Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00148
(795 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 3e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 159 2e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 7e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 139 3e-33
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 97 2e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 71 8e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 60 2e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.5
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 3.3
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40) 29 3.3
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.3
SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 29 5.7
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 7.6
SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 7.6
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (394), Expect = 3e-40
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 689
TAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQAS
Sbjct: 222 TAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQAS 281
Query: 690 IEIDSLFEGIDFYTSITRARFEEL 761
IEIDSLFEGIDFYTSITRARFEEL
Sbjct: 282 IEIDSLFEGIDFYTSITRARFEEL 305
Score = 150 bits (364), Expect = 1e-36
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = +1
Query: 262 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 441
V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+
Sbjct: 139 VTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIY 198
Query: 442 DLGGGTFDVSILTIEDGIFEVKS 510
DLGGGTFDVS+LTIEDGIFEVKS
Sbjct: 199 DLGGGTFDVSVLTIEDGIFEVKS 221
Score = 144 bits (348), Expect = 1e-34
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +2
Query: 2 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED 181
GDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE
Sbjct: 52 GDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEK 111
Query: 182 KTFFPEEVSSMVLTKMKETAEAYL 253
K+FFPEE+SSMVLTKMKETAEAYL
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYL 135
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 159 bits (386), Expect = 2e-39
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 689
TAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+AS
Sbjct: 223 TAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEAS 282
Query: 690 IEIDSLFEGIDFYTSITRARFEELTPICSGL 782
IE+DSLFEGIDFYT I+RARFE+L CS L
Sbjct: 283 IEVDSLFEGIDFYTKISRARFEDL---CSDL 310
Score = 148 bits (358), Expect = 6e-36
Identities = 72/84 (85%), Positives = 80/84 (95%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 441
V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIF
Sbjct: 139 VTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIF 198
Query: 442 DLGGGTFDVSILTIEDG-IFEVKS 510
DLGGGTFDVSILTI+DG +FEVKS
Sbjct: 199 DLGGGTFDVSILTIDDGSLFEVKS 222
Score = 143 bits (346), Expect = 2e-34
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 2 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED 181
GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE
Sbjct: 52 GDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGER 111
Query: 182 KTFFPEEVSSMVLTKMKETAEAYLAK 259
KTF EE+SSMVL KMKETAEAYL +
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQ 137
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 154 bits (374), Expect = 7e-38
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = +1
Query: 247 LSCKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 426
L CK V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ER
Sbjct: 228 LGCK-VTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQER 286
Query: 427 NVLIFDLGGGTFDVSILTIEDGIFEVKS 510
NVLIFDLGGGTFDVS+L+IEDGIFEVKS
Sbjct: 287 NVLIFDLGGGTFDVSVLSIEDGIFEVKS 314
Score = 153 bits (371), Expect = 2e-37
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 689
T GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQAS
Sbjct: 315 THGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQAS 374
Query: 690 IEIDSLFEGIDFYTSITRARFEEL 761
IEIDSL++GIDFYTSITRARFEE+
Sbjct: 375 IEIDSLYDGIDFYTSITRARFEEM 398
Score = 122 bits (293), Expect = 4e-28
Identities = 67/109 (61%), Positives = 74/109 (67%), Gaps = 25/109 (22%)
Frame = +2
Query: 2 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED 181
GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE
Sbjct: 52 GDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGET 111
Query: 182 KTFFPEEV-------------------------SSMVLTKMKETAEAYL 253
KTFF EEV SSMVL KMKETAEAYL
Sbjct: 112 KTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 247 LSCKTVQNAVITVPAYFNDSQRQATKDAG 333
L CK V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 160 LGCK-VTDAVVTVPAYFNDSQRQATKDAG 187
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 200 EVSSMVLTKMKETAEAYL 253
++SSMVL KMKETAEAYL
Sbjct: 211 QISSMVLNKMKETAEAYL 228
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 139 bits (336), Expect = 3e-33
Identities = 64/83 (77%), Positives = 77/83 (92%)
Frame = +1
Query: 256 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 435
K V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L
Sbjct: 835 KKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNIL 893
Query: 436 IFDLGGGTFDVSILTIEDGIFEV 504
+FDLGGGTFDVS+LTI++G+FEV
Sbjct: 894 VFDLGGGTFDVSLLTIDNGVFEV 916
Score = 116 bits (279), Expect = 2e-26
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +2
Query: 2 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED 181
GD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E
Sbjct: 750 GDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEI 809
Query: 182 KTFFPEEVSSMVLTKMKETAEAYLAK 259
KTF EE+S+MVLTKMKETAEAYL K
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGK 835
Score = 99 bits (238), Expect = 2e-21
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 689
T GDTHLGGEDFD ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA
Sbjct: 919 TNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQAR 978
Query: 690 IEIDSLFEGIDFYTSITRARFEEL 761
+EI+S FEG DF +TRARFEEL
Sbjct: 979 VEIESFFEGEDFSEMLTRARFEEL 1002
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +1
Query: 259 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 438
TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++
Sbjct: 168 TVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMV 226
Query: 439 FDLGGGTFDVSILTIEDGIF 498
DLGGGT DVS+L I+ G+F
Sbjct: 227 VDLGGGTLDVSLLNIQGGMF 246
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGE 178
G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G V KG
Sbjct: 81 GEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGN 140
Query: 179 DKTFFPEEVSSMVLTKMKETAEAYLAKLCRMQLSRFPRTSMTLKDKPQKMQVPSLA 346
PEE+ V+ K++ AE L + P +K + ++ SLA
Sbjct: 141 FTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLA 195
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +3
Query: 513 AGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 692
AG+ LGG+DF+ R + + +Q +++ + L T ++RLR E AK L+ + + +I
Sbjct: 252 AGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTI 310
Query: 693 E--IDSLFEG---IDFYTSITRARFEEL 761
+ + SL EG + F +I+R FE +
Sbjct: 311 KLMLPSLSEGKKIVKFKETISRKMFETI 338
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 71.7 bits (168), Expect = 6e-13
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Frame = +3
Query: 492 YLRGEI----TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 659
+L+G++ TA + +LGG DFD +V HF QEFK KYK D+ ++ +A +L CE+ K
Sbjct: 272 FLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLK 331
Query: 660 RTLSSST-QASIEIDSLFEGIDFYTSITRARFEEL 761
+ +S++T + I I+ E D + + RA+FEEL
Sbjct: 332 KLMSANTSEIPINIECFMEDKDVHGRMKRAQFEEL 366
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = +1
Query: 247 LSCKT-VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG--- 414
++ KT V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 190 IALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPT 249
Query: 415 TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSPPATP 525
RNV+ D+G + V I G +V S P
Sbjct: 250 DKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEP 286
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 32 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 208
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 209 SMVLTKMKETAEAYL 253
+M+ T++K TAE L
Sbjct: 178 AMLFTRLKTTAEIAL 192
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 71.3 bits (167), Expect = 8e-13
Identities = 47/84 (55%), Positives = 53/84 (63%), Gaps = 26/84 (30%)
Frame = +1
Query: 256 KTVQNAVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRI 363
+ V+ AVITVPA+FND+QRQATKDAGTI+GL+ VLRI
Sbjct: 36 QAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRI 95
Query: 364 INEPTAAAIAYGLDKK--GTGERN 429
INEPTAAAIAYGLDK G ERN
Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 155 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLAKLCRMQLSRFP 289
I V GE ++F PE++S++VL ++K AEA+L + + + P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 689
T GDT+LGGEDFDN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q
Sbjct: 29 TNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTD 88
Query: 690 IEI 698
I +
Sbjct: 89 INL 91
Score = 45.2 bits (102), Expect = 6e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 430 VLIFDLGGGTFDVSILTIEDGIFEVKS 510
+ ++DLGGGTFD+SIL I+ G+FEVK+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKA 28
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 60.5 bits (140), Expect = 2e-09
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +3
Query: 510 TAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSS 674
T D LGG +FD +++ +FKR K+K D TNKR+ +L+T+ E+ K LS+
Sbjct: 183 TEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILST 242
Query: 675 STQASIEIDSLFEGIDFYTSITR 743
A+ +DSL EGIDF ++R
Sbjct: 243 LESANCSVDSLCEGIDFQGQVSR 265
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +3
Query: 519 DTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 692
D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ +
Sbjct: 207 DRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFA 266
Query: 693 EIDSLFEGIDFYTSITRARFEEL 761
+I+ +F+G DF +TR EE+
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEM 289
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Frame = +1
Query: 262 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERN 429
+++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++
Sbjct: 105 IKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKH 164
Query: 430 VLIFDLGGGTFDVSIL 477
+ +D+G + +I+
Sbjct: 165 FMFYDMGASSTVATIV 180
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 566 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 658
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 430 VLIFDLGGGTFDVSILTIEDGIFEVK 507
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 557 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 646
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 436 IFDLGGGTFDVSILTIEDGIFEV 504
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 566 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 658
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
Length = 2057
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 537 HLPSGCRRR*FHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSS 379
+LP+ CR L IL GKD VEG D Y+ S + K V R +
Sbjct: 407 YLPTACR-----LTVAILKGKDLRVEGEETTEIDTYVKVSMIMGGKAVKKRKT 454
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 53 RILCCWGSSPPGSWRH 6
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 53 RILCCWGSSPPGSWRH 6
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 472 ILTIEDGIFEVKSPPATPTWEVRTLTIAWSTTLSR-SSRGNTKRTSLPTRELLGVCVLHV 648
ILT+E+G+F+ E L+ +WS R + G K S+P G C LH
Sbjct: 799 ILTLENGLFKQHDSSIRELVEFLELSRSWSLLHPRWAPCGLAKVLSVP-HCCWGSCALHH 857
Query: 649 RGQR 660
GQR
Sbjct: 858 LGQR 861
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 524 GVAGGDFTSKIPSSMVRMDTSKVPPPRSKIS 432
G+ G DFTS I +R ++VPP S IS
Sbjct: 250 GIRGNDFTSDIAIDDLRSSCTQVPPEISYIS 280
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 583 LNSWTKWLTMRLSKSSPPKWVSPAVISP 500
L+ +T+W+ R+SK P V+P I+P
Sbjct: 451 LSKFTQWIRRRMSKKDPDPAVTPKHITP 478
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 530 QVGVAGGDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 411
Q + GGDF S+ R T+ +PPP + T +P P
Sbjct: 1185 QSPMEGGDFMKGRMSNPNRPPTTAIPPPMTNTMTHSAPRP 1224
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 424 RNVLIFDLGGGTFDVSILTIEDGIFEVKSPPATPTWEVRTLTIAWSTTLSRSSRGNTKRT 603
R V+ F GGT S + E+ +FEVK P P+ +A + + S + N +
Sbjct: 905 RRVISFHSVGGTSWDSSVADEEDLFEVKKKPDKPSLLAALKPVARQES-NASLKSNKSAS 963
Query: 604 SLPTR 618
+P R
Sbjct: 964 RIPVR 968
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 243 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 64
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 63 RLASNIVL 40
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 566 LCPGVQEEIQKGPRYQQESS*AFAYCM 646
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 507 ITAGDTHLGGEDFD---NRMVNHFVQEF 581
+ AGD +GGEDFD +V+ F++ F
Sbjct: 17 VLAGDNDIGGEDFDVMSKSVVSRFIRHF 44
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 501 GEITAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACE 650
G +++ DT+ GG D D + +Q + TN+ A R R CE
Sbjct: 275 GSVSSTDTNHGGSDEDLIDYSLTLQAMRHPVMNGRPTNRNAQSRYREECE 324
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 566 LCPGVQEEIQKGPRYQQESS*AFAYCM 646
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 28.3 bits (60), Expect = 7.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -1
Query: 396 VSNRSSSRFIDD--SENVQARDGTCIFCGLSLRVIEVRGNRDNCILHSFAR*ASAVSFIF 223
++N S D+ S N A+D C L+ N D+ +H R +S+VS
Sbjct: 80 ITNGGLSHLPDNIGSINTAAKDNLCEISSLN--------NSDSATVHK--RRSSSVSSHI 129
Query: 222 VSTMELTSSGKKVLSSPLYATLIL--GLP 142
V T L+ K+L + + TLI+ GLP
Sbjct: 130 VDTWRLSKDEAKILPTVIVGTLIIVFGLP 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,666,775
Number of Sequences: 59808
Number of extensions: 538206
Number of successful extensions: 2135
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2128
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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