BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00147
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U30255-1|AAA75302.1| 483|Homo sapiens phosphogluconate dehydrog... 123 5e-28
BC000368-1|AAH00368.1| 483|Homo sapiens phosphogluconate dehydr... 123 7e-28
AL139424-1|CAI95751.1| 483|Homo sapiens phosphogluconate dehydr... 123 7e-28
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 36 0.19
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 36 0.19
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 36 0.19
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 36 0.19
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 36 0.19
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 36 0.19
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 31 4.0
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 31 4.0
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 31 4.0
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 31 4.0
>U30255-1|AAA75302.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 123 bits (297), Expect = 5e-28
Identities = 56/82 (68%), Positives = 70/82 (85%)
Frame = +3
Query: 261 ATSLDDMVSKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCK 440
A SL +MVSKLK+PR+I+LLVKAG AVD+F++KL+PLL GDIIIDGGNS+Y DT + C+
Sbjct: 55 AQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR 114
Query: 441 ELSGTGILYVGMGVSGGEDGAR 506
+L G GIL+VG GVSGGE+G R
Sbjct: 115 DLKGKGILFVGSGVSGGEEGPR 136
Score = 97.1 bits (231), Expect = 5e-20
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +1
Query: 106 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVLG 261
+ADIALIGLAVMGQNLILNMND G+VVCAFNRTVSKV++FL NEAKGTKV+G
Sbjct: 3 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG 54
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 509 GPSLMPGGHPAAWPHIKEIFQAICAK-AKDEPCCDWVREDGAG 634
GPSLMPGG+ AWPHIK IFQ I AK EPCCDWV ++GAG
Sbjct: 138 GPSLMPGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAG 180
Score = 36.7 bits (81), Expect = 0.080
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 637 FVKMVHNGIEYGDMHL 684
FVKMVHNGIEYGDM L
Sbjct: 182 FVKMVHNGIEYGDMQL 197
>BC000368-1|AAH00368.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 123 bits (296), Expect = 7e-28
Identities = 56/82 (68%), Positives = 70/82 (85%)
Frame = +3
Query: 261 ATSLDDMVSKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCK 440
A SL +MVSKLK+PR+I+LLVKAG AVD+F++KL+PLL GDIIIDGGNS+Y DT + C+
Sbjct: 55 AQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR 114
Query: 441 ELSGTGILYVGMGVSGGEDGAR 506
+L GIL+VG GVSGGE+GAR
Sbjct: 115 DLKAKGILFVGSGVSGGEEGAR 136
Score = 97.1 bits (231), Expect = 5e-20
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +1
Query: 106 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVLG 261
+ADIALIGLAVMGQNLILNMND G+VVCAFNRTVSKV++FL NEAKGTKV+G
Sbjct: 3 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG 54
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 509 GPSLMPGGHPAAWPHIKEIFQAICAK-AKDEPCCDWVREDGAG 634
GPSLMPGG+ AWPHIK IFQ I AK EPCCDWV ++GAG
Sbjct: 138 GPSLMPGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAG 180
Score = 36.7 bits (81), Expect = 0.080
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 637 FVKMVHNGIEYGDMHL 684
FVKMVHNGIEYGDM L
Sbjct: 182 FVKMVHNGIEYGDMQL 197
>AL139424-1|CAI95751.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 123 bits (296), Expect = 7e-28
Identities = 56/82 (68%), Positives = 70/82 (85%)
Frame = +3
Query: 261 ATSLDDMVSKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCK 440
A SL +MVSKLK+PR+I+LLVKAG AVD+F++KL+PLL GDIIIDGGNS+Y DT + C+
Sbjct: 55 AQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR 114
Query: 441 ELSGTGILYVGMGVSGGEDGAR 506
+L GIL+VG GVSGGE+GAR
Sbjct: 115 DLKAKGILFVGSGVSGGEEGAR 136
Score = 97.1 bits (231), Expect = 5e-20
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +1
Query: 106 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVLG 261
+ADIALIGLAVMGQNLILNMND G+VVCAFNRTVSKV++FL NEAKGTKV+G
Sbjct: 3 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG 54
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 509 GPSLMPGGHPAAWPHIKEIFQAICAK-AKDEPCCDWVREDGAG 634
GPSLMPGG+ AWPHIK IFQ I AK EPCCDWV ++GAG
Sbjct: 138 GPSLMPGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAG 180
Score = 36.7 bits (81), Expect = 0.080
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 637 FVKMVHNGIEYGDMHL 684
FVKMVHNGIEYGDM L
Sbjct: 182 FVKMVHNGIEYGDMQL 197
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 201 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 243
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 270 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 312
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 270 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 312
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 240 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 282
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 270 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 312
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 243
I +GL +MG ++ N+ G+ V +NRT K + F++ A+
Sbjct: 270 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 312
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 KRPRKIVLLVKAGFAVDEF--VKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGILY 467
K R I +L + A++ + ++ + KG ++ID +++ KE+ G ++
Sbjct: 95 KADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF 154
Query: 468 VGMGVSGGEDGAR*DHL*CLVG 533
+ VSGG AR +L +VG
Sbjct: 155 MDAPVSGGVGAARSGNLTFMVG 176
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 KRPRKIVLLVKAGFAVDEF--VKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGILY 467
K R I +L + A++ + ++ + KG ++ID +++ KE+ G ++
Sbjct: 95 KADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF 154
Query: 468 VGMGVSGGEDGAR*DHL*CLVG 533
+ VSGG AR +L +VG
Sbjct: 155 MDAPVSGGVGAARSGNLTFMVG 176
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 115 IALIGLAVMGQNLILNMNDKGYVVCAFNRTVSK 213
I +GL +MG ++ N+ G+ V +NRT K
Sbjct: 270 IGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK 302
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 KRPRKIVLLVKAGFAVDEF--VKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGILY 467
K R I +L + A++ + ++ + KG ++ID +++ KE+ G ++
Sbjct: 95 KADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF 154
Query: 468 VGMGVSGGEDGAR*DHL*CLVG 533
+ VSGG AR +L +VG
Sbjct: 155 MDAPVSGGVGAARSGNLTFMVG 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,025,380
Number of Sequences: 237096
Number of extensions: 2264213
Number of successful extensions: 4905
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4902
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -