Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00145
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    29   5.6  
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    29   5.6  
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    29   5.6  
AE014134-3583|AAF57254.2|  570|Drosophila melanogaster CG5929-PA...    28   9.7  

>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -2

Query: 400 VKVNSNLYAVGTAPLAANVRKRSKHTADVFCYTLYKYNIWN 278
           +K+NS+L A   + L     K +K +AD+    LYK NIWN
Sbjct: 155 MKLNSSLQAFMYSMLKDANPKAAKMSADIMI-ELYKKNIWN 194


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -2

Query: 400 VKVNSNLYAVGTAPLAANVRKRSKHTADVFCYTLYKYNIWN 278
           +K+NS+L A   + L     K +K +AD+    LYK NIWN
Sbjct: 155 MKLNSSLQAFMYSMLKDANPKAAKMSADIMI-ELYKKNIWN 194


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -2

Query: 400 VKVNSNLYAVGTAPLAANVRKRSKHTADVFCYTLYKYNIWN 278
           +K+NS+L A   + L     K +K +AD+    LYK NIWN
Sbjct: 155 MKLNSSLQAFMYSMLKDANPKAAKMSADIMI-ELYKKNIWN 194


>AE014134-3583|AAF57254.2|  570|Drosophila melanogaster CG5929-PA
           protein.
          Length = 570

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = -3

Query: 222 GQELTFLTLSSSLWVNHTQRAARVLRAQYNNIFRVLLRLPPYCSASQMFADARTDGYQAI 43
           G    FLT+    W+  T   A V  AQ  + F    R PP  +  ++ A    DGY+  
Sbjct: 224 GYRAKFLTIV--YWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLY 281

Query: 42  IRKKVAS 22
           + K+ +S
Sbjct: 282 VEKESSS 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,052,038
Number of Sequences: 53049
Number of extensions: 476091
Number of successful extensions: 1092
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)