Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00136
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089660-1|AAL90398.1|  262|Drosophila melanogaster RH24258p pro...    28   7.0  
AY052036-1|AAK93460.1|  399|Drosophila melanogaster LP03706p pro...    28   9.2  
AE014298-1734|AAF48126.2|  399|Drosophila melanogaster CG1806-PA...    28   9.2  

>AY089660-1|AAL90398.1|  262|Drosophila melanogaster RH24258p
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/57 (21%), Positives = 27/57 (47%)
 Frame = -2

Query: 185 QTNKQTRYRVAEKQDFKTSDNLVPSFSALNAGSKTLNYTNHPTRNIVSIKGIVLRDL 15
           + NKQ   ++  +  +  S+  +P       G  + +YT+   +  +S+K +V+  L
Sbjct: 51  ECNKQGLQQITPRMKYGISELNIPPLDPFEMGKSSYSYTSGLLQGRISMKNVVIHGL 107


>AY052036-1|AAK93460.1|  399|Drosophila melanogaster LP03706p
           protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -3

Query: 325 HENHRFLETTRAISIYRQLMIL 260
           H+NH  L+ TR ++I RQL+++
Sbjct: 183 HKNHDSLQATRNLNISRQLLVM 204


>AE014298-1734|AAF48126.2|  399|Drosophila melanogaster CG1806-PA
           protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -3

Query: 325 HENHRFLETTRAISIYRQLMIL 260
           H+NH  L+ TR ++I RQL+++
Sbjct: 183 HKNHDSLQATRNLNISRQLLVM 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,384,128
Number of Sequences: 53049
Number of extensions: 454332
Number of successful extensions: 1112
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)