Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00136
         (534 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TS71 Cluster: ENSANGP00000029024; n=1; Anopheles gamb...    36   0.44 
UniRef50_Q23NK9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q7RFF9 Cluster: Patatin, putative; n=5; Plasmodium (Vin...    33   5.4  
UniRef50_Q81QA6 Cluster: D-alanyl-D-alanine carboxypeptidase fam...    32   9.5  
UniRef50_Q4FSM7 Cluster: Putative uncharacterized protein; n=2; ...    32   9.5  
UniRef50_Q7RXC4 Cluster: Putative uncharacterized protein NCU050...    32   9.5  
UniRef50_A3CXG5 Cluster: Restriction endonuclease; n=1; Methanoc...    32   9.5  

>UniRef50_Q5TS71 Cluster: ENSANGP00000029024; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000029024 - Anopheles gambiae
            str. PEST
          Length = 1214

 Score = 36.3 bits (80), Expect = 0.44
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = -1

Query: 201  KIISKTNKQTNTIQSCREAGL*DFRQLSSELFGIKRRLQ----NS*LHEPSHQKYRLHKR 34
            K + +T+KQ     S  +A   +  +LS EL  I R+LQ    +  LH+ S Q+ R  + 
Sbjct: 972  KELDRTSKQLKKFGSVNQAATDESTRLSQELSSIDRKLQQLEQSRALHDASIQQLRAQRT 1031

Query: 33   DCITRSYNSL 4
            D + R+++S+
Sbjct: 1032 DSLERTFDSV 1041


>UniRef50_Q23NK9 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1816

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
 Frame = -2

Query: 374  ISSEVRSRFTVTGKLVARKSSIPRNNSCDIY----LSSVDDSLPRAPVAAVSSFIAIV*M 207
            +SS  + +  +  +L+A+ + +P+++    Y    +S +  SLP      VSS +  V  
Sbjct: 1067 LSSVNQRKILIIEQLIAQTNLLPKSSFLYTYSNKVISQLQSSLPAQSDTQVSSVLDQVNK 1126

Query: 206  RLRSYPRQTNKQTRYRVAEKQDFKTSDNLVPSFSALNAGSKTLNYTNHPTRNIVS 42
            +L+  P  TN+  +    + Q      NLV SF  +N+ ++ ++Y   PT+  +S
Sbjct: 1127 QLQKQPL-TNQLAKDNNIQLQ------NLVDSFKIINSTTQNISYNLLPTQINIS 1174


>UniRef50_Q7RFF9 Cluster: Patatin, putative; n=5; Plasmodium
            (Vinckeia)|Rep: Patatin, putative - Plasmodium yoelii
            yoelii
          Length = 1852

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 15/49 (30%), Positives = 32/49 (65%)
 Frame = -3

Query: 328  LHENHRFLETTRAISIYRQLMILFPEHQSRLYQASLQSYECV*DHIQDK 182
            + +++ F+E+ R+ S+ R+  +L  +H SR+ +   ++YEC  D++ DK
Sbjct: 1060 IFDDYSFVESYRSASVKRETDLLSNKHSSRVKKR--ETYECDTDNLADK 1106


>UniRef50_Q81QA6 Cluster: D-alanyl-D-alanine carboxypeptidase family
           protein; n=6; Bacillus cereus group|Rep:
           D-alanyl-D-alanine carboxypeptidase family protein -
           Bacillus anthracis
          Length = 243

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -2

Query: 245 VAAVSSFIAIV*MRLRSYPRQTNKQTRYRVAEKQDFKTSDNLVPSFSALNA 93
           +  +  FI      +   PR+TN +TR     K+   TS+N+  SF+++ A
Sbjct: 13  IVILGIFIVYTNQSIGKEPRKTNYETRENSINKEKNSTSNNIASSFASVQA 63


>UniRef50_Q4FSM7 Cluster: Putative uncharacterized protein; n=2;
           Psychrobacter|Rep: Putative uncharacterized protein -
           Psychrobacter arcticum
          Length = 272

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -2

Query: 149 KQDFKTSDNLVPSFSALNAGSKTLNYTNHPTRNIVSIKGIVLRD 18
           K D ++SDN   +  + N  ++TLN  N+  RN  +++G++L D
Sbjct: 165 KNDNESSDNKKITAESDNKEARTLNSFNYALRNKQALQGVILTD 208


>UniRef50_Q7RXC4 Cluster: Putative uncharacterized protein
           NCU05060.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU05060.1 - Neurospora crassa
          Length = 442

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 20  RVIQSLLWRRYFWWDGSCN 76
           RV+  +L R YFWWD  CN
Sbjct: 109 RVLARVLTRAYFWWDDLCN 127


>UniRef50_A3CXG5 Cluster: Restriction endonuclease; n=1;
           Methanoculleus marisnigri JR1|Rep: Restriction
           endonuclease - Methanoculleus marisnigri (strain ATCC
           35101 / DSM 1498 / JR1)
          Length = 547

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 82  VLEPAFNAEKLGTKLSEVLKSCFSATLYR 168
           V +P+ NA +LGTKL E+L S + A  Y+
Sbjct: 65  VAQPSVNAYELGTKLEEILDSIYRAEGYK 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,339,789
Number of Sequences: 1657284
Number of extensions: 9433144
Number of successful extensions: 21758
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21755
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)