Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00147
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 429 SVCLSIVNYHHQL*YH 382
           S+ + +V+YHHQL  H
Sbjct: 127 SLVIKLVDYHHQLLGH 142


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 595 IFSFSAYGLENFFY 554
           +++ S+YG ENF Y
Sbjct: 39  LYAHSSYGRENFIY 52


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -3

Query: 651 HHFDKRPAPSSRTQSQHGSSLALAHMAWKISFICGHAAG 535
           HH D +P P        G   A A M  + +     AAG
Sbjct: 159 HHVDHQPVPYLTPADDRGRVAAAAAMVAETASFHHDAAG 197


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -3

Query: 465 KVFLSLTTLYTISVCLSIVNYHHQL*YHL 379
           KV +      T   C  I  Y H L YHL
Sbjct: 222 KVHIREDKRLTCPKCPFITEYKHHLEYHL 250


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 336 AVDEFVKKLIPLLSKGDIIID 398
           A+DE   KL PL  + D+I D
Sbjct: 64  AIDEETYKLTPLNEQFDVIKD 84


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 5   SWLKTFTVLHKNNSNC 52
           SW+   TV ++N +NC
Sbjct: 112 SWIFLETVANENTTNC 127


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 640 VKMVHNGIEYGDMH 681
           ++M+H G   GD+H
Sbjct: 78  IEMIHRGTFQGDIH 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,423
Number of Sequences: 336
Number of extensions: 4008
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)