Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00149
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122250-1|AAM52762.1|  804|Drosophila melanogaster SD05665p pro...    31   1.3  
AF387786-1|AAL57300.1|  809|Drosophila melanogaster TRC8 protein.      31   1.3  
AE014297-4388|AAS65223.1|  809|Drosophila melanogaster CG2304-PD...    31   1.3  
AE014297-4387|AAN14174.1|  804|Drosophila melanogaster CG2304-PB...    31   1.3  
AE014297-4386|AAF56900.1|  804|Drosophila melanogaster CG2304-PA...    31   1.3  
AE014298-3191|AAN09573.1| 1342|Drosophila melanogaster CG14616-P...    29   4.1  
BT029966-1|ABM92840.1|  297|Drosophila melanogaster IP17876p pro...    29   7.1  

>AY122250-1|AAM52762.1|  804|Drosophila melanogaster SD05665p
           protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 356 VLNPATV-FVVCVYSFLSRMCVPMVATR 436
           VL+  TV FV+CV++FLS  C+ M+ TR
Sbjct: 119 VLSTTTVKFVLCVFAFLSAACIFMLWTR 146


>AF387786-1|AAL57300.1|  809|Drosophila melanogaster TRC8 protein.
          Length = 809

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 356 VLNPATV-FVVCVYSFLSRMCVPMVATR 436
           VL+  TV FV+CV++FLS  C+ M+ TR
Sbjct: 119 VLSTTTVKFVLCVFAFLSAACIFMLWTR 146


>AE014297-4388|AAS65223.1|  809|Drosophila melanogaster CG2304-PD,
           isoform D protein.
          Length = 809

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 356 VLNPATV-FVVCVYSFLSRMCVPMVATR 436
           VL+  TV FV+CV++FLS  C+ M+ TR
Sbjct: 119 VLSTTTVKFVLCVFAFLSAACIFMLWTR 146


>AE014297-4387|AAN14174.1|  804|Drosophila melanogaster CG2304-PB,
           isoform B protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 356 VLNPATV-FVVCVYSFLSRMCVPMVATR 436
           VL+  TV FV+CV++FLS  C+ M+ TR
Sbjct: 119 VLSTTTVKFVLCVFAFLSAACIFMLWTR 146


>AE014297-4386|AAF56900.1|  804|Drosophila melanogaster CG2304-PA,
           isoform A protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 356 VLNPATV-FVVCVYSFLSRMCVPMVATR 436
           VL+  TV FV+CV++FLS  C+ M+ TR
Sbjct: 119 VLSTTTVKFVLCVFAFLSAACIFMLWTR 146


>AE014298-3191|AAN09573.1| 1342|Drosophila melanogaster CG14616-PE,
            isoform E protein.
          Length = 1342

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 222  QNHVQRFRYKHHTSEANKSVLKTLIKHTAHIFIRLNSDTNDALCT 356
            Q+HV + +Y+HH       +  TL ++     I  N+ T  + CT
Sbjct: 1206 QHHVHQHQYQHHRKTTTTIINNTLNENHTTATITNNTTTTPSCCT 1250


>BT029966-1|ABM92840.1|  297|Drosophila melanogaster IP17876p
           protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 435 RVATIGTHIRLKNEYTQTTKTVAGFNTYIKHRLYP 331
           R+ TI T   LK+E TQT ++     TYI  +L+P
Sbjct: 212 RIFTINTKGELKHELTQTFQSSYCSMTYIVDQLFP 246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,739,532
Number of Sequences: 53049
Number of extensions: 412816
Number of successful extensions: 1048
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)