Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00133
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 60 2e-09
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 52 5e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 50 2e-06
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 50 2e-06
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 50 2e-06
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 48 6e-06
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 48 1e-05
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 41 0.001
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.1
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 29 4.1
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_13975| Best HMM Match : SGS (HMM E-Value=3.4) 28 9.4
SB_9202| Best HMM Match : ig (HMM E-Value=5e-40) 28 9.4
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 298 LGSTIKTEKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKY 474
L + + E DK +I LDV+++ P+EIS+K G + ++ KH + + EHGY + +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKH-KSEGEHGYETSEFHRSY 87
Query: 475 SLPEGAETANVA 510
+LP+G + + V+
Sbjct: 88 NLPDGVDVSTVS 99
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 319 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAE 495
+ DKFQI LDV+ F P+EI+ K G + V + +E G+ S++F R Y+LPEG +
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 496 TANVA 510
++++
Sbjct: 61 ESSIS 65
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 328 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYI-SRQFVRKYSLPEGAETAN 504
KF + LDV F P+E+ VK + V A+ E +EHG+ +RQF R + LP +
Sbjct: 99 KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVDMDT 156
Query: 505 VAP 513
+ P
Sbjct: 157 LVP 159
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 498
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 499 ANV 507
+NV
Sbjct: 63 SNV 65
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 DKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETA 501
D+ +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG E +
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 502 NV 507
NV
Sbjct: 298 NV 299
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 325 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 325 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 382
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 498
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 499 ANV 507
+NV
Sbjct: 63 SNV 65
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 325 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 498
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 499 ANV 507
+NV
Sbjct: 63 SNV 65
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 325 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 498
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 499 ANV 507
+NV
Sbjct: 63 SNV 65
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 325 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 498
++K +I LDV+ + P+EIS K G V V+ +H + G+ ++F R ++LPEG E
Sbjct: 5 ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63
Query: 499 ANV 507
+NV
Sbjct: 64 SNV 66
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 301 GSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSL 480
G+ +++ DKF + +DV+ F P+ I V+ ++V A HE + + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 481 P 483
P
Sbjct: 148 P 148
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 319 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAE 495
+K+ +I LDV+ + P+EIS K G V V+ +H + E G+ ++F R ++LPEG +
Sbjct: 3 KKNTLEIAKLDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGID 61
Query: 496 TANV 507
NV
Sbjct: 62 PENV 65
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 313 KTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLP 483
K ++DKF + +DV F P+ I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLP 147
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 STIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYI-SRQFVRKYSL 480
S + KF + LDV F P+E+ VK + V A+ E +EHG+ +RQF R + L
Sbjct: 19 SAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVL 76
Query: 481 PE 486
P+
Sbjct: 77 PQ 78
>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 310 IKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEH 441
I + D+F I D H DE+ ++T E Y+ + H ++ + H
Sbjct: 45 IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELHTDRNEIH 88
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 NLDVQHFSPDEI--SVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETA 501
++DV S ++I ++ A+G + E+ H DE+G I F++ S E A A
Sbjct: 94 DVDVSSISGEDILRAIDAADGDISGESGHVTDSDENGDIDSSFIKLESSSESAPLA 149
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 328 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEG 489
K +IN D + ++ + + + Y+ AK E + ++G ++ +KY PEG
Sbjct: 730 KLRINADEKEEQEQKVPISSDKRYINGHAKDENETVKNGNMNLDNSQKYFSPEG 783
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 409 EAKHEEKQDEHGYISRQFVRKYSL 480
+ KHEE++D HGY+ + +++L
Sbjct: 70 QVKHEEREDRHGYLKDKVTLQHAL 93
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 142 RMSL*KAARQQTCGSGLRDAANSGRLLNKHDDAVDSSRYFRPWRHTASLARDLGSTIKTE 321
R L K + G + + ANS N H +D P T +++ ++ ST+KT
Sbjct: 208 RDQLIKTGKMTPFGGSINNTANSATADNVHTTTID-----YPTSLTTTISEEMKSTVKTP 262
Query: 322 KDKFQINLD 348
+D N D
Sbjct: 263 EDDDDDNGD 271
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 561 IDDKGERVVPITKTGPVRKESAESKNSKEADPG 659
ID K + V +K+ V K ++ K+SKE DPG
Sbjct: 763 IDAKSKDVRSKSKSKSVEKRTSTEKSSKEPDPG 795
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 190 LRDAANSGRLLNKHDDAVDSSRYFRPWRHTASLARDLGSTIKTEKDKFQINLDVQHFSPD 369
LR AN L + +A D+ R+ + S A STI + +DK + L+ Q SP
Sbjct: 156 LRPGANRPELSPRLSEAKDT-RHSLEYTSDGSRASSRNSTISSIQDKEESGLNGQFHSPP 214
Query: 370 EISVKT 387
V+T
Sbjct: 215 SRDVQT 220
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 226 KHDDAVDSSRYFRPWRHTASLARDLGSTIKTEKDKF 333
+ DD ++ RY RP +LAR T KT +D +
Sbjct: 542 RRDDLINGDRYDRPDSGPQNLARSNSLTRKTSEDTY 577
>SB_13975| Best HMM Match : SGS (HMM E-Value=3.4)
Length = 473
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 226 KHDDAVDSSRYFRPWRHTASLARDLGSTIKTEKDKF 333
+ DD ++ RY RP +LAR T KT +D +
Sbjct: 394 RRDDLINGDRYDRPDSGPQNLARSNSLTRKTSEDTY 429
>SB_9202| Best HMM Match : ig (HMM E-Value=5e-40)
Length = 1604
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 211 GRLLNKHDDAVDSSRYFRP 267
GRLL+ D++ D+ RY+RP
Sbjct: 1447 GRLLDDSDESSDTDRYYRP 1465
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,238,716
Number of Sequences: 59808
Number of extensions: 457026
Number of successful extensions: 1206
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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