BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00143 (748 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 31 1.3 SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 30 1.7 SB_6098| Best HMM Match : Gal-3-0_sulfotr (HMM E-Value=1e-39) 30 1.7 SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_30773| Best HMM Match : rve (HMM E-Value=0.0063) 30 1.7 SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 30 2.3 SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.3 SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.3 SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) 30 2.3 SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 30 2.3 SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 30 2.3 SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 30 2.3 SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.3 SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.3 SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) 30 2.3 SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) 30 2.3 SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 30 2.3 SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) 29 4.0 SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) 29 4.0 SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3 SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) 29 5.3 SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3 SB_49779| Best HMM Match : TPR_2 (HMM E-Value=0.24) 28 7.0 SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 7.0 SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24) 28 7.0 SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 28 7.0 SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 7.0 SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 >SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) Length = 2123 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +3 Query: 240 KEIENLRTTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIAS-DPETSPARISTRTAK 416 K + N+ L+ Y ++ K +P+ +R P+L + ++ P T+ I R+ Sbjct: 1677 KCVRNVSQVLQVYAQCQSSIAKNSVHSIPSPSR-PSLNIAPSSTLTPSTAGHTIDIRSTN 1735 Query: 417 MISSRYVTGQTVTVSTRKTT 476 + SR GQ T+ST KTT Sbjct: 1736 RVHSRAQEGQIPTLSTLKTT 1755 >SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) Length = 1249 Score = 30.3 bits (65), Expect = 1.7 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 324 PTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVTGQTVT 455 PT T L+ ++ +S P TSPA T T + + +T TVT Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVT 816 >SB_6098| Best HMM Match : Gal-3-0_sulfotr (HMM E-Value=1e-39) Length = 463 Score = 30.3 bits (65), Expect = 1.7 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +3 Query: 240 KEIENLRTTLKKYTTRPNTTDK 305 +E N+R+ +KK T +PNTTD+ Sbjct: 30 EETHNIRSLVKKLTNKPNTTDE 51 >SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +3 Query: 285 RPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISS 428 RP+ T T H P D R P + D +TS R S+ + + S Sbjct: 544 RPSQTPPTSLKHFPGDERTPPTSLKHVPGDEQTSQVRFSSEPSSTLRS 591 >SB_30773| Best HMM Match : rve (HMM E-Value=0.0063) Length = 336 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTA 152 YF N++ +S FPF CP V ++ ++ L SL+ + G A Sbjct: 262 YFLNIMDEYS-RFPFVLSCPDVSTSTVIKCLTSLFSLVGMPA 302 >SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) Length = 2160 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 869 FFLNVVDEYS-RFPFVFTCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 917 >SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 337 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 153 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 201 >SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 412 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 138 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 186 >SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) Length = 238 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 54 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 102 >SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) Length = 998 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 916 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 964 >SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) Length = 409 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 327 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 375 >SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) Length = 1022 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 624 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 672 >SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 748 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 471 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 519 >SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 1048 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 898 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 946 >SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1258 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 1017 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 1065 >SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) Length = 512 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 426 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 474 >SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 645 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +2 Query: 92 RSTEVLKQPTIHRSSISWPHRCLTID*IQRPEVSYSRSR-PHSWTLLEERKGNRESE 259 R T V + P S +PH C ++ Q P S ++ PH+WT + N SE Sbjct: 417 RMTSVKRYPYHFTSVTRYPHNCTSVR--QHPYTWKSVTQYPHNWTFITRYPNNWTSE 471 >SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) Length = 1032 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 532 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 580 >SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) Length = 1677 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 900 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 948 >SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) Length = 546 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV + + FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 298 FFLNVVDEY-LRFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 346 >SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) Length = 517 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV + + FPF CP V + ++ L SL+ + G A ++ GS Sbjct: 298 FFLNVVDEY-LRFPFVFPCPDVSTPTVIKCLTSLFTMFGMPAYVHSDRGS 346 >SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 477 Score = 28.7 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 254 SEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENR 367 +E + + S YHGQDGLG A G + P+ ++++ Sbjct: 151 TEGLTGDFVELSAYHGQDGLGD-AQGLREPDRTPLKDK 187 >SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) Length = 330 Score = 28.7 bits (61), Expect = 5.3 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLINGKTAVRPAN*GS 128 +F NVV +S FPF CP V + ++ L S++ + G A ++ GS Sbjct: 248 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSVFTMFGMPAYVHSDRGS 296 >SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4072 Score = 28.7 bits (61), Expect = 5.3 Identities = 23/72 (31%), Positives = 28/72 (38%) Frame = +3 Query: 261 TTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 440 T + K T P TT P T LP KI + PET+ +T + S T Sbjct: 2896 TAVPKTTAAPETTPLPKTTAAPETTTLP-----KITAAPETTAVPKTTAAPETTSVPKTT 2950 Query: 441 GQTVTVSTRKTT 476 T S KTT Sbjct: 2951 AAPETTSVPKTT 2962 Score = 27.9 bits (59), Expect = 9.2 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Frame = +3 Query: 261 TTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRS-------KIASDPETSPARISTRTAKM 419 TTL K T P TT P T +P + K + PET+P +T + Sbjct: 2860 TTLPKTTAAPETTSVPKTTAAPGTTSVPKTTAAPETTAVPKTTAAPETTPLPKTTAAPET 2919 Query: 420 ISSRYVTGQTVTVSTRKTT 476 + +T T + KTT Sbjct: 2920 TTLPKITAAPETTAVPKTT 2938 >SB_49779| Best HMM Match : TPR_2 (HMM E-Value=0.24) Length = 563 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/49 (34%), Positives = 27/49 (55%) Frame = +3 Query: 267 LKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTA 413 L +TT P+++ H+ T T PN RSK +++P+R STR + Sbjct: 437 LASFTTMPHSSAS---FHI-TSTPFPNGYRSKTRCGAQSAPSRCSTRVS 481 >SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) Length = 839 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +3 Query: 261 TTLKKYTTRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 437 T + T P TTD P T T L +K PET+PA +T + ++ Sbjct: 217 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 276 Query: 438 TGQTVTVSTRKTT 476 T T +++TT Sbjct: 277 TVAPETTVSQETT 289 >SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24) Length = 627 Score = 28.3 bits (60), Expect = 7.0 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 277 YFFNVVLRFSISFPFFQ*CPRVGPASTVRNLGSLYLING 161 +F NVV +S FPF CP V + ++ L SL+ + G Sbjct: 388 FFLNVVDEYS-RFPFVFPCPDVSTPTVIKCLTSLFTMFG 425 >SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) Length = 421 Score = 28.3 bits (60), Expect = 7.0 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = +2 Query: 161 TID*IQRPEVSYSRSRPHSWTLLEERKGNRESE---DYVEEVYDASQ-YHGQDGLGAYAY 328 T D +QRP RSR + L ER R S D V ++D+ +G+ G+ Sbjct: 136 TADEVQRPRSVILRSRSRTHGDLTERSSRRRSSSVLDRVRRLFDSGDTENGESPTGSSL- 194 Query: 329 GYQTPESAKVENRVRSGDVTGSYIYKDGKNDLVKVR 436 E ++ N V + D + G N+LV +R Sbjct: 195 -PNEGEMSEERNMVLNLDAPMRIPFPIGVNELVAIR 229 >SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) Length = 3094 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +3 Query: 261 TTLKKYTTRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 437 T + T P TTD P T T L +K PET+PA +T + ++ Sbjct: 2279 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 2338 Query: 438 TGQTVTVSTRKTT 476 T T +++TT Sbjct: 2339 TVAPETTVSQETT 2351 >SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1887 Score = 27.9 bits (59), Expect = 9.2 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = +3 Query: 264 TLKKYTTRPNTTDK--TV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 437 T ++ TT+P TT + T+ ++T+ P +R++ A+ T PA T K ++ Sbjct: 1420 TREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTAT--TTVPATKPPTTRKTTTATTT 1477 Query: 438 TGQTVTVSTRKTT 476 G+T TRK T Sbjct: 1478 QGRT----TRKPT 1486 >SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1198 Score = 27.9 bits (59), Expect = 9.2 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Frame = +3 Query: 84 EPEEAQKYL----NSPPFTDPQLAGRTAVLPLIKYND---PRFRTVEAGPTLGHYWKNGK 242 EPE+ + +S F D GR +L +K D PRF TV GP K Sbjct: 632 EPEDTDTHTLTRTDSNMFVDRANDGRVQLLIRVKAKDSSEPRFITVRPGPVEKAIIVRNK 691 Query: 243 EIENLRTTLKKYTTRPNTTD 302 + L + K + T T++ Sbjct: 692 SLSELPSYAKYHVTNITTSE 711 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,452,524 Number of Sequences: 59808 Number of extensions: 473059 Number of successful extensions: 1536 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1527 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2022185256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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