Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00134
(723 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 180 1e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 176 2e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 166 2e-43
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 143 1e-36
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 180 bits (438), Expect = 1e-47
Identities = 85/86 (98%), Positives = 85/86 (98%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 430
G GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 109
Query: 431 DCAVLIVAAGTGEFEAGISKNGQTRE 508
DCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 110 DCAVLIVAAGTGEFEAGISKNGQTRE 135
Score = 143 bits (347), Expect = 1e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 690
ALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 196
Query: 691 HGDNMLEPSTK 723
HGDNMLE S+K
Sbjct: 197 HGDNMLEVSSK 207
Score = 109 bits (262), Expect = 3e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 176 bits (429), Expect = 2e-46
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 430
G GSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQA 109
Query: 431 DCAVLIVAAGTGEFEAGISKNGQTRE 508
DCAVLIVAAG GEFEAGISKNGQTRE
Sbjct: 110 DCAVLIVAAGIGEFEAGISKNGQTRE 135
Score = 138 bits (335), Expect = 4e-35
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 690
ALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGW
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGW 196
Query: 691 HGDNMLEPSTK 723
HGDNMLEPS K
Sbjct: 197 HGDNMLEPSPK 207
Score = 109 bits (262), Expect = 3e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 166 bits (404), Expect = 2e-43
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = +2
Query: 275 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 454
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 455 AGTGEFEAGISKNGQTRE 508
AGTGEFEAGISKNGQTRE
Sbjct: 61 AGTGEFEAGISKNGQTRE 78
Score = 143 bits (347), Expect = 1e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 690
ALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 80 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 139
Query: 691 HGDNMLEPSTK 723
HGDNMLE S+K
Sbjct: 140 HGDNMLEVSSK 150
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 143 bits (347), Expect = 1e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 690
ALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 64 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 123
Query: 691 HGDNMLEPSTK 723
HGDNMLE S+K
Sbjct: 124 HGDNMLEVSSK 134
Score = 133 bits (322), Expect = 1e-33
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +2
Query: 323 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 502
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 503 RE 508
RE
Sbjct: 61 RE 62
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.55
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 117 KTHINIVVIGHVDSGKST 170
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 126 INIVVIGHVDSGKST 170
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 448
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 448
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 723 FG*RLQHVVSVPSRNGHESDSSWV 652
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 566 WIPLNHHTVSPDLRKSRRKY 625
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,611
Number of Sequences: 438
Number of extensions: 4268
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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