Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00132
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23511-8|AAU20849.1|  167|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AL033514-10|CAE47472.1|  436|Caenorhabditis elegans Hypothetical...    30   1.4  
AL033514-9|CAA22098.1|  605|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical pr...    30   1.9  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    30   1.9  
U41508-3|AAN39664.1|  317|Caenorhabditis elegans Set (trithorax/...    29   3.3  
U41508-2|AAN39665.2|  552|Caenorhabditis elegans Set (trithorax/...    29   3.3  
Z69385-2|CAA93422.1|  147|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL132949-18|CAB70109.2|  725|Caenorhabditis elegans Hypothetical...    28   7.7  
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U23511-8|AAU20849.1|  167|Caenorhabditis elegans Hypothetical
           protein C32D5.8b protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 719 LSVELWGSNVSLRANPRLSTAESRLYLRTSILASLTVGRIQSLHW 585
           +SV+  G N+SL A  +L   +  L   T  LA   VG   S HW
Sbjct: 19  MSVDPKGKNMSLLAGVKLEKRDKTLVDATEALAGKAVGFYFSAHW 63


>AL033514-10|CAE47472.1|  436|Caenorhabditis elegans Hypothetical
           protein Y75B8A.9b protein.
          Length = 436

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 483
           E D E+A  +  +  P  + K+F T  DR KE+ +D   LG +
Sbjct: 68  EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109


>AL033514-9|CAA22098.1|  605|Caenorhabditis elegans Hypothetical
           protein Y75B8A.9a protein.
          Length = 605

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 483
           E D E+A  +  +  P  + K+F T  DR KE+ +D   LG +
Sbjct: 68  EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 287 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 373
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical
           protein C12D8.5 protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 352 YESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLL 459
           Y  DG E  PE E+PE  E++  FW +  R +  ++
Sbjct: 189 YHCDGAE--PEWEIPEITEITDGFWHLGGRTEHEVM 222


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 287 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 373
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>U41508-3|AAN39664.1|  317|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 20,
           isoform a protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 23  SLATCDEFTYSVILLYCRFVESTVRXIRTNRSRFKILSY*AF*GKMLANSAMEMQREETP 202
           S +  DE TY++ ++Y          I TN+ +  +  Y  F  K   +S +E+   ETP
Sbjct: 126 SSSISDEDTYALDVVYDTDKYQLAAIIDTNKKQKSVKKYPPFVNKKYTSSILEL--HETP 183

Query: 203 LAL 211
           L+L
Sbjct: 184 LSL 186


>U41508-2|AAN39665.2|  552|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 20,
           isoform b protein.
          Length = 552

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 23  SLATCDEFTYSVILLYCRFVESTVRXIRTNRSRFKILSY*AF*GKMLANSAMEMQREETP 202
           S +  DE TY++ ++Y          I TN+ +  +  Y  F  K   +S +E+   ETP
Sbjct: 361 SSSISDEDTYALDVVYDTDKYQLAAIIDTNKKQKSVKKYPPFVNKKYTSSILEL--HETP 418

Query: 203 LAL 211
           L+L
Sbjct: 419 LSL 421


>Z69385-2|CAA93422.1|  147|Caenorhabditis elegans Hypothetical
           protein ZK593.3 protein.
          Length = 147

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 290 FSTNAGSTSMAVMSPRVWHG 231
           F    GST +AV++PRVW G
Sbjct: 61  FLMELGSTPLAVINPRVWFG 80


>Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical
           protein D2013.2 protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 180 KCNAKRLLWPSNAFGTLPVPDSRGHHCHRCGTSV 281
           KCN +   W   A     V   R HHC  CG++V
Sbjct: 294 KCN-QPFFWNLQAMWQRKVVGLRQHHCRTCGSAV 326


>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
           protein ZC434.5 protein.
          Length = 1149

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 441 EKRSITGRRCSGRCARRLQSASAALHQMPVIGVYIDPRVRTGFRYKVRPMQALDAP 608
           +K S  G  C  R    ++S + A+    +     +  VRTG +YKV P      P
Sbjct: 323 KKGSPKGLTCCVRMKIDMKSNNGAMRDPTIYRCKPEEHVRTGLKYKVYPTYDFTCP 378


>AL132949-18|CAB70109.2|  725|Caenorhabditis elegans Hypothetical
           protein Y53F4B.20 protein.
          Length = 725

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 611 VGRIQSLHWSNFVSEAGSDTGVDVHPNNRHLMERC 507
           +G +  ++ S  +  AG    +D HPN   + E+C
Sbjct: 380 LGHLAKIYLSETIFTAGDTLKLDEHPNEFEIFEKC 414


>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +2

Query: 269 WNQRSLKTFLQHRNSKLLLKRLCQQRVTMKATEKRPSLNWRSLSQLRLAKTSGPL 433
           W +   K      N  +L K L Q       T K+P+L+W S  Q +L  T  PL
Sbjct: 771 WLKNRRKHVFCDENLNILPKPLWQSFKKKTKTTKQPTLHWSSPIQKKLKFTVIPL 825


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,268,629
Number of Sequences: 27780
Number of extensions: 397945
Number of successful extensions: 1086
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)