ++E Q ++ N+ + + +R +
Sbjct: 1392 KLDE-SKEKEEHKKIRKPTEERSN-----APVIEKQGNKKNAEEEMQDKIDRRGKNQEIK 1445
Query: 493 GAGPRGAEERAEQSDCKIVELEE-ELRVVGNNLKSLEVSE-----EKATKREETYETH 648
G P G E KI E E + N+ S ++ + EK K E E H
Sbjct: 1446 GQEPYGVLRNGEHD--KITEYHRGEEKGTAENVSSTKIQQTKDELEKPRKPSEISENH 1501
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 553 LEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXXXXXXXXXXSVQKLQKE 732
LEE+++ +K +V + + E+YE +K + Q+ VQKL ++
Sbjct: 55 LEEQIKSYDVQIKGYDVQVKTYENQVESYEEQVKDFEEQIDAYDEKVHEYEEQVQKLNED 114
Query: 733 VDRL 744
V+ L
Sbjct: 115 VEDL 118
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +1
Query: 325 ASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW-RATCSYGAG 501
AS A E ++ + +E R E++ + + +A ++ R + R
Sbjct: 418 ASCAEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETER 477
Query: 502 PRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYE 642
+ EE A + + + EEE + K E E+A KREE E
Sbjct: 478 KKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEERE 524
Score = 28.7 bits (61), Expect = 4.3
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +1
Query: 304 ATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRA 480
A +LS+ + +E +R + +E R E++ EA+ + + R T+R +
Sbjct: 421 AEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKR 480
Query: 481 TCSYGAGPRGAEERAEQSDCKIVE-----LEEELRVVGNNLKSLEVSEEKATKREE 633
A R E + E+ + K E EEE + E EE A KREE
Sbjct: 481 E-EEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREE 535
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 313 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTK-RWRATCS 489
K ++ S E +K L R DD S+ N + +N K + +
Sbjct: 1408 KQNKISLLEKELTNCKKDLSEREKRLDDAQQAQATMQSEFNKQKQELEKNKKIHYTLNMT 1467
Query: 490 YGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLD 663
+ +E ++Q+ +LEE G + V E+ +REE E +++LD
Sbjct: 1468 KRKYEKEKDELSKQNQSLAKQLEEAKEEAGKRTTTDAVVEQSVKEREEK-EKRIQILD 1524
>At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 307
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 301 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRW 474
T + +E DE E + +++E R E+D V LE+ S + S + + +RW
Sbjct: 54 TEEEETTEQRDVDDEEEPLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRW 111
>At5g56210.1 68418.m07014 expressed protein ; expression supported
by MPSS
Length = 509
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +1
Query: 526 EQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQL 672
+ + ++ L+ E+ + NN++ LE+ E+A + E ET ++ L++ +
Sbjct: 337 KMGEMELTSLDSEILNLVNNVEHLEIKLEEAKRILEVKETQIRELESTI 385
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 236 PLRTQLLLFA*FPLATVCGTPRTRPYIFPFPLSFDAF 126
P+ QLL FA V + +PYI F L+F+ F
Sbjct: 372 PMSEQLLFFATLVARKVFNVKKIKPYIPDFKLAFEHF 408
>At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7)
identical to fibrillarin 1 GI:9965653 from [Arabidopsis
thaliana]; C-terminus identical to SKP1 interacting
partner 7 GI:10716959 from [Arabidopsis thaliana];
contains Pfam domain PF01269: Fibrillarin
Length = 308
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +3
Query: 264 GGGPREVRGAS--RDRHRQAVRGQ--PGRR*IRANTQGAGEPHQHGG 392
GGG RG S R R R A RG+ P R ++ ++ EPH+H G
Sbjct: 32 GGGRSGDRGRSGPRGRGRGAPRGRGGPPRGGMKGGSKVIVEPHRHAG 78
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 582 VTNDTELLLKLN-DFAIALFGAFLRPSRSCSIRTSCAPPL 466
VT TEL L N D+ IA A L S SCS S PP+
Sbjct: 554 VTYQTELFLDKNKDYVIAEHQALLNSS-SCSFVASLFPPM 592
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/88 (21%), Positives = 37/88 (42%)
Frame = +1
Query: 484 CSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLD 663
CS R + E + ++ +EE++ + ++LK + E + K +E+ H K L
Sbjct: 514 CSVKDTYRECLQNWEIKEKELKSFQEEVKKIQDSLKDFQSKEAELVKLKESLTEHEKELG 573
Query: 664 AQLKXXXXXXXXXXXSVQKLQKEVDRLE 747
+ K +KL +RL+
Sbjct: 574 LKKKQIHVRSEKIELKDKKLDAREERLD 601
>At2g20240.1 68415.m02365 expressed protein
Length = 713
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 319 SEASQAADESERIRKALENRTNMEDDRVA---ILEAQLSQANSSPRSRTRNTKRWRATCS 489
S++ + + ES + A E ++ +DR + ++ + S+PRSR++++ R TC
Sbjct: 10 SKSKETSTESMKKLIAREMSKDVVEDRQSSNNVVAKLMGLETSAPRSRSKSSSRCSLTC- 68
Query: 490 YGAGPRGAEERAEQS 534
G+ G R +++
Sbjct: 69 VGSKEAGKHHREDET 83
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator of
chromosome condensation (RCC1) family protein similar to
zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 487 SYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDA 666
S+ G +E+ EQ K +LEEEL LK + + + + ++ L
Sbjct: 841 SFNQDMAGLKEQVEQLASKAHQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTT 900
Query: 667 QLK 675
QLK
Sbjct: 901 QLK 903
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 430 ANSSPRSRTRNTKRWRAT-----CSYGAGPRGAEERAEQSDCKIVELEEELRVVGNNLKS 594
AN+ PRSR+ WR T S+ G R E D ++L EE+R +++K+
Sbjct: 227 ANTPPRSRSTGLSNWRITELLFPRSHSTG-HSLVPRVENLDRFTLQLPEEVRRQLSHMKT 285
Query: 595 L 597
L
Sbjct: 286 L 286
>At5g43760.1 68418.m05352 beta-ketoacyl-CoA synthase, putative
similar to beta-ketoacyl-CoA synthase [Simmondsia
chinensis][GI:1045614]
Length = 529
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 236 PLRTQLLLFA*FPLATVCGTPRTRPYIFPFPLSFDAF 126
P+ QLL FA V + +PYI F L+F+ F
Sbjct: 380 PMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHF 416
>At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)
family protein similar to SP|O93806
Glucosamine-phosphate N-acetyltransferase (EC 2.3.1.4)
(Phosphoglucosamine transacetylase) (Phosphoglucosamine
acetylase) {Candida albicans}; contains Pfam profile
PF00583: acetyltransferase, GNAT family
Length = 149
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 408 LGGSTVTGELIAEESDKKYEEV 473
LG TVTG + EE D+++EE+
Sbjct: 23 LGQLTVTGSVTDEEFDRRFEEI 44
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 415 PPRWQRDHPPCWCGSPAPCVFARIHRRPGWPR-TAWRWRSRDAPRTSRGPPP 263
PPR +PP GSP P +R+ PR ++ R P + PPP
Sbjct: 1167 PPRM---NPPMHYGSPEPSYSSRVSLSKSMPRGEGSNFQHRPYPSSHPPPPP 1215
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 454 SDSSAMSSPVTVEPPRWQRDHPPCWCGSPAPC 359
S SS++ +PV + P PP +C PC
Sbjct: 48 SSSSSLLAPVILNSPVASSSPPPIYCAPKFPC 79
>At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative similar to sucrose synthase
GI:6682841 from [Citrus unshiu]
Length = 942
Score = 27.5 bits (58), Expect = 10.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 313 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQANSSPRSRTRNTKRWRATCSY 492
++ E AAD SER++K LE ++ E ++ ++ Q +S S RN C Y
Sbjct: 867 EVREGLLAADASERVKKVLE--SSEEKQKLEKMKIAYGQQHSQGASPVRNLFWSVVVCLY 924
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.5 bits (58), Expect = 10.0
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +1
Query: 505 RGAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDAQLKXXX 684
R +E E +I +L+ E+ L E + EK +EE + K LDA+LK
Sbjct: 376 RSLDEELEGKKAEIEQLQVEISHKEEKLAKREAALEK---KEEGVKKKEKDLDARLKTVK 432
Query: 685 XXXXXXXXSVQKLQKEVDRL 744
+KL E +RL
Sbjct: 433 EKEKALKAEEKKLHMENERL 452
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 415 PPRWQRDHPPCWCGSPA-PCVFARIHRRPGWP 323
PP + R PPC PA P R RRP +P
Sbjct: 5 PPHFSRAKPPCRLSDPAQPHKLCR-RRRPSYP 35
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 1678
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 538 CKIVELEEELRVVGNNLKSLEVSE 609
CK+++L + +R++ NNL + E E
Sbjct: 1374 CKVLKLTKNMRLLANNLSATEAKE 1397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,058
Number of Sequences: 28952
Number of extensions: 252378
Number of successful extensions: 950
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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