Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00135
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 587  KNMLYNFKYLIWISKTYTTGE 649
            KN+  N KY  W++   T GE
Sbjct: 1270 KNLDSNLKYEFWVTAATTIGE 1290


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -2

Query: 603 LYSIFFL*AFSSSVCSDANNGTLIAAGM 520
           ++ +F+L   +S +C++AN   ++  G+
Sbjct: 203 VFDLFYLSKRASDLCNEANKTKILLVGL 230


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +3

Query: 546 YLHHYRLNLRKLIGKICYTTLNTLFGSVKLTLLESHQKCFLQIKKRS 686
           Y HH   +LR   G   +      +  V  ++L SH K    + + S
Sbjct: 242 YKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYS 288


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 421 DSFVSNSLICATLGSFFLLV 362
           D ++   L+C  LG F L++
Sbjct: 100 DQYLLEQLVCEQLGGFLLIL 119


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 188 SSCLIPWKSLSSGLRPSKSACSS 120
           S C+  W+S  S LRP  S  S+
Sbjct: 225 SICIEIWQSSESSLRPRSSQKSA 247


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 590 NMLYNFKYLIWISKTY--TTGESSEVLF 667
           N LY+   L+WI+ T+    G+S  V++
Sbjct: 248 NSLYSLHLLLWITVTFILLVGDSYIVMY 275


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -3

Query: 233 ASPPRSTFDFRNSCLSSCLIPWKSLSSGLRPSKSACSSFSPT*LPSESKSESFS 72
           +SP  ++  + NS  SS   P    S  L   +S CSS  P    + S +  ++
Sbjct: 201 SSPTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYN 254


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 584 RKNMLYNFKYLIWISKTYTTGESSEVL 664
           R  ML +F Y + ++   TT  S EVL
Sbjct: 239 RGTMLSHFAYYVDMANMLTTPLSEEVL 265


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 70 CLNLVPLSFRCLCQ 29
          C+NL  +  RC CQ
Sbjct: 44 CVNLPGVGHRCQCQ 57


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 127 VALFHRHSCRLNQN 86
           VA+F R  C +N+N
Sbjct: 201 VAMFSRKPCSINEN 214


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 127 VALFHRHSCRLNQN 86
           VA+F R  C +N+N
Sbjct: 201 VAMFSRKPCSINEN 214


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 166 SHYLLGYVLRNQPVALFHRHSCRLN 92
           S +++GYV    P+AL ++++   N
Sbjct: 39  SPFVIGYVKHFHPLALSNKNAIDFN 63


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 546 YLHHYRLNLRKLIGKICYTTLNTLFGSVKLTLL 644
           YLH +     KL  ++   +L  LFG+  L+++
Sbjct: 228 YLHQHLSKSVKLFNEVFGVSLLVLFGNSFLSIV 260


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 546 YLHHYRLNLRKLIGKICYTTLNTLFGSVKLTLL 644
           YLH +     KL  ++   +L  LFG+  L+++
Sbjct: 246 YLHQHLSKSVKLFNEVFGVSLLVLFGNSFLSIV 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,238
Number of Sequences: 336
Number of extensions: 2783
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)