Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00144
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 143 1e-34
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 142 2e-34
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 142 2e-34
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 142 2e-34
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 38 0.006
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.5
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 143 bits (346), Expect = 1e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 435
VT PGDHVVPLYVPQC C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+H
Sbjct: 256 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFH 315
Query: 436 FMGCSTFSQYTVVLEISLCKV 498
FMGCSTFS+YTVV +ISLCKV
Sbjct: 316 FMGCSTFSEYTVVADISLCKV 336
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDI 689
PL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D+
Sbjct: 341 PLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 400
Query: 690 NPDKFEVAKKFGVNE 734
KFE AK FG E
Sbjct: 401 IESKFEKAKMFGATE 415
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2
Query: 134 ITATGVCHTDAYTLSGKDPEGVFPVVLGH 220
I T VCHTDAYTL G DPEG+FPVVLGH
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGH 243
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 435
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 83 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 142
Query: 436 FMGCSTFSQYTVVLEISLCKV 498
FMGCSTFS+YTVV +ISLCKV
Sbjct: 143 FMGCSTFSEYTVVADISLCKV 163
Score = 109 bits (261), Expect = 3e-24
Identities = 51/68 (75%), Positives = 54/68 (79%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 196
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 197 VFPVVLGH 220
+FPVVLGH
Sbjct: 63 LFPVVLGH 70
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDI 689
PL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D+
Sbjct: 168 PLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 227
Query: 690 NPDKFEVAKKFGVNE 734
KFE AK FG E
Sbjct: 228 IESKFESAKFFGATE 242
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 435
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 83 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 142
Query: 436 FMGCSTFSQYTVVLEISLCKV 498
FMGCSTFS+YTVV +ISLCKV
Sbjct: 143 FMGCSTFSEYTVVADISLCKV 163
Score = 109 bits (261), Expect = 3e-24
Identities = 51/68 (75%), Positives = 54/68 (79%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 196
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 197 VFPVVLGH 220
+FPVVLGH
Sbjct: 63 LFPVVLGH 70
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDI 689
PL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D+
Sbjct: 168 PLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 227
Query: 690 NPDKFEVAKKFGVNE 734
KFE AK FG E
Sbjct: 228 IESKFESAKFFGATE 242
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 435
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 85 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 144
Query: 436 FMGCSTFSQYTVVLEISLCKV 498
FMGCSTFS+YTVV +ISLCKV
Sbjct: 145 FMGCSTFSEYTVVADISLCKV 165
Score = 103 bits (248), Expect = 1e-22
Identities = 51/70 (72%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 190
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 191 EGVFPVVLGH 220
EG+FPVVLGH
Sbjct: 63 EGLFPVVLGH 72
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDI 689
PL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D+
Sbjct: 170 PLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 229
Query: 690 NPDKFEVAKKFGVNE 734
KFE AK FG E
Sbjct: 230 IESKFESAKFFGATE 244
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 68 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLGH 220
G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++ GH
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGH 70
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 74 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLGH 220
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V GH
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGH 69
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 32 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 181
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLG 56
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 44 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 169
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 77 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLGH 220
L +E+ + P +V VKI G+C +D + L+ G F P+VLGH
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGH 66
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 432 VEFLSFTAESPSAIWHHTLTL 370
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 77 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLGH 220
L +E++ + P +V VK+ G+C +D +T P V P+++GH
Sbjct: 16 LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGH 66
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 SSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 178
S+ V + G+++ CL AW+ + + EVD + I CH D + L+
Sbjct: 60 STVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLNTCHEDFWNLA 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,185,154
Number of Sequences: 27780
Number of extensions: 338338
Number of successful extensions: 916
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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