Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00135
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0724 - 35757228-35757323,35757837-35757893,35757983-357580... 50 2e-06
06_01_0082 + 656362-657798 32 0.38
05_02_0135 - 6965294-6965875 32 0.38
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 31 0.67
11_06_0289 - 21969248-21973516 30 2.0
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 30 2.0
11_06_0284 + 21909758-21913645 29 2.7
03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467 29 2.7
01_01_0231 + 1951047-1951499 29 2.7
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 29 2.7
01_01_0229 - 1943473-1943922 29 2.7
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 29 3.5
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990... 29 3.5
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453... 29 4.7
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 28 6.2
10_01_0209 + 2236530-2237301,2239196-2239297,2239535-2239716,224... 28 6.2
08_01_0618 - 5394841-5395036,5395179-5395244,5395727-5395769,539... 28 6.2
04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713 28 6.2
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317... 28 6.2
11_06_0185 + 21018045-21022307 28 8.2
08_01_0626 - 5445676-5446687,5447099-5447430 28 8.2
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 8.2
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 28 8.2
03_05_0483 - 24806984-24808324 28 8.2
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 28 8.2
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 28 8.2
>03_06_0724 -
35757228-35757323,35757837-35757893,35757983-35758075,
35758271-35758336,35758444-35758653,35758750-35759022,
35759112-35759251,35759330-35759471
Length = 358
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/81 (35%), Positives = 38/81 (46%)
Frame = +1
Query: 16 KNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQ 195
K E ++ ER D DSD DSD +QADF +P+ DFHG+K LL+
Sbjct: 63 KRAEPSSDEERYSSDDESYSSDSD-DSDDASEELDTVQADFAFYDPKPGDFHGVKLLLKT 121
Query: 196 LFLKSNVDLGGLAQIIISQNT 258
DL G +I+ Q T
Sbjct: 122 YLDSKPWDLTGFVDLILEQTT 142
>06_01_0082 + 656362-657798
Length = 478
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 22 KEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFH 171
K NS R E D D D D +G E++ D E + EDSDF+
Sbjct: 223 KRATNNSSRLDEDDDDDNDDDDDDDEGE---EQQQNNDSEMMDVEDSDFY 269
>05_02_0135 - 6965294-6965875
Length = 193
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 19 NKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 165
+ + D +S+ + DS S+ DSDFD + + + D +G + +D D
Sbjct: 110 DSDSDHDSDSDHDHDSDSDHDSDFDRGSDSDHDSDSNHDIDGDDNDDDD 158
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 22 KEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 165
K++D + + + DS + DSD DSD ++ + + D + DSD
Sbjct: 93 KKLDNDDDDGSDWDSVDDSDSDHDSDSDHDHDSDSDHDSDFDRGSDSD 140
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 466 IYLINSLVLG-SAFS*DSFVSNSLICATLGSFFL 368
+ + +SLVL SA S D + NSLIC +LG FFL
Sbjct: 524 VLMASSLVLFLSAVSPDFVLGNSLICMSLGVFFL 557
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEK-----DSDFDSDGNYVGEKELQADFEGRNPEDSDFH-- 171
++ E+ +E KEQ +G E+ D+D D D N + E + + + + E+ H
Sbjct: 488 EEQNEVRKETEGRKEQVAGEEEEKEDHDADNDEDSNDDDDDEEEEEEDDDDDEEEPIHLH 547
Query: 172 --GIKQLLRQLFLKS 210
+Q+LR++F K+
Sbjct: 548 EDQYEQILREVFTKN 562
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 31 DTNSERTKEQDSGSEKDSDFDSDG-NYVGEKELQADFEGRNPEDSD 165
+ N E + D G E D D D DG + GE E + D E E+ +
Sbjct: 111 EANGEGGSDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEEEEE 156
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD----FHGIK 180
+K + E ++ D + D D+D D E+E + D + + +D D H +
Sbjct: 498 EKEGRKEVGEEEKEDDDDDYDDDDDYDDDDYDDNEEEKKYDDDDDDDDDDDDPIHLHTAQ 557
Query: 181 --QLLRQLFLKS 210
Q+L+++FLK+
Sbjct: 558 YMQILQEVFLKT 569
>03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467
Length = 640
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 1 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEG 144
K NKK K TN ++ K + +D+D D D + +L+A G
Sbjct: 120 KKKNKKKKSKKTNLKQKKAAEPKPPRDTDDDEDDEEEADDDLEALLAG 167
>01_01_0231 + 1951047-1951499
Length = 150
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 367 KEKMNPVWHRSENCLQNYLRRMQIPE 444
KE N WHR E ++RR ++PE
Sbjct: 88 KEDKNDKWHRVERSSGQFMRRFRLPE 113
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 367 KEKMNPVWHRSENCLQNYLRRMQIPE 444
KE N WHR E ++RR ++PE
Sbjct: 88 KEDKNDKWHRVERSSGQFMRRFRLPE 113
>01_01_0229 - 1943473-1943922
Length = 149
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 367 KEKMNPVWHRSENCLQNYLRRMQIPE 444
KE N WHR E ++RR ++PE
Sbjct: 87 KEDKNDKWHRVERSSGQFMRRFRLPE 112
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 KMPNKKNKEIDTNSE-RTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 159
K ++ + E D+ S+ + ++ S DS+ DSDG+Y G+K + G+N D
Sbjct: 306 KKSSRHDSESDSESDHKNARREKSSRHDSESDSDGDY-GKKTTK---HGKNDRD 355
>03_02_0619 +
9904405-9904586,9905315-9906764,9907320-9907509,
9909578-9910164
Length = 802
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 245 IIIWASPPRST-FDFRNSCLSSCLIPWKS 162
I W P R FD N+ LS L PWKS
Sbjct: 695 ISAWPRPERRLLFDLANTVLSEILAPWKS 723
>03_01_0617 +
4532651-4532893,4534713-4534939,4535077-4535150,
4535753-4535809,4535940-4536280,4536979-4537047,
4537152-4537219,4537404-4539569,4540101-4540178,
4540326-4540437,4540722-4540772,4540886-4540936
Length = 1178
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 165
K N + D + + E SGS+ DS+ G+ G + A + DSD
Sbjct: 398 KVNNDSDGKAGSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSD 448
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 165
++ E +S+ + D E +SD DSDG+ E + +D +G + +DSD
Sbjct: 92 REKDEKGEDSDEDESDDDRGEDESDEDSDGD---ESDEHSD-DGESDDDSD 138
>10_01_0209 +
2236530-2237301,2239196-2239297,2239535-2239716,
2240210-2240420,2240526-2240766,2240861-2241011,
2241116-2241424
Length = 655
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 103 NYVGEKELQADFEGRNPEDSDF 168
N GE+EL D EG+NPE S F
Sbjct: 303 NLQGEEELVWDLEGKNPEFSVF 324
>08_01_0618 -
5394841-5395036,5395179-5395244,5395727-5395769,
5396119-5396238,5396653-5396731,5396910-5397177,
5397262-5397305,5397431-5397502,5397756-5397825,
5397929-5397999
Length = 342
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 16 KNKEIDTNSERTKEQDSGSEKDSDFDSD 99
K E D N E +EQD+G E DSDF D
Sbjct: 46 KEDEEDDNYE--EEQDAGDEFDSDFGED 71
>04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713
Length = 236
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 7 PNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGN 105
PN ++ + KE+D G D D+DS+GN
Sbjct: 80 PNTNETKVLRLLKSLKERDGGVYLDEDYDSEGN 112
>01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,
3179892-3179999
Length = 957
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 558 YRLNLRKLIGKICYTTLNTLFGSVKLTLLESHQKCFLQIK 677
+ +NLR+ +G + T F + +++ E CF +IK
Sbjct: 901 FDINLRRQLGALSSKTFEVFFKLINISISEDETVCFNRIK 940
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEK-----DSDFDSDGNYVGEKELQADFEGRNPEDSDFH-- 171
++ E+ +E KEQ +G E+ D+D D D N + E + + E + E+ H
Sbjct: 487 EEQNEVRKETEGRKEQVAGEEEEKEDHDADNDEDSNDDDDDE-EEEEEDDDDEEEPIHLH 545
Query: 172 --GIKQLLRQLFLKS 210
+Q+LR++F K+
Sbjct: 546 EDQYEQILREVFTKN 560
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEK---DSDFDSDGNYVGEKELQADF-EGRNPED 159
++++EI+ + + + D E+ D D D D N V E+E D EG + E+
Sbjct: 229 EEDEEIEEDEDENNDDDDEEEEMEEDEDLDEDKNDVVEEEEDEDMDEGEDDEN 281
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 1 KMPNKKNKEIDTNSERTKEQDSG----SEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 165
K P K + R K+ D E+D+DFD D + E+E+ D E +D D
Sbjct: 99 KRPPKGKPPPRSRRRRQKDDDDDYEEEEEEDADFDPDVDEDDEEEVDEDEEEFEQDDDD 157
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 16 KNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGR 147
K+K+ S TK + S + S DSD + G ++ EGR
Sbjct: 237 KHKKTKRKSRGTKRKSKRSYRSSSDDSDSSKTGGSSSDSESEGR 280
>03_05_0483 - 24806984-24808324
Length = 446
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 10 NKKNKEIDTNSERTKEQDSGS-EKDSDFDSDGNYVGEKE-LQADFEGRNPEDSD 165
+++++E D + E E S ++DSD D D + GEKE ++A R+ EDSD
Sbjct: 382 DEEDEEYDDDEEEDMEAGVASGDEDSD-DDDDDEEGEKEDMEAGVASRD-EDSD 433
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 354 VNITKRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINE 509
+NI + + SV+ I + L LS+ K+L++ ADD+ G NE
Sbjct: 689 ININDQSKQASVSLILDSLKDLSEAELSTIRKQLLEEFSADDACPLGSHSNE 740
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 13 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQA 132
+K KE S K+ + E SD DSDG+ G+K+ +A
Sbjct: 533 EKAKEFVYGSGSRKKSNGKHENSSDDDSDGSCDGKKKKKA 572
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,029,599
Number of Sequences: 37544
Number of extensions: 269968
Number of successful extensions: 1100
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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