Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00142
(754 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 113 4e-27
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 113 4e-27
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 113 4e-27
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 24 4.4
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 113 bits (273), Expect = 4e-27
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +3
Query: 510 YQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCG 689
YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+
Sbjct: 145 YQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETA 204
Query: 690 VRWKWTAGSADTLFGVGAKY 749
V+ W +GS T FG+GAKY
Sbjct: 205 VQLSWASGSNATKFGMGAKY 224
Score = 106 bits (255), Expect = 6e-25
Identities = 42/91 (46%), Positives = 71/91 (78%)
Frame = +1
Query: 256 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 435
K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 436 DTVAVNTNLDLDLAGPVVDVAAVLTTRVGWL 528
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVAAYQ-GWL 149
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 80 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 259
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 260 LQ*K 271
+ K
Sbjct: 61 YKVK 64
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 113 bits (273), Expect = 4e-27
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +3
Query: 510 YQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCG 689
YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+
Sbjct: 145 YQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETA 204
Query: 690 VRWKWTAGSADTLFGVGAKY 749
V+ W +GS T FG+GAKY
Sbjct: 205 VQLSWASGSNATKFGMGAKY 224
Score = 106 bits (255), Expect = 6e-25
Identities = 42/91 (46%), Positives = 71/91 (78%)
Frame = +1
Query: 256 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 435
K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 436 DTVAVNTNLDLDLAGPVVDVAAVLTTRVGWL 528
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVAAYQ-GWL 149
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 80 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 259
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 260 LQ*K 271
+ K
Sbjct: 61 YKVK 64
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 113 bits (273), Expect = 4e-27
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +3
Query: 510 YQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCG 689
YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+
Sbjct: 145 YQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETA 204
Query: 690 VRWKWTAGSADTLFGVGAKY 749
V+ W +GS T FG+GAKY
Sbjct: 205 VQLSWASGSNATKFGMGAKY 224
Score = 106 bits (255), Expect = 6e-25
Identities = 42/91 (46%), Positives = 71/91 (78%)
Frame = +1
Query: 256 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 435
K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 436 DTVAVNTNLDLDLAGPVVDVAAVLTTRVGWL 528
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVAAYQ-GWL 149
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 80 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 259
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 260 LQ*K 271
+ K
Sbjct: 61 YKVK 64
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 24.2 bits (50), Expect = 4.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 155 FKLDLKTKSESGVEFTSGITSNQ 223
F+LDL+ + ESG + +S IT+ +
Sbjct: 157 FQLDLQLQDESGGDISSFITNGE 179
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,013
Number of Sequences: 2352
Number of extensions: 16121
Number of successful extensions: 235
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -