Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00132
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    26   0.27 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.62 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
 Frame = +1

Query: 181 NATRRDSFGPPTPL---EPYPCQTRGDITAIDVEPAFVENFPPAQEFEVTPKALVSATSD 351
           NA  +    PP P+   EP P QT       + EP      P        P+   +  S 
Sbjct: 383 NAALKSDEIPPEPVPTPEPQPTQTT------ESEPTQASEQPTESSTTQKPQTTKTPESG 436

Query: 352 YESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEV 453
            ESDG     E  V +P + S  +  VSD  K V
Sbjct: 437 NESDG-VCTKEGIVRDPSDCSVYYTCVSDGSKLV 469


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +1

Query: 181  NATRRDSFGPPTPLEPYPCQTRGDITAIDVEPAFVENFPPAQEFEVTPKALVSATS 348
            N +R D   PP P+ P P Q     T +D   +  E+  P  ++   P    S+T+
Sbjct: 997  NPSREDCTKPPEPVTPAPPQV---TTGVDTGASSTEHMHP--DWTTKPSTWWSSTT 1047


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 468 CSGRCARRLQSASAALHQM 524
           C GRCA  +Q + + + QM
Sbjct: 65  CIGRCASYIQVSGSKIWQM 83


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = -1

Query: 613 QWGASKACIGLTLYLKPVRTRGSMYTPITGI*WSAAEALCKRRAHLP 473
           QW      + L L++ P     + Y  I    WS ++ L     H+P
Sbjct: 202 QWKVYITLVALVLFVFPALIISACYAVIVRTIWSKSKLLIP-VGHIP 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,760
Number of Sequences: 336
Number of extensions: 4113
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)