Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00145
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.9  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.4  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.4  
AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.    23   6.4  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 544 FIKSMKNKNKFKRFSI 591
           F+K +KNK  FKR+ +
Sbjct: 3   FVKVVKNKQYFKRYQV 18


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 72  QQTFATHCSREAAAIAP*RCCYIERAGPWQPVEYDSPIDCCL 197
           Q+     C R   A    R C + +  P Q  + DS + C L
Sbjct: 23  QEETVEECERNIPASLKERVCELRQYTPVQGKDMDSHMQCVL 64


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 72  QQTFATHCSREAAAIAP*RCCYIERAGPWQPVEYDSPIDCCL 197
           Q+     C R   A    R C + +  P Q  + DS + C L
Sbjct: 23  QEETVEECERNIPASLKERVCELRQYTPVQGKDMDSHMQCVL 64


>AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 72  QQTFATHCSREAAAIAP*RCCYIERAGPWQPVEYDSPIDCCL 197
           Q+     C R   A    R C + +  P Q  + DS + C L
Sbjct: 23  QEETVEECERNIPASLKERVCELRQYTPVQGKDMDSHMQCVL 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,642
Number of Sequences: 2352
Number of extensions: 12911
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)